Gene

KWMTBOMO12229  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014144

Annotation

PREDICTED:_myrosinase_1-like_[Bombyx_mori]

Location

Bomo_Chr20(-):10116963-10121409      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.559

CDS

ATGTCGTACAGCGATAGTAATCTGGCCCCTGGAATCGAATCCATTGAATTAGGAAATTATTTGTGTGCCAAGAATGTTTTGTTAGCTCATGCCACAGCTTGGAGGATTTATGATGAGGAGTTCAGACCGAAGTATCACGGTAAAGTTTCCTTGACGAACATTTTGATATGGTATGAACCAACTACGGGCAACGATAGTAACCTTGGTAACTTGGCGAACCAGTTGTGTAATGGAATATATACGCATCCGATTTTCTCGAAAACTGGTAACTGGCCACAGTCTGTTATAAAAATAGTGGACGAAAGAAGCAAATTGTTGGGATATCCTTACTCTCTTCTTCCTGAGTTTACTAAAAAAGAAATAGAATTTATAAAAGGTACTTACGACTTCTTCGGAATGAATTACTACATTTCAAAGTCAATAAGGAAGTCCCTGGTAAATGAACATATACCGTTGTGGCCTCTTGAGGGAGTACCGATATTGGGAGCCATTTTGGAAAGTCAACCCACTTGGACGAGCGGAGCTACGAAGTGGTTTTCGGTAAAATACATTTGTTTTTACGTACCTTAA

Protein

MSYSDSNLAPGIESIELGNYLCAKNVLLAHATAWRIYDEEFRPKYHGKVSLTNILIWYEPTTGNDSNLGNLANQLCNGIYTHPIFSKTGNWPQSVIKIVDERSKLLGYPYSLLPEFTKKEIEFIKGTYDFFGMNYYISKSIRKSLVNEHIPLWPLEGVPILGAILESQPTWTSGATKWFSVKYICFYVP

Similarity

Belongs to the glycosyl hydrolase 1 family.
Belongs to the class-I aminoacyl-tRNA synthetase family.

Uniprot

H9JX79   H9JXC5   A0A194QLC3   A0A2H1VC49   G9F9G6   H9JXC7   + More
A0A194QH27   A0A2A4J905   A0A2W1BMB0   A0A0N1PFL9   A0A2A4IWH6   A0A2W1BC39   H9JXC6   A0A0N1IBS6   A0A194QFH9   A0A3G1T1E9   A0A2A4IZ96   H9JXC2   A0A3S2N597   A0A2W1BEU6   A0A2H1W6N8   A0A2H1WLJ0   A0A194QFC2   A0A2W1BJB1   H9JXC4   A0A2H1WZM4   A0A2H1WLB6   A0A2H1VX30   V5GUF1   V5GII4   V5GSR2   A0A212FBG8   A0A212FIL5   A0A0K8TUU4   D0VYR9   A0A3S2NZ50   D0VYS0   A0A194R3H6   A0A194PPG4   A0A0B5EM11   H9JX80   D0VYR8   H9JX83   A0A194R3H3   D0VYS1   D0VYR6   A0A194PMG8   G9F9G9   A0A0B5EKM7   A0A194QDS5   D0VYR5   A0A059U9B2   D2X5V7   S5SP57   A0A194R3Z4   A0A194R8P7   B0WNN7   A0A1Q3FR87   X2CIK2   A0A059UAE7   D6WPV3   A0A3S2PE71   G9F9I3   A0A212FF90   A0A060NZS1   A0A212FF93   V5I949   A0A1W4WG49   A0A0S7EMZ9   N6TKX9   J3JV61   V5I873   A0A2A4JPN8   A0A0N1I6T9   A0A1L8DQN1   D9ILU1   A0A1L8DQS5   A0A194PU18   A0A1L8DR18   A0A2A4JEG9   A0A2M4BKN2   A0A2H1V873   A0A212EXF2   A0A2H1VVL0   A0A194PMT8   A0A1S4FLR9   A0A2M3ZET6   A0A059U5M3   S4NTM4   A0A2A4JPS5   A0A1B0CB38   V5GH04   A0A1W4WMX7   A0A2W1BD53   W5JN46   A0A165G9G6   A0A1B0DHF5  

Pubmed

19121390    26354079    28756777    22118469    19944757    25596091    + More
24799680    23917163    18362917    19820115    24831179    23537049    22516182    20558291    17510324    23622113    20920257    23761445   

EMBL

BABH01035825    BABH01035826    BABH01035827    KQ459053    KPJ04241.1    ODYU01001752    + More
SOQ38385.1    JN033711    AEW46864.1    BABH01035838    BABH01035839    KPJ04240.1    NWSH01002416    PCG68339.1    KZ150152    PZC72823.1    KQ461157    KPJ08091.1    NWSH01005512    PCG64155.1    PZC72822.1    BABH01035833    BABH01035834    BABH01035835    KPJ08092.1    KPJ04242.1    MG992371    AXY94809.1    NWSH01004417    PCG65145.1    BABH01035819    BABH01035820    RSAL01000405    RVE41892.1    PZC72831.1    ODYU01006661    SOQ48703.1    ODYU01009444    SOQ53877.1    KPJ04243.1    PZC72820.1    BABH01035821    ODYU01012291    SOQ58525.1    SOQ53875.1    ODYU01004975    SOQ45390.1    GALX01004593    JAB63873.1    GALX01004592    JAB63874.1    GALX01005183    JAB63283.1    AGBW02009344    OWR51063.1    AGBW02008370    OWR53561.1    GBUI01000003    JAI18232.1    AB508958    BAI50022.1    RSAL01000019    RVE52797.1    AB508959    BAI50023.1    KQ460779    KPJ12247.1    KQ459598    KPI94624.1    KP068699    AJE75670.1    BABH01035816    BABH01035817    AB508957    BAI50021.1    BABH01035811    BABH01035812    KPJ12242.1    AB508960    BAI50024.1    AB508955    BAI50019.1    KPI94631.1    JN033714    AEW46867.1    KP068693    AJE75664.1    KQ459144    KPJ03612.1    AB508954    AB508956    BAI50018.1    BAI50020.1    KF377835    AHZ59653.1    GQ911585    ADB23476.1    KC891004    AGS32242.1    KPJ12244.1    KPJ12246.1    DS232013    EDS31873.1    GFDL01004884    JAV30161.1    KC533772    AGP76180.1    KF377848    AHZ59666.1    KQ971354    EFA06168.1    RSAL01000077    RVE48784.1    JN033728    AEW46881.1    AGBW02008847    OWR52398.1    AB915865    BAO85043.1    OWR52397.1    GALX01003555    JAB64911.1    GBUH01000007    JAO03635.1    APGK01033064    APGK01033065    APGK01033066    KB740860    ENN78593.1    BT127127    AEE62089.1    GALX01005185    JAB63281.1    NWSH01000883    PCG73726.1    KPJ08090.1    GFDF01005306    JAV08778.1    HM152540    ADK12988.1    GFDF01005305    JAV08779.1    KPI94630.1    GFDF01005304    JAV08780.1    NWSH01001829    PCG69984.1    GGFJ01004382    MBW53523.1    ODYU01001184    SOQ37050.1    AGBW02011758    OWR46178.1    ODYU01004710    SOQ44881.1    KPI94632.1    GGFM01006254    MBW27005.1    KF377834    AHZ59652.1    GAIX01010404    JAA82156.1    NWSH01000819    PCG74065.1    AJWK01004788    AJWK01004789    AJWK01004790    GALX01005182    JAB63284.1    KZ150122    PZC73162.1    ADMH02000892    ETN64738.1    KU886065    AMY26906.1    AJVK01061043   

Proteomes

UP000005204    UP000053268    UP000218220    UP000053240    UP000283053    UP000007151    + More
UP000002320    UP000007266    UP000192223    UP000019118    UP000092461    UP000000673    UP000092462   

PRIDE

H9JX79    H9JXC5    H9JXC7    H9JXC6    H9JXC2    H9JXC4    + More
H9JX80    H9JX83   

Pfam

PF00232   Glyco_hydro_1        + More
PF00501   AMP-binding
PF13193   AMP-binding_C
PF00133   tRNA-synt_1
PF01557   FAA_hydrolase

Interpro

IPR017853   Glycoside_hydrolase_SF        + More
IPR001360   Glyco_hydro_1       
IPR033132   Glyco_hydro_1_N_CS       
IPR018120   Glyco_hydro_1_AS       
IPR000873   AMP-dep_Synth/Lig       
IPR025110   AMP-bd_C       
IPR002300   aa-tRNA-synth_Ia       
IPR014729   Rossmann-like_a/b/a_fold       
IPR001412   aa-tRNA-synth_I_CS       
IPR009008   Val/Leu/Ile-tRNA-synth_edit       
IPR002301   Ile-tRNA-ligase       
IPR011234   Fumarylacetoacetase-like_C       
IPR036663   Fumarylacetoacetase_C_sf       

SUPFAM

SSF51445   SSF51445        + More
SSF50677   SSF50677       
SSF56529   SSF56529       

Gene 3D

3.40.50.620     3.90.740.10     3.90.850.10    

ProteinModelPortal

H9JX79   H9JXC5   A0A194QLC3   A0A2H1VC49   G9F9G6   H9JXC7   + More
A0A194QH27   A0A2A4J905   A0A2W1BMB0   A0A0N1PFL9   A0A2A4IWH6   A0A2W1BC39   H9JXC6   A0A0N1IBS6   A0A194QFH9   A0A3G1T1E9   A0A2A4IZ96   H9JXC2   A0A3S2N597   A0A2W1BEU6   A0A2H1W6N8   A0A2H1WLJ0   A0A194QFC2   A0A2W1BJB1   H9JXC4   A0A2H1WZM4   A0A2H1WLB6   A0A2H1VX30   V5GUF1   V5GII4   V5GSR2   A0A212FBG8   A0A212FIL5   A0A0K8TUU4   D0VYR9   A0A3S2NZ50   D0VYS0   A0A194R3H6   A0A194PPG4   A0A0B5EM11   H9JX80   D0VYR8   H9JX83   A0A194R3H3   D0VYS1   D0VYR6   A0A194PMG8   G9F9G9   A0A0B5EKM7   A0A194QDS5   D0VYR5   A0A059U9B2   D2X5V7   S5SP57   A0A194R3Z4   A0A194R8P7   B0WNN7   A0A1Q3FR87   X2CIK2   A0A059UAE7   D6WPV3   A0A3S2PE71   G9F9I3   A0A212FF90   A0A060NZS1   A0A212FF93   V5I949   A0A1W4WG49   A0A0S7EMZ9   N6TKX9   J3JV61   V5I873   A0A2A4JPN8   A0A0N1I6T9   A0A1L8DQN1   D9ILU1   A0A1L8DQS5   A0A194PU18   A0A1L8DR18   A0A2A4JEG9   A0A2M4BKN2   A0A2H1V873   A0A212EXF2   A0A2H1VVL0   A0A194PMT8   A0A1S4FLR9   A0A2M3ZET6   A0A059U5M3   S4NTM4   A0A2A4JPS5   A0A1B0CB38   V5GH04   A0A1W4WMX7   A0A2W1BD53   W5JN46   A0A165G9G6   A0A1B0DHF5  

PDB

5CG0     E-value=9.10046e-27,     Score=295

KEGG

101740965    no KO assigned | (RefSeq) myrosinase 1-like

GO

GO:0004553   GO:0005975   GO:0016021   GO:0002161   GO:0006428   GO:0004822   GO:0005524   GO:0102483   GO:0008422   GO:0008152   GO:0016798   GO:0005737   GO:0004812   GO:0000049  

PANTHER

PTHR10353  

Length:

189

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0968599999999999

Exp number, first 60 AAs:

0.0825799999999999

Total prob of N-in:

0.05605

outside

1  -  189

 

 

Pi

187.639729

Theta

153.528211

Tajima's D

1.710826

CLR

0.292275

CSRT

0.831508424578771

Interpretation

Uncertain