Gene

KWMTBOMO12233

Pre Gene Modal

BGIBMGA014191

Annotation

PREDICTED:_myrosinase_1-like_[Papilio_xuthus]

Location

Bomo_Chr20(+):10196990-10205159      View in EpiBrowser

Location in the cell

Lysosomal   Reliability : 1.938

CDS

ATGCTTGTAGAACTAGGCGTACACTTTTATAGGTTCTCAATATCCTGGCCACGAGTTCTGCCCACCGGTTTTCCAAACTACATCAGCGAAGATGGAGTTAAATATTATAATACTTTGATAAATGCGTTGTTGGAAAACGGAATAGAGCCCTTGGTTACTTTGTACCATTGGGACCTTCCACAGAGACTCCAGGACTTAGGAGGCTGGACGAATCCTCACATCGCAGAATGGTTCGAAAATTACGCCAGAACAGCCTTCGAGTTATTTGGCGACAGAGTGAAGACTTGGATCACGATTAATGAGCCTTTCGTCGTTTGCGACATGGCGTACAACACTGGTCTGGTGGCTCCTGGGATCATTGATCCTGAAATTGCACCATATCTGTGCAATAAATACACGTTGATGGCCCACGCGAGAGCCTGGAGACTTTACGATAAGGAGTTCAGACATAAATATCATGGTAAAATCTCCATCGCGAACCAATTGTTTTGGTTTCAGCCTCTTACTGATGAAGATAAAGAAGTCACTGAACTAGCATTGGAGAATTGTGTCGGTCGGTACTCTCATCCAATTTACTCTAAGAAAGGTGGATGGCCGCCGAGCATAGAGAAAACTATCCATGACAATAGTCGAAGACAAGGGTACCTGAAGTCAAATTTACCCGTTCTGACTAAGCAAGAGATTGAGTACATCAAGGGTACCTATGACTTCTTTGGACTGAATCACTACACAAGTCGCTTGGTCCGAAAAGCCGAGACTGGCGAGAAGCTGAGTCCCTGGCCCATAGGGGATGCTCCTGATTTCGATGCTCGACTTCTAGTTTCGCCGCACTGGCCCAAGACTTCATCTTCTTGGTTTTTTGTCAACCCACCAGGGATAAGAAAACTGCTGCAGTGGTTGAAGAAAAATTACGGCGATCTTACAGTTTTAGTAACGGAAAACGGATTTCCGAATCTTGGTGGCGTGGAGGATGTTGACCGAATAAACTATTACAGAGATAATATGCATGAGATTCTCCTGGCTATCAAAAAAGACAAAATCAACGTAACCGCATACACGGCTTGGACGCTGATGGACAACTACGAATGGATGGATGGATACAAGTGA

Protein

MLVELGVHFYRFSISWPRVLPTGFPNYISEDGVKYYNTLINALLENGIEPLVTLYHWDLPQRLQDLGGWTNPHIAEWFENYARTAFELFGDRVKTWITINEPFVVCDMAYNTGLVAPGIIDPEIAPYLCNKYTLMAHARAWRLYDKEFRHKYHGKISIANQLFWFQPLTDEDKEVTELALENCVGRYSHPIYSKKGGWPPSIEKTIHDNSRRQGYLKSNLPVLTKQEIEYIKGTYDFFGLNHYTSRLVRKAETGEKLSPWPIGDAPDFDARLLVSPHWPKTSSSWFFVNPPGIRKLLQWLKKNYGDLTVLVTENGFPNLGGVEDVDRINYYRDNMHEILLAIKKDKINVTAYTAWTLMDNYEWMDGYK

Similarity

Belongs to the glycosyl hydrolase 1 family.
Belongs to the class-I aminoacyl-tRNA synthetase family.

Uniprot

H9JXC6   A0A2A4J905   A0A2W1BMB0   A0A2H1VC49   A0A2H1W6N8   A0A2W1BC39   + More
A0A2A4IWH6   A0A194QH27   A0A194QFH9   H9JXC7   A0A3G1T1E9   A0A194QFC2   H9JX79   H9JXC5   A0A3S2N597   A0A2W1BEU6   A0A2A4IZ96   G9F9G6   A0A2H1WLJ0   A0A2H1WLB6   A0A194QLC3   A0A2W1BJB1   A0A2W1BD53   A0A0N1I6T9   H9JX83   A0A0N1IBS6   A0A212FIL5   A0A2H1VX30   A0A194R3H3   A0A194PPG4   A0A1Q3FR87   A0A2H1V873   A0A1B6E1F2   A0A1B6D5W8   A0A0T6B9C6   B0WNN7   A0A2A4JEG9   A0A3S2PE71   Q5TQY8   A0A182U0B4   A0A1Y9IRY8   D0VYS1   A0A1Y9GKT0   A0A1Y9J100   G9F9I3   A0A2H1WZM4   D5KQK3   H9JX80   A0A1Y1K2R8   H9IZH5   A0A1S4FLR9   A0A182GJ50   A0A212F963   A0A212EKQ3   D0VYR5   A0A194PMG8   D0VYR6   G9F9G9   D0VYR8   Q16WF2   A0A182QI13   D0VYS0   A0A1S4G3W5   A0A2M3ZET6   A0A194PVV9   A0A1Y9IW73   A0A2M4BKN2   Q16ET6   W5JN46   H9JXC4   A0A212EXF2   A0A212FF93   A0A194R3H6   A0A212FF90   A0A2J7PTJ0   A0A182HAK7   Q8T0W7   S5SP57   A0A2W1BNB0   A0A182J417   A0A182LL23   D2X5V7   A0A3S2TR57   A0A194R360   A0A194QDS5   A0A0N1PFL9   D0VYR9   H9JLY4   A0A194PMT2   A0A2H1VWC6   G9F9I2   D9ILU1   A0A1B0CB38   D6X3T6   A0A1Y1KBB7   A0A182YP84   A0A212FBG8   H9JLY5   A0A2J7PKH6   A0A165G9G6  

Pubmed

19121390    28756777    26354079    22118469    12364791    14747013    + More
17210077    19944757    28004739    17510324    26483478    20920257    23761445    12429120    20682343    22751668    23917163    20966253    20558291    18362917    19820115    25244985   

EMBL

BABH01035833    BABH01035834    BABH01035835    NWSH01002416    PCG68339.1    KZ150152    + More
PZC72823.1    ODYU01001752    SOQ38385.1    ODYU01006661    SOQ48703.1    PZC72822.1    NWSH01005512    PCG64155.1    KQ459053    KPJ04240.1    KPJ04242.1    BABH01035838    BABH01035839    MG992371    AXY94809.1    KPJ04243.1    BABH01035825    BABH01035826    BABH01035827    RSAL01000405    RVE41892.1    PZC72831.1    NWSH01004417    PCG65145.1    JN033711    AEW46864.1    ODYU01009444    SOQ53877.1    SOQ53875.1    KPJ04241.1    PZC72820.1    KZ150122    PZC73162.1    KQ461157    KPJ08090.1    BABH01035811    BABH01035812    KPJ08092.1    AGBW02008370    OWR53561.1    ODYU01004975    SOQ45390.1    KQ460779    KPJ12242.1    KQ459598    KPI94624.1    GFDL01004884    JAV30161.1    ODYU01001184    SOQ37050.1    GEDC01005540    JAS31758.1    GEDC01016220    JAS21078.1    LJIG01003002    KRT83938.1    DS232013    EDS31873.1    NWSH01001829    PCG69984.1    RSAL01000077    RVE48784.1    AAAB01008960    EAL40075.2    AB508960    BAI50024.1    APCN01002262    JN033728    AEW46881.1    ODYU01012291    SOQ58525.1    GU591172    ADD92156.1    BABH01035816    BABH01035817    GEZM01098374    GEZM01098373    JAV53905.1    BABH01014157    JXUM01012550    JXUM01012551    JXUM01012552    KQ560357    KXJ82853.1    AGBW02009638    OWR50268.1    AGBW02014221    OWR42063.1    AB508954    AB508956    BAI50018.1    BAI50020.1    KPI94631.1    AB508955    BAI50019.1    JN033714    AEW46867.1    AB508957    BAI50021.1    CH477568    EAT38910.1    AXCN02000455    AB508959    BAI50023.1    GGFM01006254    MBW27005.1    KQ459589    KPI97521.1    GGFJ01004382    MBW53523.1    CH478582    EAT32750.1    ADMH02000892    ETN64738.1    BABH01035821    AGBW02011758    OWR46178.1    AGBW02008847    OWR52397.1    KPJ12247.1    OWR52398.1    NEVH01021237    PNF19653.1    JXUM01031352    KQ560919    KXJ80348.1    AB073638    BAB91145.1    KC891004    AGS32242.1    PZC73163.1    GQ911585    ADB23476.1    RSAL01000018    RVE52880.1    KPJ12243.1    KQ459144    KPJ03612.1    KPJ08091.1    AB508958    BAI50022.1    BABH01005437    KPI94627.1    ODYU01004836    SOQ45125.1    JN033727    AEW46880.1    HM152540    ADK12988.1    AJWK01004788    AJWK01004789    AJWK01004790    KQ971326    EEZ97373.2    GEZM01089030    GEZM01089029    JAV57758.1    AGBW02009344    OWR51063.1    BABH01005438    NEVH01024540    PNF16838.1    KU886065    AMY26906.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000283053    UP000053240    UP000007151    + More
UP000002320    UP000007062    UP000075902    UP000075903    UP000075840    UP000076407    UP000069940    UP000249989    UP000008820    UP000075886    UP000075920    UP000000673    UP000235965    UP000075880    UP000075882    UP000092461    UP000007266    UP000076408   

PRIDE

H9JXC6    H9JXC7    H9JX79    H9JXC5    H9JX83    H9JX80    + More
H9IZH5    H9JXC4    H9JLY4    H9JLY5   

Pfam

PF00232   Glyco_hydro_1        + More
PF00501   AMP-binding
PF13193   AMP-binding_C
PF00133   tRNA-synt_1
PF01557   FAA_hydrolase

Interpro

IPR033132   Glyco_hydro_1_N_CS        + More
IPR001360   Glyco_hydro_1       
IPR017853   Glycoside_hydrolase_SF       
IPR018120   Glyco_hydro_1_AS       
IPR000873   AMP-dep_Synth/Lig       
IPR025110   AMP-bd_C       
IPR002300   aa-tRNA-synth_Ia       
IPR014729   Rossmann-like_a/b/a_fold       
IPR001412   aa-tRNA-synth_I_CS       
IPR009008   Val/Leu/Ile-tRNA-synth_edit       
IPR002301   Ile-tRNA-ligase       
IPR011234   Fumarylacetoacetase-like_C       
IPR036663   Fumarylacetoacetase_C_sf       

SUPFAM

SSF51445   SSF51445        + More
SSF50677   SSF50677       
SSF56529   SSF56529       

Gene 3D

3.40.50.620     3.90.740.10     3.90.850.10    

ProteinModelPortal

H9JXC6   A0A2A4J905   A0A2W1BMB0   A0A2H1VC49   A0A2H1W6N8   A0A2W1BC39   + More
A0A2A4IWH6   A0A194QH27   A0A194QFH9   H9JXC7   A0A3G1T1E9   A0A194QFC2   H9JX79   H9JXC5   A0A3S2N597   A0A2W1BEU6   A0A2A4IZ96   G9F9G6   A0A2H1WLJ0   A0A2H1WLB6   A0A194QLC3   A0A2W1BJB1   A0A2W1BD53   A0A0N1I6T9   H9JX83   A0A0N1IBS6   A0A212FIL5   A0A2H1VX30   A0A194R3H3   A0A194PPG4   A0A1Q3FR87   A0A2H1V873   A0A1B6E1F2   A0A1B6D5W8   A0A0T6B9C6   B0WNN7   A0A2A4JEG9   A0A3S2PE71   Q5TQY8   A0A182U0B4   A0A1Y9IRY8   D0VYS1   A0A1Y9GKT0   A0A1Y9J100   G9F9I3   A0A2H1WZM4   D5KQK3   H9JX80   A0A1Y1K2R8   H9IZH5   A0A1S4FLR9   A0A182GJ50   A0A212F963   A0A212EKQ3   D0VYR5   A0A194PMG8   D0VYR6   G9F9G9   D0VYR8   Q16WF2   A0A182QI13   D0VYS0   A0A1S4G3W5   A0A2M3ZET6   A0A194PVV9   A0A1Y9IW73   A0A2M4BKN2   Q16ET6   W5JN46   H9JXC4   A0A212EXF2   A0A212FF93   A0A194R3H6   A0A212FF90   A0A2J7PTJ0   A0A182HAK7   Q8T0W7   S5SP57   A0A2W1BNB0   A0A182J417   A0A182LL23   D2X5V7   A0A3S2TR57   A0A194R360   A0A194QDS5   A0A0N1PFL9   D0VYR9   H9JLY4   A0A194PMT2   A0A2H1VWC6   G9F9I2   D9ILU1   A0A1B0CB38   D6X3T6   A0A1Y1KBB7   A0A182YP84   A0A212FBG8   H9JLY5   A0A2J7PKH6   A0A165G9G6  

PDB

3VII     E-value=1.20238e-92,     Score=867

KEGG

101741245    no KO assigned | (RefSeq) myrosinase 1

GO

GO:0005975   GO:0004553   GO:0016021   GO:0002161   GO:0006428   GO:0004822   GO:0005524   GO:0008152   GO:0016798   GO:0008422   GO:0102483   GO:0005737   GO:0004812   GO:0000049  

PANTHER

PTHR10353  

Length:

368

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00772999999999999

Exp number, first 60 AAs:

0.00414

Total prob of N-in:

0.00237

outside

1  -  368

 

 

Pi

200.521211

Theta

131.873578

Tajima's D

1.332427

CLR

0.436804

CSRT

0.741412929353532

Interpretation

Uncertain