Gene

KWMTBOMO12198

Pre Gene Modal

BGIBMGA014166

Annotation

PREDICTED:_TLD_domain-containing_protein_1_isoform_X3_[Papilio_polytes]

Location

Bomo_Chr20(-):9245190-9285739      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.028

CDS

ATGGGTAACACAAGCAAGAAACTAGCAGCAAAATGCACTTTATTGACGAAAGATGAACAGAAGCATGTTGCAGCCACATTCAGGGCAGCCAGTAAGAATTCGGAGAGGATACGGGAGGATGATCTCATCAAATTTTGGGGACCCCAAATCGATCCCCGGCTGGCGCAGTACTTAACGAATTTCCTCTTCGGTTCCGGACAAGAGAAGTCGCCCTCGGTCGACTTCAATCGTTTCGCTGAACTATATGTTTATAATGTTAGAGGCACTGTCGATGAAAGAATGATGGTCACCTACAACAGTCTCGGGAAAGACTACAATGAAGAAATCGAATTGCCGTATCAGCTTCTGCGAGAGTACTGCGAAAGCATAGCCTCGACTTACATCAAGATCCTCAAGTCCTCGTCGTCGAAGCGCGCCCAGACCTGGATCAGCAAAGGGTTCAGGGGTCGGGCGTGCCACGTGCAGGCCCTGGGCGAGGCCGTCGCCGCCAGTATAGGAGGAGACATGGATTCGGCACAGCATCATTGTACAGCCAATCAGTTGTCTAGTTGGTTACAGCAGAACACATTGCTGAAGCAGTTGGCCGAGCTGGTCTTCGTCAATCTCTACGGCATCAACAAGAAGCAAGGCGACGAGAGTCCAACCCCGATGCCGACGTTGCCATCGCTCCTACCCCTGCCTGAAGGTCTAGAGTCGATGCCAGATTATCCAGCCTTCATCGACTTATCACACATCGTGTGGCTGAACAGCCACATACCCCAGAAATACCAGCACAAGTGGAGGTTCCTGTTCTCCTCACATATCCACGGAGAGTCCTTCTCGACCATGGCAGGCCGCATCATCGACCAGGGCCCGTCGATTCTGATCATCGAAGACAACTCGGGCTACATCTTCGGAGGCTTCGCCCCGGAGGCGTGGTCCCTGGGCCCCAACTTCGGCGGCACGGAGGACTCCTTCCTGTTCACGGTGGCGCCCAAGATGAGGGTCTACCCGGCGACCACGTACAACGACCACTACCAGTACATGAACCATCACACGAAGACTTTACCGAACGGATTGCTGATGGGCGGCCAGTTCAATTTCGGCGGGATATGGGTGAACGCGGATCCTTTCGGCGAAGGGTCCTCGGCGGAGTCGTGCAGCACGTACCGAGGGTACAAGCGGCTCAGCAGGGAGCCCAGCTTCAGGATCCGGAGCCTGGAGGTGTGGGGCGTCGGCGACAAGCCGGTCATCGACAAGGACTCGGATGAACGGGAAGTCAGCGTGTTGGACACCAATCCAGAAGCCAAAGCCATCTTAGAGTTGGCAGGTAGAACACGGCACAGCGAGGGTATCCGCGAACCCCCACCCTTATAG

Protein

MGNTSKKLAAKCTLLTKDEQKHVAATFRAASKNSERIREDDLIKFWGPQIDPRLAQYLTNFLFGSGQEKSPSVDFNRFAELYVYNVRGTVDERMMVTYNSLGKDYNEEIELPYQLLREYCESIASTYIKILKSSSSKRAQTWISKGFRGRACHVQALGEAVAASIGGDMDSAQHHCTANQLSSWLQQNTLLKQLAELVFVNLYGINKKQGDESPTPMPTLPSLLPLPEGLESMPDYPAFIDLSHIVWLNSHIPQKYQHKWRFLFSSHIHGESFSTMAGRIIDQGPSILIIEDNSGYIFGGFAPEAWSLGPNFGGTEDSFLFTVAPKMRVYPATTYNDHYQYMNHHTKTLPNGLLMGGQFNFGGIWVNADPFGEGSSAESCSTYRGYKRLSREPSFRIRSLEVWGVGDKPVIDKDSDEREVSVLDTNPEAKAILELAGRTRHSEGIREPPPL

Uniprot

A0A2A4JD53   A0A212FEW3   A0A194QF98   A0A2H1VHE7   A0A2H1VEB1   A0A2W1BCP1   + More
A0A2W1BCJ2   A0A1J1HP67   D6WR86   A0A182PJR5   A0A182JDR3   A0A2M4APW6   A0A084W7L2   A0A336M7P5   A0A182V7V8   A0A182TDP9   A0A182X1F4   A0A182L2N5   Q7Q389   A0A182IED4   W5JD64   A0A182F1B5   A0A182RU64   A0A182XZQ5   A0A182W7M5   A0A1L8DCT9   A0A182NTF3   A0A182MVL5   A0A182Q8D2   U4V0R7   A0A1Y1LC72   B0W0A2   A0A182GVB8   Q16WD5   A0A1Q3F8M4   A0A1Q3F908   N6TN42   A0A182SG07   U4UZY5   U4UT25   A0A0L7L1Y8   A0A182K0E4   A0A1W4XN09   A0A2M4ARS3   A0A1W4XNV9   W8BXF1   A0A0K8TK93   A0A1I8NY91   T1PHK0   A0A1I8N8L2   B4JQN6   A0A0A1XE98   B4LS39   A0A3B0K7M3   B3MKA1   Q29N86   B4G839   B4MZW0   A0A0K8VDJ3   A0A034WN85   B4NZL5   B4KKC4   A0A195C752   Q9VM22   A0A026WLV4   A0A3L8DJ36   B4HY53   B4Q5F0   A0A195D7R6   A0A151X4K9   A0A232F428   A0A195BR37   A0A158NDT3   A0A1W4W8S1   A0A0J7KIV9   A0A195EY74   B3N6C0   E9IGM3   A0A2A3ELG9   A0A0M4E9E6   A0A088A0Y8   A0A0C9RXP5   A0A0L7QV01   A0A0M8ZWC6   A0A0R3NSD8   A0A1A9Z5Z6   D3TQY8   A0A1B0FD12   A0A1A9XYS2   A0A1B0GJJ6   A0A1A9UTY9   A0A1A9WUD7   A0A2J7RGK7   A0A1B6C7T1   A0A067RR72   A0A1B0C7L9  

Pubmed

22118469    26354079    28756777    18362917    19820115    24438588    + More
20966253    12364791    14747013    17210077    20920257    23761445    25244985    23537049    28004739    26483478    17510324    26227816    24495485    26369729    25315136    17994087    25830018    15632085    25348373    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24508170    30249741    22936249    28648823    21347285    21282665    20353571    24845553   

EMBL

NWSH01001818    PCG70027.1    AGBW02008886    OWR52295.1    KQ459053    KPJ04218.1    + More
ODYU01002573    SOQ40258.1    ODYU01002070    SOQ39116.1    KZ150467    PZC70776.1    KZ150394    PZC71037.1    CVRI01000014    CRK89747.1    KQ971354    EFA07660.2    GGFK01009489    MBW42810.1    ATLV01021261    KE525315    KFB46206.1    UFQT01000446    SSX24397.1    AAAB01008964    EAA12178.3    APCN01005201    ADMH02001723    ETN61298.1    GFDF01009812    JAV04272.1    AXCM01000920    AXCN02000707    KI210433    ERL96265.1    GEZM01060155    JAV71234.1    DS231817    EDS39641.1    JXUM01002584    JXUM01002585    JXUM01002586    JXUM01023292    JXUM01023293    JXUM01023294    JXUM01023295    JXUM01023296    KQ560657    KXJ81399.1    CH477570    EAT38883.1    GFDL01011115    JAV23930.1    GFDL01011038    JAV24007.1    APGK01028594    KB740694    ENN79438.1    KI208745    ERL95925.1    KI210432    ERL96262.1    JTDY01003463    KOB69518.1    GGFK01010150    MBW43471.1    GAMC01002614    GAMC01002613    GAMC01002612    GAMC01002611    JAC03943.1    GDAI01002969    JAI14634.1    KA648246    AFP62875.1    CH916372    EDV99216.1    GBXI01005022    JAD09270.1    CH940649    EDW64725.1    OUUW01000006    SPP82019.1    CH902620    EDV32485.1    CH379060    EAL33456.1    CH479180    EDW28519.1    CH963920    EDW77895.1    GDHF01015407    JAI36907.1    GAKP01001906    JAC57046.1    CM000157    EDW87764.1    CH933807    EDW12655.1    KQ978251    KYM95988.1    AE014134    AY069441    AAF52506.1    AAL39586.1    KK107152    EZA57037.1    QOIP01000007    RLU20173.1    CH480818    EDW51983.1    CM000361    CM002910    EDX04083.1    KMY88752.1    KQ981153    KYN08916.1    KQ982548    KYQ55224.1    NNAY01001003    OXU25524.1    KQ976424    KYM88424.1    ADTU01012965    LBMM01006932    KMQ90184.1    KQ981906    KYN33235.1    CH954177    EDV59207.1    GL763054    EFZ20190.1    KZ288215    PBC32568.1    CP012523    ALC38814.1    GBYB01013970    GBYB01013971    JAG83737.1    JAG83738.1    KQ414727    KOC62450.1    KQ435821    KOX72455.1    KRT03852.1    EZ423840    ADD20116.1    CCAG010001392    AJWK01021853    AJWK01021854    AJWK01021855    AJWK01021856    AJWK01021857    AJWK01021858    NEVH01003767    PNF39974.1    GEDC01027731    JAS09567.1    KK852513    KDR22244.1    JXJN01029085   

Proteomes

UP000218220    UP000007151    UP000053268    UP000183832    UP000007266    UP000075885    + More
UP000075880    UP000030765    UP000075903    UP000075902    UP000076407    UP000075882    UP000007062    UP000075840    UP000000673    UP000069272    UP000075900    UP000076408    UP000075920    UP000075884    UP000075883    UP000075886    UP000030742    UP000002320    UP000069940    UP000249989    UP000008820    UP000019118    UP000075901    UP000037510    UP000075881    UP000192223    UP000095300    UP000095301    UP000001070    UP000008792    UP000268350    UP000007801    UP000001819    UP000008744    UP000007798    UP000002282    UP000009192    UP000078542    UP000000803    UP000053097    UP000279307    UP000001292    UP000000304    UP000078492    UP000075809    UP000215335    UP000078540    UP000005205    UP000192221    UP000036403    UP000078541    UP000008711    UP000242457    UP000092553    UP000005203    UP000053825    UP000053105    UP000092445    UP000092444    UP000092443    UP000092461    UP000078200    UP000091820    UP000235965    UP000027135    UP000092460   

PRIDE

Q9VM22   

Pfam

PF07534   TLD        + More
PF01436   NHL

Interpro

IPR006571   TLDc_dom        + More
IPR017974   Claudin_CS       
IPR011042   6-blade_b-propeller_TolB-like       
IPR001258   NHL_repeat       
IPR013017   NHL_repeat_subgr       
IPR011992   EF-hand-dom_pair       

SUPFAM

SSF47473   SSF47473       

Gene 3D

2.120.10.30    

ProteinModelPortal

A0A2A4JD53   A0A212FEW3   A0A194QF98   A0A2H1VHE7   A0A2H1VEB1   A0A2W1BCP1   + More
A0A2W1BCJ2   A0A1J1HP67   D6WR86   A0A182PJR5   A0A182JDR3   A0A2M4APW6   A0A084W7L2   A0A336M7P5   A0A182V7V8   A0A182TDP9   A0A182X1F4   A0A182L2N5   Q7Q389   A0A182IED4   W5JD64   A0A182F1B5   A0A182RU64   A0A182XZQ5   A0A182W7M5   A0A1L8DCT9   A0A182NTF3   A0A182MVL5   A0A182Q8D2   U4V0R7   A0A1Y1LC72   B0W0A2   A0A182GVB8   Q16WD5   A0A1Q3F8M4   A0A1Q3F908   N6TN42   A0A182SG07   U4UZY5   U4UT25   A0A0L7L1Y8   A0A182K0E4   A0A1W4XN09   A0A2M4ARS3   A0A1W4XNV9   W8BXF1   A0A0K8TK93   A0A1I8NY91   T1PHK0   A0A1I8N8L2   B4JQN6   A0A0A1XE98   B4LS39   A0A3B0K7M3   B3MKA1   Q29N86   B4G839   B4MZW0   A0A0K8VDJ3   A0A034WN85   B4NZL5   B4KKC4   A0A195C752   Q9VM22   A0A026WLV4   A0A3L8DJ36   B4HY53   B4Q5F0   A0A195D7R6   A0A151X4K9   A0A232F428   A0A195BR37   A0A158NDT3   A0A1W4W8S1   A0A0J7KIV9   A0A195EY74   B3N6C0   E9IGM3   A0A2A3ELG9   A0A0M4E9E6   A0A088A0Y8   A0A0C9RXP5   A0A0L7QV01   A0A0M8ZWC6   A0A0R3NSD8   A0A1A9Z5Z6   D3TQY8   A0A1B0FD12   A0A1A9XYS2   A0A1B0GJJ6   A0A1A9UTY9   A0A1A9WUD7   A0A2J7RGK7   A0A1B6C7T1   A0A067RR72   A0A1B0C7L9  

PDB

4ACJ     E-value=1.86787e-12,     Score=176

KEGG

101738608    no KO assigned | (RefSeq) TLD domain-containing protein 1

GO

Length:

451

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00978

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00831

outside

1  -  451

 

 

Pi

215.09139

Theta

174.626866

Tajima's D

0.981377

CLR

0.256857

CSRT

0.654067296635168

Interpretation

Uncertain