Gene

KWMTBOMO12200

Annotation

vitellogenin_receptor_[Antheraea_pernyi]

Location

Bomo_Chr20(-):9292224-9298139      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.941

CDS

ATGTTCTACTGCGTCCAGCGCGGCCACGAGTCCGTGGTCTGGTCCGCCTCGCTCTCCGGCCGGAGCGCCCTGGACCTCCTCCACGTGACCCAGTGCTCGGGATTAGCTGCCGATTCGTTCACGAGGAGGCTGTACGTGGCAGAGACTGCGCCCCCCCACATCATGGTGGTCGACTTCGATGGAAAGAATCCCAAGAAGATCCTAACGGAACGTCCACAGCTGCAAGCGCCCCACGCCTTGGCGCTCTTCGAAGACCACATATACTATTTGGTGGGCGACTCGTACCGCCTCGGGCGCTGCCTGCTCCACGGCCCGAAGAACTGCGAGACCTACATCTACAGGGTGTTCGACGCGAACACCTTCGTCATCAGACACGAGAGCATCCAGCGCGACGACCTGGTCAACGAGTGCGCCGCCCACGACTGCTCCAATGTGTGCGTGCTCGAGAAGGCGCCGGTGTGTGTCTGCGACGACGGGCACGTCCGTGACGACGGGAACTGTGACCCCAGCAACAAAAACGAGCTCCCCCTGTTCAACGGCTGGACGTACCAGGACTATCAGCGCGGTCACCGCGCCAGCATCACCGTCGTCATCGCGGTCCTCGTGCTGTTCCTCGTGTACATAGCACTGTTTATATATTATCACTTCGTCTATAAACCAAAGAGGAAGCGGTCCACGGCTTATACAGAGGTGAGGTTCCAGAACAGCTCCGACGAAGCAGCGCAGTTGTCTTGCAGCCCGGCAGTCCAAATGAATGGAAATCAACTTATAAACGGTAACGAATTCGTGAACCCGCTCCAGTACGTGCGCAATGTGTGGCAACAATCGATCAGAAGGAAGCCACGTCCTGTTTGTACAGCTGGCCTGTCAATAGCAGTGCCCAACTCTCCACAGCAAGACTTCTCCGATACAGAGTCAGACCTAGACGATCGAGAAACTAAGAGGTTCATCCGGAAAAATAAATTTCTCAATTAA

Protein

MFYCVQRGHESVVWSASLSGRSALDLLHVTQCSGLAADSFTRRLYVAETAPPHIMVVDFDGKNPKKILTERPQLQAPHALALFEDHIYYLVGDSYRLGRCLLHGPKNCETYIYRVFDANTFVIRHESIQRDDLVNECAAHDCSNVCVLEKAPVCVCDDGHVRDDGNCDPSNKNELPLFNGWTYQDYQRGHRASITVVIAVLVLFLVYIALFIYYHFVYKPKRKRSTAYTEVRFQNSSDEAAQLSCSPAVQMNGNQLINGNEFVNPLQYVRNVWQQSIRRKPRPVCTAGLSIAVPNSPQQDFSDTESDLDDRETKRFIRKNKFLN

Uniprot

H2CLV8   K4MUW4   E2FLQ4   Q66NE3   A0A385LM65   A0A2A4ISY0   + More
A0A2A4JF17   A0A2H1VG11   M1L4G2   A0A2D0VP24   A0A194QLA3   A0A0N1PFQ7   A0A1Z2RRL4   D9ZFI0   H9JX99   A0A385HW27   A0A212FF10   A0A2S1XV31   A0A1L8E338   Q2YI44   A0A087ZPZ1   A0A2A3EJ30   A0A2P8Y220   A0A0M9A5Y8   A0A0C9QAX1   A0A2J7QQP4   A0A310S5G3   W8BW91   A0A154NY90   A0A0T6B1R3   A0A0L7QUY6   Q1T728   A0A3B0JXJ9   A0A1I8NZ81   A0A0N4ZHD7   A0A195AZV5   A0A2I4PYC0  

Pubmed

23515308    26354079    28605547    20955241    19121390    22118469    + More
29718485    16403020    29403074    24495485    17296498    27464714   

EMBL

JN003583    AEJ88360.1    JQ809472    AFV32171.1    HM172611    ADK94452.1    + More
AY676608    AAU12845.1    MH745217    AYA29178.2    NWSH01007661    PCG62875.1    NWSH01001818    PCG70030.1    ODYU01002362    SOQ39767.1    KC181922    AGF33811.2    KT899978    AOX13593.1    KQ459053    KPJ04221.1    KQ461113    KPJ08910.1    KY963162    ASA46482.1    GU983858    ADK94033.1    BABH01035721    MG799569    AXY55007.1    AGBW02008886    OWR52293.1    MF622539    AWJ95281.1    GFDF01000931    JAV13153.1    AM050637    CAJ19121.1    KZ288227    PBC31775.1    PYGN01001032    PSN38293.1    KQ435746    KOX76539.1    GBYB01000374    JAG70141.1    NEVH01012083    PNF30911.1    KQ769958    OAD52717.1    GAMC01000970    JAC05586.1    KQ434782    KZC04587.1    LJIG01016164    KRT81424.1    KQ414731    KOC62359.1    AB255883    BAE93218.1    OUUW01000011    SPP86795.1    KQ976692    KYM77741.1    KY373243    AQS83398.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000005204    UP000007151    UP000005203    + More
UP000242457    UP000245037    UP000053105    UP000235965    UP000076502    UP000053825    UP000268350    UP000095300    UP000038045    UP000078540   

PRIDE

E2FLQ4    Q66NE3    H9JX99   

Pfam

PF00057   Ldl_recept_a        + More
PF00058   Ldl_recept_b
PF07645   EGF_CA
PF12662   cEGF

Interpro

IPR011042   6-blade_b-propeller_TolB-like        + More
IPR040093   LRAD1       
IPR000742   EGF-like_dom       
IPR018097   EGF_Ca-bd_CS       
IPR013032   EGF-like_CS       
IPR023415   LDLR_class-A_CS       
IPR000152   EGF-type_Asp/Asn_hydroxyl_site       
IPR002172   LDrepeatLR_classA_rpt       
IPR036055   LDL_receptor-like_sf       
IPR001881   EGF-like_Ca-bd_dom       
IPR000033   LDLR_classB_rpt       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR026823   cEGF       
IPR001190   SRCR       

SUPFAM

SSF57424   SSF57424        + More
SSF57184   SSF57184       

Gene 3D

2.120.10.30     4.10.400.10    

CDD

cd00112  LDLa

ProteinModelPortal

H2CLV8   K4MUW4   E2FLQ4   Q66NE3   A0A385LM65   A0A2A4ISY0   + More
A0A2A4JF17   A0A2H1VG11   M1L4G2   A0A2D0VP24   A0A194QLA3   A0A0N1PFQ7   A0A1Z2RRL4   D9ZFI0   H9JX99   A0A385HW27   A0A212FF10   A0A2S1XV31   A0A1L8E338   Q2YI44   A0A087ZPZ1   A0A2A3EJ30   A0A2P8Y220   A0A0M9A5Y8   A0A0C9QAX1   A0A2J7QQP4   A0A310S5G3   W8BW91   A0A154NY90   A0A0T6B1R3   A0A0L7QUY6   Q1T728   A0A3B0JXJ9   A0A1I8NZ81   A0A0N4ZHD7   A0A195AZV5   A0A2I4PYC0  

PDB

1IJQ     E-value=0.00273468,     Score=95

KEGG

692651    no KO assigned | (RefSeq) Vgr; vitellogenin receptor

GO

GO:0016021   GO:0005509   GO:0005044   GO:0005739  

PANTHER

PTHR22722:SF5  

Length:

324

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.88282

Exp number, first 60 AAs:

0.00438

Total prob of N-in:

0.21247

outside

1  -  195

TMhelix

196  -  218

inside

219  -  324

 

 

Pi

28.900724

Theta

42.595224

Tajima's D

-0.474611

CLR

0.262196

CSRT

0.248387580620969

Interpretation

Uncertain