Gene

KWMTBOMO12223  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014148

Annotation

PREDICTED:_myrosinase_1-like_[Bombyx_mori]

Location

Bomo_Chr20(-):10010962-10022418      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 0.876

CDS

ATGTTAGTGGTAGCTTGTGTTCTATGTTTCAGTTCATTCCTTCGTCCGCTCTTGGCGAATAAGGAATTGCATTTCCCGAGATGGTTCAAGTTCGGGGCGGCCACGTCGTCGTACCAGATCGAAGGGTCCTGGAATGTTAGTGACAAAACACCAAGTACTTGGGACGATTACACGCATACACAGCCCCATAGGATCAAGGATCACTCCAATGGAGATGTTGCTTGTGACTCTTACAACCAGTACGAGAAGGACATTGAGATGGCCGAGCAGTTGGGACTTGATTTTTACAGGTTTTCTATATCCTGGCCAAGACTGTTGCCTAAAGGATTCCGCACTCGCATCAGTGCGGACGGACGGCAATACTACGACAATTTGATAAACGGACTGCTAGACCGAGGGATTGAACCTATGGTCACTTTGTACCATTCAGATATGCCGAAGATATTTCAAGATTTGGGAGGTTGGGCCAATCCTGAAATGGCAGAATGGTTTGCCGATTACGCGGACGTAGCTTTCTCTCTGTACGGAGACAGAGTGAAACTTTGGATCACGATCAATGAGCCTTTACATGCTTGTGATAGCAGCTCACGCGTTCTTGGGGTCGTCGAGCCATTCCTGGCTCCATATTTGTGCACGAAGACTCTGCTCATGGCTCACGCCAAAGCTTACCATAATTATAAAAAGAACTATAAGCCGATGTACCAAGGGAAGGTCGGTATTGCCCACACCGCATTTTATTTCGGTGCAAAAACTCAAGACGATTCGGAACTCACAGAACTATTCCGGCAATATAATTTTGGTCGTTTTATGCACCCAATACATTCCAAGTCTGGAGGGTGGCCTGCTATCGTTGTAGAACTTTTGAAGAATATCAGTTCAAAAGAAGGATTCCCGCGCTCTAGATTACCTCCGTTAAGCAAACATGAAGTTGAATTCATCAGAGGTACTAATGATTTCTTTGGATTGAATTACTACACCAGTCGCACGGTGAGAAGAGCTAAAGCTGGCGAGAAAAGGCCGGAATACCTTGGCAATCTGCCAGAGTTCAACGCGATTTTCGAAAGTTACCCTAACAGCACAGCGACATATCCTGAAGAATACAGTTCATACCCTGAAGGCCTGAGGGCGTTCATAGCTTGGGTCACGAAAAACTACGGAGTCCAAGACATTCTCATCACAGAAAACGGTTACACCAGTTACAAAGATGACCTGAATGATTTCGACAGAATCACCTACATCGAGAAGCACTTAGAGAAGATTCTACTTTGCATTTACGAAGACGGAGCTAGAATACACGGTTACACATACTGGTCACTGATGGACAACTTCGAATGGAAGCACGGGTATACAGCAAAGTTTGGTCTTTACAACGTCGACTTCTCTGACGTGGACCGGAAGCGCACTCCAAGACTCTCAGCCCAGTACTACTCATACGTTATCAAGAGCAGACAGATCGATTCTAACAAGTGGAAGTCACAGATGGAAGATACCAACGACAACAAAAAACCTATTGCCGATGTCGCTTAA

Protein

MLVVACVLCFSSFLRPLLANKELHFPRWFKFGAATSSYQIEGSWNVSDKTPSTWDDYTHTQPHRIKDHSNGDVACDSYNQYEKDIEMAEQLGLDFYRFSISWPRLLPKGFRTRISADGRQYYDNLINGLLDRGIEPMVTLYHSDMPKIFQDLGGWANPEMAEWFADYADVAFSLYGDRVKLWITINEPLHACDSSSRVLGVVEPFLAPYLCTKTLLMAHAKAYHNYKKNYKPMYQGKVGIAHTAFYFGAKTQDDSELTELFRQYNFGRFMHPIHSKSGGWPAIVVELLKNISSKEGFPRSRLPPLSKHEVEFIRGTNDFFGLNYYTSRTVRRAKAGEKRPEYLGNLPEFNAIFESYPNSTATYPEEYSSYPEGLRAFIAWVTKNYGVQDILITENGYTSYKDDLNDFDRITYIEKHLEKILLCIYEDGARIHGYTYWSLMDNFEWKHGYTAKFGLYNVDFSDVDRKRTPRLSAQYYSYVIKSRQIDSNKWKSQMEDTNDNKKPIADVA

Similarity

Belongs to the glycosyl hydrolase 1 family.
Belongs to the class-I aminoacyl-tRNA synthetase family.

Uniprot

H9JX83   H9JX80   H9JXC4   A0A3S2N597   A0A2A4J905   A0A194QH27   + More
A0A2W1BMB0   A0A2A4IWH6   A0A2W1BC39   H9JX79   A0A3G1T1E9   A0A194QFC2   A0A2A4IZ96   A0A2W1BEU6   A0A2H1VC49   A0A194QFH9   H9JXC5   A0A2W1BJB1   A0A2H1W6N8   A0A2H1WLJ0   A0A034VAL4   A0A034VEY7   H9JXC6   A0A0K8UIW8   A0A0K8W4X1   A0A2H1WLB6   A0A0K8W3Q7   D6X3T6   Q5TQY8   A0A1A9W4X6   A0A1Y9GKT0   A0A182JGM2   A0A0A1XAG3   A0A1A9XR01   A0A1Y9IW73   A0A1W4XQQ3   A0A194PMT2   A0A1B0C2P0   A0A182U0B4   A0A1Y9IRY8   W8BL15   A0A1Y9IS68   A0A182LL18   A0A182YP84   A0A0A1XS57   J3JV61   N6TKX9   A0A1Y9J0B2   A0A1Y9GL87   A0A1A9ZLX0   B2DBM6   Q7Q5I1   A0A212FF93   A0A194RQF8   A0A1A9UP13   A0A194R360   A0A194PJU3   A0A1Y9GLV6   A0A194R3H6   A0A1Y9J0J6   A0A2H1VX30   A0A194R8P7   D5KQK3   Q7PI98   A0A212FF90   B0WNN7   G9F9G9   A0A2H1VF65   A0A194PPG4   W5JK33   A0A1Y9IS75   A0A182TWE4   A0A1Y9IVG9   G9F9I3   A0A1W4UV58   Q16WF2   B4KXZ5   A0A2H1V873   A0A194R3H3   A0A1S4G3W5   A0A1S5SJI5   A0A212EXF5   G9F9I0   A0A2A4JPS5   Q16ET6   A0A3S2PE71   A0A1Y1MAN2   A0A212F963   H9IZH5   A0A182QI13   A0A182YP82   B4H7D1   A0A194QYR8   Q29DT6   A0A2A4IZK8   A0A182LL23   A0A182LWK9   A0A336M4Z6   A0A194PNC9  

Pubmed

19121390    26354079    28756777    25348373    18362917    19820115    + More
12364791    14747013    17210077    25830018    24495485    20966253    25244985    22516182    23537049    18712529    22118469    20920257    23761445    17510324    17994087    28004739    15632085   

EMBL

BABH01035811    BABH01035812    BABH01035816    BABH01035817    BABH01035821    RSAL01000405    + More
RVE41892.1    NWSH01002416    PCG68339.1    KQ459053    KPJ04240.1    KZ150152    PZC72823.1    NWSH01005512    PCG64155.1    PZC72822.1    BABH01035825    MG992371    AXY94809.1    KPJ04243.1    NWSH01004417    PCG65145.1    PZC72831.1    ODYU01001752    SOQ38385.1    KPJ04242.1    BABH01035826    BABH01035827    PZC72820.1    ODYU01006661    SOQ48703.1    ODYU01009444    SOQ53877.1    GAKP01018616    JAC40336.1    GAKP01018617    JAC40335.1    BABH01035833    BABH01035834    BABH01035835    GDHF01025685    JAI26629.1    GDHF01006374    JAI45940.1    SOQ53875.1    GDHF01006779    JAI45535.1    KQ971326    EEZ97373.2    AAAB01008960    EAL40075.2    APCN01002262    GBXI01006185    JAD08107.1    KQ459598    KPI94627.1    JXJN01024604    JXJN01024605    JXJN01024606    GAMC01007113    JAB99442.1    GBXI01000924    JAD13368.1    BT127127    AEE62089.1    APGK01033064    APGK01033065    APGK01033066    KB740860    ENN78593.1    AB264710    BAG30785.1    EAA11668.3    AGBW02008847    OWR52397.1    KQ459875    KPJ19634.1    KQ460779    KPJ12243.1    KQ459601    KPI93701.1    KPJ12247.1    ODYU01004975    SOQ45390.1    KPJ12246.1    GU591172    ADD92156.1    EAA44227.3    OWR52398.1    DS232013    EDS31873.1    JN033714    AEW46867.1    ODYU01001971    SOQ38904.1    KPI94624.1    ADMH02000892    ETN64737.1    JN033728    AEW46881.1    CH477568    EAT38910.1    CH933809    EDW18697.1    ODYU01001184    SOQ37050.1    KPJ12242.1    KU170546    APM84101.1    AGBW02011758    OWR46180.1    JN033725    AEW46878.1    NWSH01000819    PCG74065.1    CH478582    EAT32750.1    RSAL01000077    RVE48784.1    GEZM01037494    JAV82048.1    AGBW02009638    OWR50268.1    BABH01014157    AXCN02000455    CH479217    EDW33737.1    KQ461150    KPJ08731.1    CH379070    EAL30328.1    NWSH01004297    PCG65255.1    AXCM01009805    UFQT01000563    SSX25344.1    KQ459597    KPI94941.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000007266    UP000007062    + More
UP000091820    UP000075840    UP000075880    UP000092443    UP000075920    UP000192223    UP000092460    UP000075902    UP000075903    UP000075882    UP000076408    UP000019118    UP000076407    UP000092445    UP000007151    UP000053240    UP000078200    UP000002320    UP000000673    UP000192221    UP000008820    UP000009192    UP000075886    UP000008744    UP000001819    UP000075883   

PRIDE

H9JX83    H9JX80    H9JXC4    H9JX79    H9JXC5    H9JXC6    + More
H9IZH5   

Pfam

PF00232   Glyco_hydro_1        + More
PF00501   AMP-binding
PF13193   AMP-binding_C
PF00133   tRNA-synt_1

Interpro

IPR001360   Glyco_hydro_1        + More
IPR017853   Glycoside_hydrolase_SF       
IPR033132   Glyco_hydro_1_N_CS       
IPR018120   Glyco_hydro_1_AS       
IPR000873   AMP-dep_Synth/Lig       
IPR025110   AMP-bd_C       
IPR002300   aa-tRNA-synth_Ia       
IPR014729   Rossmann-like_a/b/a_fold       
IPR001412   aa-tRNA-synth_I_CS       
IPR009008   Val/Leu/Ile-tRNA-synth_edit       
IPR002301   Ile-tRNA-ligase       

SUPFAM

SSF51445   SSF51445        + More
SSF50677   SSF50677       

Gene 3D

3.40.50.620     3.90.740.10    

ProteinModelPortal

H9JX83   H9JX80   H9JXC4   A0A3S2N597   A0A2A4J905   A0A194QH27   + More
A0A2W1BMB0   A0A2A4IWH6   A0A2W1BC39   H9JX79   A0A3G1T1E9   A0A194QFC2   A0A2A4IZ96   A0A2W1BEU6   A0A2H1VC49   A0A194QFH9   H9JXC5   A0A2W1BJB1   A0A2H1W6N8   A0A2H1WLJ0   A0A034VAL4   A0A034VEY7   H9JXC6   A0A0K8UIW8   A0A0K8W4X1   A0A2H1WLB6   A0A0K8W3Q7   D6X3T6   Q5TQY8   A0A1A9W4X6   A0A1Y9GKT0   A0A182JGM2   A0A0A1XAG3   A0A1A9XR01   A0A1Y9IW73   A0A1W4XQQ3   A0A194PMT2   A0A1B0C2P0   A0A182U0B4   A0A1Y9IRY8   W8BL15   A0A1Y9IS68   A0A182LL18   A0A182YP84   A0A0A1XS57   J3JV61   N6TKX9   A0A1Y9J0B2   A0A1Y9GL87   A0A1A9ZLX0   B2DBM6   Q7Q5I1   A0A212FF93   A0A194RQF8   A0A1A9UP13   A0A194R360   A0A194PJU3   A0A1Y9GLV6   A0A194R3H6   A0A1Y9J0J6   A0A2H1VX30   A0A194R8P7   D5KQK3   Q7PI98   A0A212FF90   B0WNN7   G9F9G9   A0A2H1VF65   A0A194PPG4   W5JK33   A0A1Y9IS75   A0A182TWE4   A0A1Y9IVG9   G9F9I3   A0A1W4UV58   Q16WF2   B4KXZ5   A0A2H1V873   A0A194R3H3   A0A1S4G3W5   A0A1S5SJI5   A0A212EXF5   G9F9I0   A0A2A4JPS5   Q16ET6   A0A3S2PE71   A0A1Y1MAN2   A0A212F963   H9IZH5   A0A182QI13   A0A182YP82   B4H7D1   A0A194QYR8   Q29DT6   A0A2A4IZK8   A0A182LL23   A0A182LWK9   A0A336M4Z6   A0A194PNC9  

PDB

3VII     E-value=1.95568e-97,     Score=909

KEGG

101737105    no KO assigned | (RefSeq) myrosinase 1-like

GO

GO:0005975   GO:0004553   GO:0016021   GO:0008422   GO:0002161   GO:0006428   GO:0004822   GO:0005524   GO:0102483   GO:0008152   GO:0016798   GO:0005737   GO:0004812   GO:0000049  

PANTHER

PTHR10353  

SignalP

Position:   1 - 19,         Likelihood:  0.681139

 

 

Length:

508

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.612209999999999

Exp number, first 60 AAs:

0.60751

Total prob of N-in:

0.03434

outside

1  -  508

 

 

Pi

27.313766

Theta

27.457613

Tajima's D

0.033778

CLR

0.660823

CSRT

0.378331083445828

Interpretation

Uncertain