Gene

KWMTBOMO12212  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014185

Annotation

hypothetical_protein_KGM_08400_[Danaus_plexippus]

Location

Bomo_Chr20(+):9485790-9487533      View in EpiBrowser

Full name

Dynein light chain roadblock      

Location in the cell

Cytoplasmic   Reliability : 1.109

CDS

ATGGCCACCGAGGTCGAAGAAACGATCAAGAGGATCCAAGCCCACAAAGGGGTGATGGGTGTCGTCATCGTAAACCACGAAGGTATACCAATCAAAAGCTCATTAGATAATGCCACTTCAGTGTTATATGCTGGGCTTATTGGACAGCTTACTGAGAAGGCCAGGAATGTGGTTCGTGAAATGGACTCCACAAATGAGTTGACATTCCTTCGAGTCAGAAGTCGAAGACATGAGATACTCATTGCACCGGACAGAGAATTCATATTAATTGTTATACAGAACACATCGGATTAA

Protein

MATEVEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKARNVVREMDSTNELTFLRVRSRRHEILIAPDREFILIVIQNTSD

Similarity

Belongs to the GAMAD family.

Uniprot

S4PV47   H9JXC0   I4DLI9   A0A212FKB7   A0A2A4JKF4   A0A2H1V8R9   + More
F2YHL5   A0A0N0PB74   A0A194QFP0   A0A2W1BHS8   A0A067RH23   A0A158NYD5   A0A0J7KY16   A0A026WJ25   A0A2A3EMM9   A0A088ADJ6   A0A195AYE1   A0A1I8PM73   A0A1L8EGK4   A0A0K8TPR0   A0A154PC50   A0A1I8MN78   E2BRK4   T1D5K7   A0A1Q3FIA4   B0W4E5   Q17AA0   A0A023ECK0   A0A151WJ12   A0A151JRJ4   K7JA95   A0A151IN50   A0A1B0GJT0   A0A1W4VCE7   B4LPW2   B4KQZ2   A0A3B0J522   Q291G9   B4GAR3   B4P7Z5   A0A0M5IXC9   B3MG72   B4NNF3   B4J925   B3NNR1   B4QAU0   B4HMM0   Q7KMS3   U5EKI8   D3TRW5   A0A1W4X676   A0A1B6KJ82   A0A0P5JZH7   E9HDV5   J3JTY4   A0A1B6F9X3   T1DQJ3   A0A2M3ZIQ8   A0A2M4AQW6   A0A182MI57   A0A182PCW5   A0A182V2N0   W5JFP9   A0A182K785   A0A182VYA3   A0A182XKC0   Q5TSL8   A0A182HJM2   A0A1L8DX00   A0A3B0JPV3   A0A1J1I279   A0A182QHH1   D6WQQ5   A0A2S2PVG4   A0A182NSS8   A0A182XWL5   A0A182RFX8   A0A2S2PD67   A0A2H8TPR3   C4WVV2   A0A182UHF6   A0A1S3D5W7   A0A023FAQ0   A0A0L0CJA6   H2XQ56   A0A224Y1Q6   A0A0V0G8H2   A0A069DNV8   A0A0P6HH68   Q8T899   A0A0P4VTR1   R4FMK9   A0A182F7W7   A0A3P9AMS4   A0A3M7Q1Y4   A0A087UDX2   A0A2P2HVW6   A0A0N0U3B6   W5LWX8   A0A0L7RGT0  

Pubmed

23622113    19121390    22651552    22118469    26354079    28756777    + More
24845553    21347285    24508170    30249741    26369729    25315136    20798317    24330624    17510324    24945155    20075255    17994087    15632085    17550304    22936249    10402468    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20353571    21292972    22516182    23537049    20920257    23761445    12364791    14747013    17210077    18362917    19820115    25244985    25474469    26108605    12481130    15114417    26334808    12203911    16141696    27129103    25069045    30375419   

EMBL

GAIX01009168    JAA83392.1    BABH01035746    AK402157    BAM18779.1    AGBW02008076    + More
OWR54187.1    NWSH01001276    PCG71882.1    ODYU01001265    SOQ37243.1    JF261176    ADZ96259.1    KQ461113    KPJ08919.1    KQ459053    KPJ04229.1    KZ150038    PZC74602.1    KK852686    KDR18463.1    ADTU01003759    LBMM01001988    KMQ95442.1    KK107178    QOIP01000006    EZA56047.1    RLU21236.1    KZ288206    PBC33063.1    KQ976701    KYM77216.1    GFDG01000949    JAV17850.1    GDAI01001485    JAI16118.1    KQ434864    KZC09004.1    GL449965    EFN81696.1    GALA01000463    JAA94389.1    GFDL01007812    JAV27233.1    DS231836    EDS33230.1    CH477337    EAT43191.1    GAPW01006516    GAPW01006515    GEHC01000027    JAC07082.1    JAV47618.1    KQ983055    KYQ47814.1    KQ978607    KYN29914.1    AAZX01013217    AAZX01014215    KQ976963    KYN06777.1    AJWK01022211    CH940648    EDW61302.1    CH933808    EDW10348.2    OUUW01000001    SPP74682.1    CM000071    EAL25143.1    CH479181    EDW32015.1    CM000158    EDW92150.1    CP012524    ALC41081.1    CH902619    EDV36767.1    CH964282    EDW85892.1    CH916367    EDW01374.1    CH954179    EDV55618.2    CM000362    CM002911    EDX07491.1    KMY94544.1    CH480816    CH481394    EDW48288.1    EDW54727.1    AF141920    AF141921    AE013599    AY071587    KX532053    AAD45987.1    AAF57861.1    AAL49209.1    ANY27863.1    GANO01001797    JAB58074.1    EZ424167    ADD20443.1    GEBQ01028481    JAT11496.1    GDIQ01191932    LRGB01003275    JAK59793.1    KZS03422.1    GL732625    EFX70108.1    APGK01054226    BT126694    KB741248    KB632305    AEE61656.1    ENN71942.1    ERL91859.1    GECZ01022743    JAS47026.1    GAMD01002449    JAA99141.1    GGFM01007638    MBW28389.1    GGFK01009842    MBW43163.1    AXCM01006045    ADMH02001529    GGFL01004252    ETN62168.1    MBW68430.1    AAAB01008904    EAA09669.4    APCN01002188    GFDF01003101    JAV10983.1    SPP74681.1    CVRI01000036    CRK92950.1    AXCN02000300    KQ971354    EFA07590.1    GGMS01000325    MBY69528.1    GGMR01014784    MBY27403.1    GFXV01000619    GFXV01003827    MBW12424.1    MBW15632.1    ABLF02022556    AK341692    BAH72022.1    GBBI01000729    GEMB01001187    JAC17983.1    JAS01961.1    JRES01000319    KNC32335.1    EAAA01002910    GFTR01001474    JAW14952.1    GECL01001689    JAP04435.1    GBGD01003612    JAC85277.1    GDIQ01019899    JAN74838.1    AB074929    BAB85843.1    GDKW01000570    JAI56025.1    ACPB03005914    GAHY01000948    JAA76562.1    REGN01007898    RNA04991.1    KK119384    KFM75561.1    IACF01000123    LAB65931.1    KQ435944    KOX68201.1    AHAT01010686    KQ414596    KOC70038.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053240    UP000053268    UP000027135    + More
UP000005205    UP000036403    UP000053097    UP000279307    UP000242457    UP000005203    UP000078540    UP000095300    UP000076502    UP000095301    UP000008237    UP000002320    UP000008820    UP000075809    UP000078492    UP000002358    UP000078542    UP000092461    UP000192221    UP000008792    UP000009192    UP000268350    UP000001819    UP000008744    UP000002282    UP000092553    UP000007801    UP000007798    UP000001070    UP000008711    UP000000304    UP000001292    UP000000803    UP000192223    UP000076858    UP000000305    UP000019118    UP000030742    UP000075883    UP000075885    UP000075903    UP000000673    UP000075881    UP000075920    UP000076407    UP000007062    UP000075840    UP000183832    UP000075886    UP000007266    UP000075884    UP000076408    UP000075900    UP000007819    UP000075902    UP000079169    UP000037069    UP000008144    UP000015103    UP000069272    UP000265140    UP000276133    UP000054359    UP000053105    UP000018468    UP000053825   

PRIDE

H9JXC0    F2YHL5    Q7KMS3   

Pfam

PF03259   Robl_LC7

Interpro

IPR016561   DYNLRB1/2        + More
IPR004942   Roadblock/LAMTOR2_dom       

ProteinModelPortal

S4PV47   H9JXC0   I4DLI9   A0A212FKB7   A0A2A4JKF4   A0A2H1V8R9   + More
F2YHL5   A0A0N0PB74   A0A194QFP0   A0A2W1BHS8   A0A067RH23   A0A158NYD5   A0A0J7KY16   A0A026WJ25   A0A2A3EMM9   A0A088ADJ6   A0A195AYE1   A0A1I8PM73   A0A1L8EGK4   A0A0K8TPR0   A0A154PC50   A0A1I8MN78   E2BRK4   T1D5K7   A0A1Q3FIA4   B0W4E5   Q17AA0   A0A023ECK0   A0A151WJ12   A0A151JRJ4   K7JA95   A0A151IN50   A0A1B0GJT0   A0A1W4VCE7   B4LPW2   B4KQZ2   A0A3B0J522   Q291G9   B4GAR3   B4P7Z5   A0A0M5IXC9   B3MG72   B4NNF3   B4J925   B3NNR1   B4QAU0   B4HMM0   Q7KMS3   U5EKI8   D3TRW5   A0A1W4X676   A0A1B6KJ82   A0A0P5JZH7   E9HDV5   J3JTY4   A0A1B6F9X3   T1DQJ3   A0A2M3ZIQ8   A0A2M4AQW6   A0A182MI57   A0A182PCW5   A0A182V2N0   W5JFP9   A0A182K785   A0A182VYA3   A0A182XKC0   Q5TSL8   A0A182HJM2   A0A1L8DX00   A0A3B0JPV3   A0A1J1I279   A0A182QHH1   D6WQQ5   A0A2S2PVG4   A0A182NSS8   A0A182XWL5   A0A182RFX8   A0A2S2PD67   A0A2H8TPR3   C4WVV2   A0A182UHF6   A0A1S3D5W7   A0A023FAQ0   A0A0L0CJA6   H2XQ56   A0A224Y1Q6   A0A0V0G8H2   A0A069DNV8   A0A0P6HH68   Q8T899   A0A0P4VTR1   R4FMK9   A0A182F7W7   A0A3P9AMS4   A0A3M7Q1Y4   A0A087UDX2   A0A2P2HVW6   A0A0N0U3B6   W5LWX8   A0A0L7RGT0  

PDB

3L9K     E-value=1.0045e-31,     Score=334

KEGG

100862762    K10419 dynein light chain roadblock-type | (RefSeq) dynein light chain roadblock-type 2

GO

GO:0045505   GO:0005874   GO:0003774   GO:0007018   GO:0005868   GO:0005737   GO:0005858   GO:0016319   GO:0048813   GO:0030286   GO:0042623   GO:0005875   GO:0005813   GO:0016021   GO:0003676   GO:0016788   GO:0007165   GO:0005525   GO:0008033   GO:0016787  

Subcellular location

  

Length:

97

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01797

Exp number, first 60 AAs:

0.01726

Total prob of N-in:

0.39710

outside

1  -  97

 

 

Pi

264.669128

Theta

206.833638

Tajima's D

0.924969

CLR

0

CSRT

0.640217989100545

Interpretation

Uncertain