SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12211
Pre Gene Modal
BGIBMGA014156
Annotation
PREDICTED:_SH3_domain-binding_protein_5-like_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 3.91
 

Sequence

CDS
ATGAACGAAGGCGCCGCGGAATGCTCCGAAGCTCTGGACCCTCGTGTACAGATTGAATTAGAACGCCTAAACACTGCAACTGATGAGATAAACCGTTTAGAAGTTGAATTGGACGAGGCTCGGCTCGCATTCCGTAGGTTGCTGGCTGAAGGTCATCTAAAGATACAGCAACTCACAAAAAAACTAGGAACCAGTGTGCACAAAGCTAGGCCTTATTATGAAGCTAGATTTAGAGCTAATATTACATCCCAGGAGCTGCAAAGCGCTACACTTGCTTATGATAAAGCAAACAGTGCCCATGCAGCTGCTAGGGAGATGGTGTACCTTGCCGAGCAGGGACTCGCAAGACTGGCGGAAGGTTCTGATGGGGGCCTTACTCTCGATCCAGCATGGCAGGAAATGCTTAACCACGCCACTCATCGAGTCAATCAGGCGGAAGCAGACCGAGCTCACGCGACGGTGACGCAGCGAACCAAGGCCGCGTCACACCGGGCGGCTACAACACTCGTGCAACAATTACAGAAATCCCTCAAAAGGCACATAGCCAAGTCCCGACCGTATTTCGAGGAGAAAGCTCGCATCAACACGGCTTTGGAAGCTCAGAAGGCGAAGATACAAATTCTGGAGGAGCAAGTGACGGAAGCAAAGCAGCAATACTCATCTGCACTGAGGAACTTGGAACGGATATCCGATGAAATACACAAACACCGGTCCAGAAGACAATCTGCTAGAAACGACACCGACCGGTCCACGGCGACAGACACGGCCAGCGACAGCAACACCGCGGCCAGCGACAAGCTGGAGGAGCTGTGCGAGAGCAGCTCGGAGGCCAACGTACGCGAGTGGCTGCGGCGCGCGGCCGAGGCGCCCCCGCCCCCCGACACCTGGACAGAGATAGAGCTCGACTGCTCCAGTCCCGAAGAGGTGGGCTTCGAGAAGTGCTCCCTGCGTCCCCGGTCGACTCCGGAGAAACTGTCGCCGCCCAGCCCCCAGGAGTCGAAGGTGTCCGCCTCCTCCCCGCGCCGCATCATCAGGTCGGACCGCGGCGCCTGCATACGAGCTGAATTGGAGAAGGGCCGGAGACAGAGCTTGGACGCCCTGCTGCATGATACGGGGGAGAAAGTCAAGGAGATGTTCCAAGGACTGTCCCTGTTCGGCGAGCGACGCGGCTCGGGCTCCGGCCGCAGCACCCCGCGCCCCGCGCACCGCACCTGCTCCCCGCGGGGATCCTCCTCCGCTTCAGACGACACCGACAGCCTCGCCAGCATTGAGATGTTAACCGATGATCAGATAGCGTCTCTAATGCTGGACGCGCAGCTCGAGGCGGTGTGCGAGCGCCTCGCCGGGGTCGGTCTGCCACCCAACCAGCGCTACTGA
Protein
MNEGAAECSEALDPRVQIELERLNTATDEINRLEVELDEARLAFRRLLAEGHLKIQQLTKKLGTSVHKARPYYEARFRANITSQELQSATLAYDKANSAHAAAREMVYLAEQGLARLAEGSDGGLTLDPAWQEMLNHATHRVNQAEADRAHATVTQRTKAASHRAATTLVQQLQKSLKRHIAKSRPYFEEKARINTALEAQKAKIQILEEQVTEAKQQYSSALRNLERISDEIHKHRSRRQSARNDTDRSTATDTASDSNTAASDKLEELCESSSEANVREWLRRAAEAPPPPDTWTEIELDCSSPEEVGFEKCSLRPRSTPEKLSPPSPQESKVSASSPRRIIRSDRGACIRAELEKGRRQSLDALLHDTGEKVKEMFQGLSLFGERRGSGSGRSTPRPAHRTCSPRGSSSASDDTDSLASIEMLTDDQIASLMLDAQLEAVCERLAGVGLPPNQRY

Summary

Pfam
PF05276   SH3BP5
Interpro
IPR007940   SH3BP5       
PDB
6IXV     E-value=8.42524e-38,     Score=395

Ontologies

Topology

Length:
458
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00404
outside
1  -  458
 
 

Population Genetic Test Statistics

Pi
175.276396
Theta
22.58212
Tajima's D
-1.394819
CLR
137.213289
CSRT
0.0756962151892405
Interpretation
Uncertain
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