Gene

KWMTBOMO12236  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014192

Annotation

PREDICTED:_myrosinase_1-like_[Bombyx_mori]

Location

Bomo_Chr20(+):10227560-10240537      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.363

CDS

ATGAATCTCTCGTGGCAAGTCGCGTTCAGCGCGCTGATGGCTTGCGCCTGGGGGTCGGATCTAACCTTCCCTCCTGGGTTCAAGTTCGGTGCTGCATCAGCGGCATACCAGATTGAAGGCGGATGGAATGCAAGCGATAAAGGAGAAAGCATATGGGATCGTCTTGTCCATGAAAATCCTGAGATGATAGGGGATCGCAGTAACGGAGACGTGGCCTGCGACTCTTACCATCTCTGGCAGAGAGACATAGAAATTGCATCAGAAATCGGTCTACACTTCTATCGATTCTCTATAGCGTGGACGAGAATTCTACCAACCGGCTTCAGTGATAAGATCAGTGAAGACGGAAAGAATTACTACAATAGACTGATTGATGGGCTGTTGGAGAAAGGGATCAATCCAGTAATTTCAATTTACCACTGGGATCTGCCGCAACAGTTGCAAGACTTGGGTGGCTGGGTAAATCCTCTCATAGTTGACTGGTTCTCTGATTACGCAAGGGTCGTATTCTCTCTATACGCGGACAGAGTGAAGACCTGGATCACCATCAATGAGCCTACTATGATCTGCGATGAATCTTACAACACTGGTTTCTTTGCCCCAGCGATTTTGGAGCCCCATATATCCCCCTATGTATGTGCAAAGAACGTTTTGCTTGCCCATGCTAAGGCTTGGAGGATTTACGACGAGGAATACAGACCAAAGTACAACGGCGAAATAACCTTAGCCAATCATTTGATCTGGTATGAACCTCTGGGTGAAGAAGACTTCGAACTCACTGAATTAGTCCGGCAAAATTTGGTTGGTCGATACTCTCATCCGGTTTATTCAAAGGAGGGAGGTTGGCCGCCATCGCTCGAAAAACACATGGAAGAGGTCAGCAGACGGAAAGGTTTCCAGAGATCAGTCCTGCCTCCTTTCACTCGAGAAGAGATTGACTTAGTAAAAGGCACCTTCGATTTCTACGCCATGAACCATTACACCAGTCGCCTAGTTCGGAAAGCTGAGCCAAGCGAACACATCGGCTCGTTCCCATTGAACGGAGCTCCTGATCTAGAAGCTGTCTTCGAAAAAGACCCGAGTTGGAGCATTACGACTTCCCATTGGTTCTATATTAACCCCGAAGGTATTCGACGGCAGCTGGCCTGGTTGAGGAAAGAGTACGGAGACATCAAATTCTGGATCACAGAAAACGGCTTGTCGACTACCAGCGGCCTAGAAGACAGAGAACGAATCGAATTCTACAGGGATTATCTGAAAGAGGTGCTCCTGGCCATCAACGAGGACGGTCAAAAAGTGACGGGTTACACAGCGTGGACTCTGATGGATAATTTCGAGTGGAACGACGGTTACAATTCGAAATTCGGATTATACGAAGTGAACTTTACTTCCCCGATGCGCACCAGAAGACAACGCGCCTCCGCCCGCTATTACAAGCAGATCATCGACACACATTCAGTACCAAAGAGTCCTTATGACGACCTATGA

Protein

MNLSWQVAFSALMACAWGSDLTFPPGFKFGAASAAYQIEGGWNASDKGESIWDRLVHENPEMIGDRSNGDVACDSYHLWQRDIEIASEIGLHFYRFSIAWTRILPTGFSDKISEDGKNYYNRLIDGLLEKGINPVISIYHWDLPQQLQDLGGWVNPLIVDWFSDYARVVFSLYADRVKTWITINEPTMICDESYNTGFFAPAILEPHISPYVCAKNVLLAHAKAWRIYDEEYRPKYNGEITLANHLIWYEPLGEEDFELTELVRQNLVGRYSHPVYSKEGGWPPSLEKHMEEVSRRKGFQRSVLPPFTREEIDLVKGTFDFYAMNHYTSRLVRKAEPSEHIGSFPLNGAPDLEAVFEKDPSWSITTSHWFYINPEGIRRQLAWLRKEYGDIKFWITENGLSTTSGLEDRERIEFYRDYLKEVLLAINEDGQKVTGYTAWTLMDNFEWNDGYNSKFGLYEVNFTSPMRTRRQRASARYYKQIIDTHSVPKSPYDDL

Similarity

Belongs to the glycosyl hydrolase 1 family.
Belongs to the class-I aminoacyl-tRNA synthetase family.

Uniprot

H9JXC7   A0A2W1BMB0   A0A2H1VC49   A0A2W1BC39   A0A2A4IWH6   A0A2A4J905   + More
A0A194QH27   A0A3S2N597   A0A2H1W6N8   A0A194QFC2   H9JX79   A0A194QFH9   A0A3G1T1E9   A0A2A4IZ96   A0A2W1BJB1   A0A2W1BEU6   H9JXC6   H9JXC5   A0A2H1WLB6   A0A2H1WLJ0   A0A194QLC3   H9JX80   A0A0N1IBS6   A0A194R3H3   A0A194PPG4   G9F9G9   A0A3S2PE71   A0A2H1WZM4   A0A194PMT2   B0WNN7   A0A2H1VWC6   A0A1Y9J0B2   Q16WF2   A0A182G2R2   A0A1Y9GLV6   A0A1S4G3W5   A0A0K8TUT8   Q5TQY8   A0A1Y9IS68   A0A1Y9GKT0   A0A182U0B4   Q16ET6   A0A1Y9IRY8   Q7Q5I1   A0A194R360   H9IZH5   A0A212FBG8   A0A212FF93   G9F9I3   A0A1L8DQN1   H9JXB3   A0A212F3C5   A0A1Y9IW73   G9F9H3   A0A3S2NZ22   A0A212FF90   A0A194PVV9   A0A2A4JTU1   A0A182HAK7   A0A2H1VX30   Q16WF4   A0A1A9XR01   W5JPB7   A0A1L8DR18   A0A1Q3FR87   A0A1L8DQS5   A0A1W4W814   A0A182YP84   A0A1B0C2P0   A0A2H1VF65   A0A194R3H6   A0A194PPG9   A0A2W1BWF3   V5GII4   A0A182LL23   A0A194RQF8   A0A2J7PTK4   D6X3T6   A0A182JGM2   A0A1A9W4X6   W5JKR6   A0A0T6B9C6   A0A2A4JPS5   Q16WF5   A0A1A9UP13   A0A194PNS3   H9JLY5   A0A1A9ZLX0   A0A194PMT8   A0A194R8P7   B0WNN5   A0A1Y9IVG9   A0A194R400   A0A1Y1K2R8   A0A0B5EKM7   A0A0S7EMZ9   A0A1Y9J100   W5JK33   A0A1W4UV58   A0A1Q3FY94  

Pubmed

19121390    28756777    26354079    17510324    26483478    12364791    + More
14747013    17210077    22118469    20920257    23761445    25244985    20966253    18362917    19820115    28004739    25596091   

EMBL

BABH01035838    BABH01035839    KZ150152    PZC72823.1    ODYU01001752    SOQ38385.1    + More
PZC72822.1    NWSH01005512    PCG64155.1    NWSH01002416    PCG68339.1    KQ459053    KPJ04240.1    RSAL01000405    RVE41892.1    ODYU01006661    SOQ48703.1    KPJ04243.1    BABH01035825    KPJ04242.1    MG992371    AXY94809.1    NWSH01004417    PCG65145.1    PZC72820.1    PZC72831.1    BABH01035833    BABH01035834    BABH01035835    BABH01035826    BABH01035827    ODYU01009444    SOQ53875.1    SOQ53877.1    KPJ04241.1    BABH01035816    BABH01035817    KQ461157    KPJ08092.1    KQ460779    KPJ12242.1    KQ459598    KPI94624.1    JN033714    AEW46867.1    RSAL01000077    RVE48784.1    ODYU01012291    SOQ58525.1    KPI94627.1    DS232013    EDS31873.1    ODYU01004836    SOQ45125.1    CH477568    EAT38910.1    JXUM01040979    KQ561266    KXJ79157.1    APCN01002262    GBUI01000001    JAI18234.1    AAAB01008960    EAL40075.2    CH478582    EAT32750.1    EAA11668.3    KPJ12243.1    BABH01014157    AGBW02009344    OWR51063.1    AGBW02008847    OWR52397.1    JN033728    AEW46881.1    GFDF01005306    JAV08778.1    BABH01035726    AGBW02010585    OWR48224.1    JN033718    AEW46871.1    RSAL01000019    RVE52748.1    OWR52398.1    KQ459589    KPI97521.1    NWSH01000598    PCG75431.1    JXUM01031352    KQ560919    KXJ80348.1    ODYU01004975    SOQ45390.1    EAT38908.1    ADMH02000892    ETN64735.1    GFDF01005304    JAV08780.1    GFDL01004884    JAV30161.1    GFDF01005305    JAV08779.1    JXJN01024604    JXJN01024605    JXJN01024606    ODYU01001971    SOQ38904.1    KPJ12247.1    KPI94629.1    KZ149936    PZC77130.1    GALX01004592    JAB63874.1    KQ459875    KPJ19634.1    NEVH01021237    PNF19655.1    KQ971326    EEZ97373.2    ETN64736.1    LJIG01003002    KRT83938.1    NWSH01000819    PCG74065.1    EAT38907.1    KPI94633.1    BABH01005438    KPI94632.1    KPJ12246.1    EDS31871.1    KPJ12249.1    GEZM01098374    GEZM01098373    JAV53905.1    KP068693    AJE75664.1    GBUH01000007    JAO03635.1    ETN64737.1    GFDL01002519    JAV32526.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000283053    UP000053240    UP000002320    + More
UP000076407    UP000008820    UP000069940    UP000249989    UP000075840    UP000007062    UP000075903    UP000075902    UP000007151    UP000075920    UP000092443    UP000000673    UP000192223    UP000076408    UP000092460    UP000075882    UP000235965    UP000007266    UP000075880    UP000091820    UP000078200    UP000092445    UP000192221   

PRIDE

H9JXC7    H9JX79    H9JXC6    H9JXC5    H9JX80    H9IZH5    + More
H9JXB3    H9JLY5   

Pfam

PF00232   Glyco_hydro_1        + More
PF00501   AMP-binding
PF13193   AMP-binding_C
PF00133   tRNA-synt_1

Interpro

IPR017853   Glycoside_hydrolase_SF        + More
IPR001360   Glyco_hydro_1       
IPR033132   Glyco_hydro_1_N_CS       
IPR018120   Glyco_hydro_1_AS       
IPR000873   AMP-dep_Synth/Lig       
IPR025110   AMP-bd_C       
IPR002300   aa-tRNA-synth_Ia       
IPR014729   Rossmann-like_a/b/a_fold       
IPR001412   aa-tRNA-synth_I_CS       
IPR009008   Val/Leu/Ile-tRNA-synth_edit       
IPR002301   Ile-tRNA-ligase       

SUPFAM

SSF51445   SSF51445        + More
SSF50677   SSF50677       

Gene 3D

3.40.50.620     3.90.740.10    

ProteinModelPortal

H9JXC7   A0A2W1BMB0   A0A2H1VC49   A0A2W1BC39   A0A2A4IWH6   A0A2A4J905   + More
A0A194QH27   A0A3S2N597   A0A2H1W6N8   A0A194QFC2   H9JX79   A0A194QFH9   A0A3G1T1E9   A0A2A4IZ96   A0A2W1BJB1   A0A2W1BEU6   H9JXC6   H9JXC5   A0A2H1WLB6   A0A2H1WLJ0   A0A194QLC3   H9JX80   A0A0N1IBS6   A0A194R3H3   A0A194PPG4   G9F9G9   A0A3S2PE71   A0A2H1WZM4   A0A194PMT2   B0WNN7   A0A2H1VWC6   A0A1Y9J0B2   Q16WF2   A0A182G2R2   A0A1Y9GLV6   A0A1S4G3W5   A0A0K8TUT8   Q5TQY8   A0A1Y9IS68   A0A1Y9GKT0   A0A182U0B4   Q16ET6   A0A1Y9IRY8   Q7Q5I1   A0A194R360   H9IZH5   A0A212FBG8   A0A212FF93   G9F9I3   A0A1L8DQN1   H9JXB3   A0A212F3C5   A0A1Y9IW73   G9F9H3   A0A3S2NZ22   A0A212FF90   A0A194PVV9   A0A2A4JTU1   A0A182HAK7   A0A2H1VX30   Q16WF4   A0A1A9XR01   W5JPB7   A0A1L8DR18   A0A1Q3FR87   A0A1L8DQS5   A0A1W4W814   A0A182YP84   A0A1B0C2P0   A0A2H1VF65   A0A194R3H6   A0A194PPG9   A0A2W1BWF3   V5GII4   A0A182LL23   A0A194RQF8   A0A2J7PTK4   D6X3T6   A0A182JGM2   A0A1A9W4X6   W5JKR6   A0A0T6B9C6   A0A2A4JPS5   Q16WF5   A0A1A9UP13   A0A194PNS3   H9JLY5   A0A1A9ZLX0   A0A194PMT8   A0A194R8P7   B0WNN5   A0A1Y9IVG9   A0A194R400   A0A1Y1K2R8   A0A0B5EKM7   A0A0S7EMZ9   A0A1Y9J100   W5JK33   A0A1W4UV58   A0A1Q3FY94  

PDB

5CG0     E-value=5.39007e-116,     Score=1069

KEGG

101741385    no KO assigned | (RefSeq) myrosinase 1-like

GO

GO:0004553   GO:0005975   GO:0016021   GO:0008152   GO:0016798   GO:0008422   GO:0002161   GO:0006428   GO:0004822   GO:0005524   GO:0005737   GO:0004812   GO:0000049  

PANTHER

PTHR10353  

SignalP

Position:   1 - 18,         Likelihood:  0.981244

 

 

Length:

495

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.895589999999998

Exp number, first 60 AAs:

0.89381

Total prob of N-in:

0.04605

outside

1  -  495

 

 

Pi

26.31266

Theta

197.677613

Tajima's D

0.064221

CLR

0.273766

CSRT

0.388780560971951

Interpretation

Uncertain