Gene

KWMTBOMO12221

Annotation

PREDICTED:_uncharacterized_protein_LOC105388069_isoform_X2_[Plutella_xylostella]

Location

Bomo_Chr20(+):9912309-9913312      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.132 Nuclear   Reliability : 1.197

CDS

ATGTCCATATCTAATAGTTGTCATTTGACTATAAAATCACGTGTTAATAATTTTAGTGCACCCCTTAAATGCTTAGTTGTTCCGAAAATAACTGGCTTGTTGCCGAATACATCAGTACATGTAACGAACCTTAACTTGCCCCAGCATATCCAATTAGCGGATCCTAAGTTCTTCCGCCCATCAGATGTTGACTTATTATTAGGTGCCGAAATATTCTTCGAGTTAATGTTACCTAATCAAATAAAATTAGGATCTGCAAAACCGGTTCTTCAGGAATCTAAATTAGGCTGGATTGTAGCAGGTCCTCTTTACAGTAGTGAGCTGAACGAGAATAGACAGGTGCACTGTAACTTCACTAAAGATATCAGTGATCAGCTGACAAGGTTTTGGAGTCTTGAAGAAGTTCCATCCTCAAAACCTACCATGTCTGCTGACGACGAATTTTGTGAACGCTACTTTACTGCAACCACCAAGCGTCTTGAAGATGGTAGATTTTCAGTATTTATTCCATTCAAAGAATCCCCTGAAGTAGCACTAGGTGATTCGTTCTTTATTGCAAAAAAGCGTTTCTTGAGCCTTGAGAGAAAACTTAATAAAGACCTTAATTTAAAGAAGGAGTATTGTGCCTTTATTAATGAATATGAACAGTTGGGTCACTTAAATGAAATAAGCAAACCTCAATTTGGTTACTTTAAGACTTAA

Protein

MSISNSCHLTIKSRVNNFSAPLKCLVVPKITGLLPNTSVHVTNLNLPQHIQLADPKFFRPSDVDLLLGAEIFFELMLPNQIKLGSAKPVLQESKLGWIVAGPLYSSELNENRQVHCNFTKDISDQLTRFWSLEEVPSSKPTMSADDEFCERYFTATTKRLEDGRFSVFIPFKESPEVALGDSFFIAKKRFLSLERKLNKDLNLKKEYCAFINEYEQLGHLNEISKPQFGYFKT

Uniprot

A0A2A4JL65   A0A194RAG7   A0A194RGQ8   V5H006   A0A0N1IBH6   A0A151JF45   + More
A0A1Y1KFT0   A0A3S2N7W6   V5I9U3   A0A151JAD6   S4NIJ2   A0A151II47   A0A2A4JBY8   A0A2H1WXG3   A0A194RI04   V5GXV6   V5GU69   A0A151I6H7   A0A2S2PBM2   A0A3S2N9P3   A0A151JQG2   A0A2A4JM97   A0A151IQ50   A0A151ITI6   A0A0N0PBK0   A0A151II30   A0A151IG97   A0A151IIA5   A0A2H1X027   A0A2S2PTX9   A0A1I8PRY2   A0A0E4G8R0   A0A194QJ48   A0A336MSH8   A0A151IV38   A0A0N1IPF2   A0A0P6K153   A0A0P6J6G2   A0A2H1WM60   A0A1W7R6S6   U4U302   A0A151WVL4   A0A151I679   A0A1Y1LAD7   A0A1W7R6A8   A0A1Y1L369   J9LVB4   X1WL82   A0A151IIX4   D6WBH9   A0A151K2N4   J9LHB7   A0A1W7R6J0   A0A151IGP3   A0A2H1WRL5   V5I8D5   A0A0K8UKF5   A0A139W8E1   A0A1W7R6I7   A0A1W7R6B7   A0A1W7R6J2   X1WVV7   A0A2S2PCB8   A0A1W7R6L7   A0A0L7QJW3   A0A2H1VWV5   A0A182YS31   A0A224XG39   A0A2S2NLW5   A0A151XF09   A0A151JSL5   A0A1Y1N3M1   A0A1W7R6N3   A0A0J7KD64   A0A2S2P9U8   D7GY44   V5I888   A0A182H647   A0A023F0J1   J9LYM7   A0A0J7MWT6   W8ANH7   A0A0K8W9F7   A0A151IN79   A0A026VRK8   A0A2S2P2N5   A0A3L8E181   A0A182XPL5   A0A151X6L0   E9J9Y8   A0A151JNU0   A0A2S2PKV3   A0A2M4BF63   J9K774   U4US96   A0A2S2PWK4   A0A3L8DPK0   A0A2S2Q0A5   A0A151XF58   X1XU20  

Pubmed

26354079    28004739    23622113    26999592    23537049    18362917    + More
19820115    25244985    26483478    25474469    24495485    24508170    30249741    21282665   

EMBL

NWSH01001201    PCG72150.1    KQ460500    KPJ14270.1    KQ460211    KPJ16510.1    + More
GALX01002328    JAB66138.1    KQ459312    KPJ01687.1    KQ979018    KYN24375.1    GEZM01086715    JAV59020.1    RSAL01000231    RVE43851.1    GALX01002335    JAB66131.1    KQ979286    KYN22018.1    GAIX01014054    JAA78506.1    KQ977521    KYN02138.1    NWSH01001945    PCG69607.1    ODYU01011804    SOQ57759.1    KQ460205    KPJ16960.1    GALX01003263    JAB65203.1    GALX01003264    JAB65202.1    KQ978502    KYM93417.1    GGMR01014230    MBY26849.1    RSAL01000402    RVE41913.1    KQ978646    KYN29432.1    NWSH01001014    PCG73111.1    KQ976790    KYN08275.1    KQ981002    KYN10407.1    KQ460970    KPJ10166.1    KQ977526    KYN02131.1    KQ977737    KYN00241.1    KQ977557    KYN02007.1    ODYU01012312    SOQ58566.1    GGMR01020322    MBY32941.1    HACL01000129    CFW94423.1    KQ458793    KPJ04955.1    UFQS01001097    UFQT01001097    SSX08987.1    SSX28898.1    KQ980919    KYN11439.1    KQ460545    KPJ14069.1    GDUN01000087    JAN95832.1    GDUN01000088    JAN95831.1    ODYU01009575    SOQ54097.1    GEHC01000870    JAV46775.1    KB631950    ERL87422.1    KQ982705    KYQ51878.1    KYM93421.1    GEZM01066274    JAV68017.1    GEHC01000946    JAV46699.1    GEZM01066272    JAV68024.1    ABLF02004142    ABLF02061721    KQ977454    KYN02594.1    KQ971308    EEZ99156.1    LKEX01024252    KYN50342.1    ABLF02022040    ABLF02056888    GEHC01000877    JAV46768.1    KQ977691    KYN00577.1    ODYU01010476    SOQ55616.1    GALX01004875    JAB63591.1    GDHF01025509    GDHF01017777    JAI26805.1    JAI34537.1    KQ973442    KXZ75531.1    GEHC01000869    JAV46776.1    GEHC01000939    JAV46706.1    GEHC01000894    JAV46751.1    ABLF02041505    GGMR01014413    MBY27032.1    GEHC01000864    JAV46781.1    KQ415050    KOC58845.1    ODYU01004932    SOQ45315.1    GFTR01008874    JAW07552.1    GGMR01005535    MBY18154.1    KQ982237    KYQ58858.1    KQ978539    KYN30235.1    GEZM01018629    GEZM01018623    JAV90127.1    GEHC01000865    JAV46780.1    LBMM01009461    KMQ88124.1    GGMR01013586    MBY26205.1    GG694980    EFA13691.1    GALX01005110    JAB63356.1    JXUM01113346    KQ565681    KXJ70776.1    GBBI01004211    JAC14501.1    ABLF02016109    ABLF02016113    LBMM01015133    KMQ84915.1    GAMC01020552    JAB86003.1    GDHF01004543    JAI47771.1    KQ976954    KYN06860.1    KK111555    EZA46362.1    GGMR01011015    MBY23634.1    QOIP01000002    RLU25949.1    KQ982480    KYQ56021.1    GL769615    EFZ10365.1    KQ978790    KYN28351.1    GGMR01017408    MBY30027.1    GGFJ01002516    MBW51657.1    ABLF02023723    KI209140    ERL95987.1    GGMS01000724    MBY69927.1    QOIP01000005    RLU22365.1    GGMS01001896    MBY71099.1    KQ982204    KYQ59009.1    ABLF02014076   

Proteomes

UP000218220    UP000053240    UP000053268    UP000078492    UP000283053    UP000078542    + More
UP000095300    UP000030742    UP000075809    UP000007819    UP000007266    UP000053825    UP000076408    UP000036403    UP000069940    UP000249989    UP000053097    UP000279307    UP000076407   

Pfam

PF05380   Peptidase_A17        + More
PF03564   DUF1759
PF05585   DUF1758
PF00665   rve
PF18701   DUF5641
PF17921   Integrase_H2C2
PF00078   RVT_1
PF12017   Tnp_P_element

Interpro

IPR008042   Retrotrans_Pao        + More
IPR005312   DUF1759       
IPR008737   Peptidase_asp_put       
IPR021109   Peptidase_aspartic_dom_sf       
IPR001584   Integrase_cat-core       
IPR012337   RNaseH-like_sf       
IPR040676   DUF5641       
IPR036397   RNaseH_sf       
IPR041588   Integrase_H2C2       
IPR001878   Znf_CCHC       
IPR001969   Aspartic_peptidase_AS       
IPR001995   Peptidase_A2_cat       
IPR036875   Znf_CCHC_sf       
IPR000477   RT_dom       
IPR021896   Transposase_37       

SUPFAM

SSF50630   SSF50630        + More
SSF53098   SSF53098       
SSF57756   SSF57756       

Gene 3D

3.30.420.10     2.40.70.10    

ProteinModelPortal

A0A2A4JL65   A0A194RAG7   A0A194RGQ8   V5H006   A0A0N1IBH6   A0A151JF45   + More
A0A1Y1KFT0   A0A3S2N7W6   V5I9U3   A0A151JAD6   S4NIJ2   A0A151II47   A0A2A4JBY8   A0A2H1WXG3   A0A194RI04   V5GXV6   V5GU69   A0A151I6H7   A0A2S2PBM2   A0A3S2N9P3   A0A151JQG2   A0A2A4JM97   A0A151IQ50   A0A151ITI6   A0A0N0PBK0   A0A151II30   A0A151IG97   A0A151IIA5   A0A2H1X027   A0A2S2PTX9   A0A1I8PRY2   A0A0E4G8R0   A0A194QJ48   A0A336MSH8   A0A151IV38   A0A0N1IPF2   A0A0P6K153   A0A0P6J6G2   A0A2H1WM60   A0A1W7R6S6   U4U302   A0A151WVL4   A0A151I679   A0A1Y1LAD7   A0A1W7R6A8   A0A1Y1L369   J9LVB4   X1WL82   A0A151IIX4   D6WBH9   A0A151K2N4   J9LHB7   A0A1W7R6J0   A0A151IGP3   A0A2H1WRL5   V5I8D5   A0A0K8UKF5   A0A139W8E1   A0A1W7R6I7   A0A1W7R6B7   A0A1W7R6J2   X1WVV7   A0A2S2PCB8   A0A1W7R6L7   A0A0L7QJW3   A0A2H1VWV5   A0A182YS31   A0A224XG39   A0A2S2NLW5   A0A151XF09   A0A151JSL5   A0A1Y1N3M1   A0A1W7R6N3   A0A0J7KD64   A0A2S2P9U8   D7GY44   V5I888   A0A182H647   A0A023F0J1   J9LYM7   A0A0J7MWT6   W8ANH7   A0A0K8W9F7   A0A151IN79   A0A026VRK8   A0A2S2P2N5   A0A3L8E181   A0A182XPL5   A0A151X6L0   E9J9Y8   A0A151JNU0   A0A2S2PKV3   A0A2M4BF63   J9K774   U4US96   A0A2S2PWK4   A0A3L8DPK0   A0A2S2Q0A5   A0A151XF58   X1XU20  

KEGG

NA   

GO

GO:0003676   GO:0015074   GO:0008270   GO:0004190   GO:0016021   GO:0006313   GO:0004803  

Length:

233

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0203

Exp number, first 60 AAs:

0.01853

Total prob of N-in:

0.07160

outside

1  -  233

 

 

Pi

427.205227

Theta

219.544111

Tajima's D

2.978339

CLR

0

CSRT

0.979751012449378

Interpretation

Uncertain