Gene

KWMTBOMO12201

Pre Gene Modal

BGIBMGA014163

Annotation

vitellogenin_receptor_[Bombyx_mori]

Location

Bomo_Chr20(-):9298983-9307369      View in EpiBrowser

Full name

Putative vitellogenin receptor       + More
Vitellogenin receptor      

Alternative Name

Protein yolkless

Location in the cell

Extracellular   Reliability : 3.443

CDS

ATGATGGGGTTCCCACCAAAGAGCGTATCGTGCAAGCCCGGGTACTATCAATGCCGCGACCGGGAGTGTATAGAGCTGAAGAAGCGCTGCGACGGACACCAGGACTGTTTTGATTACTCCGACGAGGAAGAGTGTGATGAGCCAGTTGTCGTGGAGGAGCCGAAAATACATCGTTGTGCCGAATGGGAGTACAGTTGCGAGCGTAACAGAAGTATCTGTTTACCGATTACGGCAAGGTGCAACATGAAAACCGACTGCCCTGGTGGAACGGATGAGATAGGCTGCGACTACCGGTGCACTCCTCACGGCATGTTCGGTTGCAAGCAGCAGATCCGGTGCTTGGCCATGAACCGGGTTTGCGACGGAAACAAGGAGTGCGACGATGGATCTGATGAGACGCCCGACGCTTGCGCTCTCGTCAACAGAACCTCCCACCTGTACCCGGTGATGCTGTATCCGGCAGCAGAGTGCCGCGACGGATTCCTCTGCGGCAACGGTCAATGCATCGAGTGGGCGGAAGTGTGCGACCGCACCCCCAACTGCTTCGACGGATCGGACGAGAGCATCCACTGCTTCTCGGCGTGCGACAACAACACGTGCGCCCACGCGTGCCAGGCCACGCCGCTGGGGCCGCGCTGCCTGTGTCCGGCCGGGTACAGCGCCGCGCCGGACCGCCGGACGTGCGCCGACGTGGACGAGTGCCGCGCGGGACTGTGCTCGCAGGCCTGCGTCAACACCCCCGGCTCCTTCCTCTGCTCGTGCCATCACGGGTACGCGCTTAGGTCCGACAGACGTTCTTGCAAGGCCGTCACCGGGAACATGTCCATACTGTACGTGTCTGGCAACACCGTGCGCTCCGTCTCGGCTGACGGCTACGGCGCCATAGAGTACAGCGACCCGGACCTTGGCGATATCACTGATTTGGATTTCAATGTTAGAACGAAGCGTTTGTATGTGACGTCTACGGAGTCGGGGAAGCTGATAGAATTGAACGTGACACATGACGTGGTCGCCGTGACGAACGTCGGACGGCCGACCAGGGTGGCAGTGGACTGGGTGACGGGCAACGTGTACTTCGCGGACAGCACGCCGGGTGCTAGCTGCGTGAGGGTCTGTGACGTCACCAGGAGGAGATGCGCCAGGCTGCAGAAGATACCCTCTGACGCAACGGTTAGTGCACGTCCAGAACTTGTTGTATACTGA

Protein

MMGFPPKSVSCKPGYYQCRDRECIELKKRCDGHQDCFDYSDEEECDEPVVVEEPKIHRCAEWEYSCERNRSICLPITARCNMKTDCPGGTDEIGCDYRCTPHGMFGCKQQIRCLAMNRVCDGNKECDDGSDETPDACALVNRTSHLYPVMLYPAAECRDGFLCGNGQCIEWAEVCDRTPNCFDGSDESIHCFSACDNNTCAHACQATPLGPRCLCPAGYSAAPDRRTCADVDECRAGLCSQACVNTPGSFLCSCHHGYALRSDRRSCKAVTGNMSILYVSGNTVRSVSADGYGAIEYSDPDLGDITDLDFNVRTKRLYVTSTESGKLIELNVTHDVVAVTNVGRPTRVAVDWVTGNVYFADSTPGASCVRVCDVTRRRCARLQKIPSDATVSARPELVVY

Description

Involved in uptake of vitellogenin by endocytosis. Expression is regulated by the juvenile hormone analog, methoprene (in vitro).

Keywords

Alternative splicing   Cell membrane   Complete proteome   Disulfide bond   EGF-like domain   Endocytosis   Glycoprotein   Membrane   Phosphoprotein   Receptor   Reference proteome   Repeat   Signal   Transmembrane   Transmembrane helix   Calcium  

Feature

chain  Putative vitellogenin receptor
splice variant  In isoform A.

Uniprot

Q66NE3   K4MUW4   Q66NE4   E2FLQ4   H2CLV8   H9JX98   + More
A0A385LM65   A0A2A4JF17   A0A2D0VP24   M1L4G2   D9ZFI0   A0A0N1PFQ7   A0A194QLA3   A0A1Z2RRL4   A0A385HW27   A0A212FF10   A0A0T6B1R3   A0A2S1XV31   A0A1B6CX71   A0A1L8E338   A0A3G1KL05   X1WIS9   A0A1B1UZF6   A0A0B4ZZA6   B7QMR1   A0A2I4PYC0   K7IWA8   A0A139WE08   A0A232F2C2   Q7PS28   A0A0M4ETD4   A0A182JZY0   A0A2W1B456   A0A182UAS0   A0A2Y9D3I2   A0A293M1D3   A0A182IAT1   A0A182T7F8   A0A182RMV4   A0A0P8XJ28   A0A147BAB1   B3MZU7   A0A310S5G3   P98163-2   A0A0D4RRS9   P98163   A0A0L7QUY6   A0A182W5F8   A0A1S4FH50   A0A2A3EJ30   B4Q2Q9   A0A182XXV7   B3NVV7   E2BHT7   Q16GY3   O76952   D5KXW4   A0A182G7W8   B4IGA9   Q171G8   A0A1Y1N8E6   E0VAH7   A0A0M9A5Y8   Q2YI44   A0A151WPZ7   B1Q2W6   T1E9W2   W4VRI0   A0A087ZPZ1   A0A1W4VH45   A0A2J7QQP4   A0A084WEK1   A0A0Q9XEB7   A0A0C9QAX1   Q6X0I2   B4L5J5   B4JWV0   A0A151INQ8   A0A0Q9WBK4   B4M308   B4H0I5   Q29H17   Q8MP02   A0A0K8WJW4   A0A2I7G3Y1   A0A0K8U2F7   A0A131YJ60   U5KCA6   A0A3B5M1J7   A0A182PBK9   A0A182IR31   S4TMC4   A0A0S7FWJ3   A0A1W5KSB7   A0A1A9W8J7   A0A3B5ME55  

Pubmed

23515308    19121390    20955241    26354079    28605547    22118469    + More
29718485    27464714    20075255    18362917    19820115    28648823    12364791    14747013    17210077    28756777    17994087    7878005    10731132    12537572    18327897    17550304    25244985    20798317    17510324    8799131    11881811    26483478    28004739    20566863    16403020    24438588    15056367    15632085    16033432    29054547    26830274    24128609    26262609   

EMBL

AY676608    AAU12845.1    JQ809472    AFV32171.1    AY676607    AAU12844.1    + More
HM172611    ADK94452.1    JN003583    AEJ88360.1    BABH01035721    MH745217    AYA29178.2    NWSH01001818    PCG70030.1    KT899978    AOX13593.1    KC181922    AGF33811.2    GU983858    ADK94033.1    KQ461113    KPJ08910.1    KQ459053    KPJ04221.1    KY963162    ASA46482.1    MG799569    AXY55007.1    AGBW02008886    OWR52293.1    LJIG01016164    KRT81424.1    MF622539    AWJ95281.1    GEDC01019209    JAS18089.1    GFDF01000931    JAV13153.1    KY986532    ATU47286.1    ABLF02017882    ABLF02017885    ABLF02017888    ABLF02017889    KX428486    ANW09597.1    KM085006    AJD79559.1    ABJB011082826    DS972524    EEC20133.1    KY373243    AQS83398.1    KQ971355    KYB26208.1    NNAY01001168    OXU24904.1    AAAB01008846    EAA06264.6    CP012528    ALC49752.1    KZ150467    PZC70778.1    GFWV01009983    MAA34712.1    APCN01001317    APCN01001318    CH902635    KPU74830.1    GEIB01000012    JAR87707.1    EDV33898.1    KQ769958    OAD52717.1    U13637    AE014298    BT003478    BT150470    AJV26740.1    KQ414731    KOC62359.1    KZ288227    PBC31775.1    CM000162    EDX01653.2    CH954180    EDV47122.1    GL448324    EFN84770.1    CH478226    EAT33503.1    L77800    AH010501    AAC28497.1    AAK15810.1    GU723297    ADE34166.1    JXUM01046908    JXUM01046909    KQ561496    KXJ78386.1    CH480835    EDW48843.1    CH477456    EAT40623.1    GEZM01010121    JAV94182.1    DS235006    EEB10383.1    KQ435746    KOX76539.1    AM050637    CAJ19121.1    KQ982851    KYQ49878.1    AB299015    BAG14342.1    GAMD01001553    JAB00038.1    GANO01003098    JAB56773.1    NEVH01012083    PNF30911.1    ATLV01023220    KE525341    KFB48645.1    CH933811    KRG06924.1    GBYB01000374    JAG70141.1    AY262832    AAP92450.1    EDW06454.1    CH916376    EDV95226.1    KQ976914    KYN07112.1    CH940651    KRF82061.1    EDW65183.2    CH479200    EDW29780.1    CH379064    EAL31942.2    AB077047    BAC02725.2    GDHF01000878    JAI51436.1    KY781176    AUQ44344.1    GDHF01031628    JAI20686.1    GEDV01010025    JAP78532.1    JX846592    AGQ57038.1    JX469118    AGE83235.1    GBYX01460207    GBYX01460205    JAO21359.1    KR401221    AMZ04157.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000007819    + More
UP000001555    UP000002358    UP000007266    UP000215335    UP000007062    UP000092553    UP000075881    UP000075902    UP000076407    UP000075840    UP000075901    UP000075900    UP000007801    UP000000803    UP000053825    UP000075920    UP000242457    UP000002282    UP000076408    UP000008711    UP000008237    UP000008820    UP000069940    UP000249989    UP000001292    UP000009046    UP000053105    UP000075809    UP000005203    UP000192221    UP000235965    UP000030765    UP000009192    UP000001070    UP000078542    UP000008792    UP000008744    UP000001819    UP000261380    UP000075885    UP000075880    UP000091820   

PRIDE

Q66NE3    Q66NE4    E2FLQ4    H9JX98    P98163    B1Q2W6    + More
Q6X0I2   

Pfam

PF07645   EGF_CA        + More
PF00057   Ldl_recept_a
PF00058   Ldl_recept_b
PF12662   cEGF
PF00008   EGF
PF09734   Tau95
PF17682   Tau95_N

Interpro

IPR000152   EGF-type_Asp/Asn_hydroxyl_site        + More
IPR023415   LDLR_class-A_CS       
IPR018097   EGF_Ca-bd_CS       
IPR013032   EGF-like_CS       
IPR000742   EGF-like_dom       
IPR040093   LRAD1       
IPR011042   6-blade_b-propeller_TolB-like       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR000033   LDLR_classB_rpt       
IPR001881   EGF-like_Ca-bd_dom       
IPR002172   LDrepeatLR_classA_rpt       
IPR036055   LDL_receptor-like_sf       
IPR026823   cEGF       
IPR001190   SRCR       
IPR006612   THAP_Znf       
IPR003892   CUE       
IPR019136   TF_IIIC_su-5_HTH       
IPR041499   Tau95_N       

SUPFAM

SSF57184   SSF57184        + More
SSF57424   SSF57424       

Gene 3D

2.120.10.30     4.10.400.10    

CDD

cd00112  LDLa

ProteinModelPortal

Q66NE3   K4MUW4   Q66NE4   E2FLQ4   H2CLV8   H9JX98   + More
A0A385LM65   A0A2A4JF17   A0A2D0VP24   M1L4G2   D9ZFI0   A0A0N1PFQ7   A0A194QLA3   A0A1Z2RRL4   A0A385HW27   A0A212FF10   A0A0T6B1R3   A0A2S1XV31   A0A1B6CX71   A0A1L8E338   A0A3G1KL05   X1WIS9   A0A1B1UZF6   A0A0B4ZZA6   B7QMR1   A0A2I4PYC0   K7IWA8   A0A139WE08   A0A232F2C2   Q7PS28   A0A0M4ETD4   A0A182JZY0   A0A2W1B456   A0A182UAS0   A0A2Y9D3I2   A0A293M1D3   A0A182IAT1   A0A182T7F8   A0A182RMV4   A0A0P8XJ28   A0A147BAB1   B3MZU7   A0A310S5G3   P98163-2   A0A0D4RRS9   P98163   A0A0L7QUY6   A0A182W5F8   A0A1S4FH50   A0A2A3EJ30   B4Q2Q9   A0A182XXV7   B3NVV7   E2BHT7   Q16GY3   O76952   D5KXW4   A0A182G7W8   B4IGA9   Q171G8   A0A1Y1N8E6   E0VAH7   A0A0M9A5Y8   Q2YI44   A0A151WPZ7   B1Q2W6   T1E9W2   W4VRI0   A0A087ZPZ1   A0A1W4VH45   A0A2J7QQP4   A0A084WEK1   A0A0Q9XEB7   A0A0C9QAX1   Q6X0I2   B4L5J5   B4JWV0   A0A151INQ8   A0A0Q9WBK4   B4M308   B4H0I5   Q29H17   Q8MP02   A0A0K8WJW4   A0A2I7G3Y1   A0A0K8U2F7   A0A131YJ60   U5KCA6   A0A3B5M1J7   A0A182PBK9   A0A182IR31   S4TMC4   A0A0S7FWJ3   A0A1W5KSB7   A0A1A9W8J7   A0A3B5ME55  

PDB

5B4X     E-value=7.23356e-33,     Score=351

KEGG

692651    no KO assigned | (RefSeq) Vgr; vitellogenin receptor

GO

GO:0016021   GO:0005509   GO:0005739   GO:0005044   GO:0003677   GO:0016787   GO:0004714   GO:0060828   GO:0030509   GO:0048513   GO:0030135   GO:0005886   GO:0048477   GO:0031410   GO:0008196   GO:0006897   GO:0006898   GO:0038024   GO:0005515   GO:0030163   GO:0016788   GO:0007165   GO:0005525   GO:0008033   GO:0003676  

PANTHER

PTHR22722:SF5  

Subcellular location

Cell membrane  
Membrane  

Length:

400

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00497

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00166

outside

1  -  400

 

 

Pi

350.019948

Theta

190.629946

Tajima's D

2.977596

CLR

0.103877

CSRT

0.977601119944003

Interpretation

Uncertain