SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12194
Pre Gene Modal
BGIBMGA014169
Annotation
PREDICTED:_uncharacterized_protein_LOC101738342_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.991
 

Sequence

CDS
ATGAACGAGGATTACTGGAGGGTCGAAGGGAAAAAGAGGGAAATGTCTATGGTCGAAGGGTTCGATAGCAAAACCTTTGATTTGATCGTGAGGTTTGACTGCAGGGGGAAGTACGTGGCTACCGTCTCCACGGAGCGAGAGGAGATCTGCGTTTGGGATGTATCGAAATGTCAACTGGTGAGGAAAATAGTGGGCGTGACGCACCCCATCAATTTGGTGCCCATTGATGAGTACAGATGCGTAGTGCTGTGTCGACGGGAGCTCAGAGTGTATAACCTCGACCAGGGCACTTTCTTGGTGGCGTTGAAGGGTGTAATGAACCAGAAGATGCCCTACTACGGTCTCCACGACAGCACCCACCTCGTTGCCCTCTCCCGGAATCGGATGTACGTGAACCTAATGAACATCGAGACCGGTGATTGCGTAACGACGTTCAAGGCTGGCGAGGACAGGTTCCTGAACTCGTTACTCGTGTCCGGGGACGGAAGGGTGCTGGTGTGCGGAGACGAGACCCAGAAGCCGTTCCCGCTGCTGGTCTGGTCGCTCACGTCAAGGAAGCTGCTTTACGACCTTCGGATCCCGCATCACGACTTCGTCACGTCCAAAGCTGCTATTACTTACGAAGGGTCCTACGTGTGCGTCGTGTCTCGTGAGCTGGACGAGCCCAGCCCAAACTTCATAGTGGTGTACGACCTGCAGTCCGGCACGCTGTTCAAGAAGTGGAAGCCGGGCTGCGACACCGTGGCGCTGGCCATCAGCTCGGCCGACGGCTGCGTCGTCTCCGGCCTGGCCGACACGAGGATACTCGTTTGGGATTTAGTGACCGGCAACTGCCGCGTGACTCTCCGCGGACACGTGTCGGCTCCGTCCCGGCTGCGGCTGGCGCGCGCGGGCGGTGTGCTGCTGTCCCAGGACGATACCTGCCGCGACCTGTCCGTGCGGCTGTGGGACCTGCACACGGGCAAGCTGATAGCGGTGTACACGCCCCCCGAGAGGATAACGTCCTGCGAGGTGCTCCTCGGGGGCTCGGTGCTCGCCGTGGCGCTGGAGAACTGTCGGGACATCCTCTGCGTTCAACTGCACGGGCCCCCGGGCGACGCGGTGGCCGCCGGCCGGGACCTCGAGCACGACGACGGACCCTACGGGGACCCCGCACTGCAAGGGAGGACCTTAGACGTGAAGGCCGCCGAAACGTCATAG
Protein
MNEDYWRVEGKKREMSMVEGFDSKTFDLIVRFDCRGKYVATVSTEREEICVWDVSKCQLVRKIVGVTHPINLVPIDEYRCVVLCRRELRVYNLDQGTFLVALKGVMNQKMPYYGLHDSTHLVALSRNRMYVNLMNIETGDCVTTFKAGEDRFLNSLLVSGDGRVLVCGDETQKPFPLLVWSLTSRKLLYDLRIPHHDFVTSKAAITYEGSYVCVVSRELDEPSPNFIVVYDLQSGTLFKKWKPGCDTVALAISSADGCVVSGLADTRILVWDLVTGNCRVTLRGHVSAPSRLRLARAGGVLLSQDDTCRDLSVRLWDLHTGKLIAVYTPPERITSCEVLLGGSVLAVALENCRDILCVQLHGPPGDAVAAGRDLEHDDGPYGDPALQGRTLDVKAAETS

Summary

EMBL
BABH01035702    BABH01035703    NWSH01002091    PCG69217.1    ODYU01002053    SOQ39090.1    + More
KQ459053    KPJ04215.1    AGBW02007739    OWR54634.1    KQ461181    KPJ07756.1    RSAL01000042    RVE50791.1    ATLV01021262    ATLV01021263    KE525315    KFB46207.1    KQ971351    EFA06477.1    NEVH01016313    PNF25714.1    AXCM01007603    GDAI01002259    JAI15344.1    JXUM01071164    JXUM01071165    KQ562647    KXJ75414.1    DS231817    EDS39640.1    APCN01005201    AXCN02000707    PYGN01001311    PSN35793.1    GEZM01057544    JAV72263.1    GDUN01001116    JAN94803.1    AAAB01008964    GEDC01029411    JAS07887.1    GEDC01029512    JAS07786.1    GEDC01019726    GEDC01012215    JAS17572.1    JAS25083.1    LJIG01000593    KRT86347.1    CH477570    EAT38881.1    GGFK01004650    MBW37971.1    GGFK01004659    MBW37980.1    ADMH02001723    ETN61299.1    PNF25715.1    AY069732    AAL39877.1    GEDC01009699    JAS27599.1    GEDC01011343    JAS25955.1    GEDC01009382    JAS27916.1    GAMC01020547    JAB86008.1    GAKP01009656    JAC49296.1    CH917445    EDW05106.1    GBXI01012528    JAD01764.1    GDHF01029605    JAI22709.1    GDHF01015690    JAI36624.1    GDHF01027154    JAI25160.1    GBXI01010630    JAD03662.1    GECU01022729    JAS84977.1    JRES01000300    KNC32613.1    AJVK01012234    CH902620    EDV32030.1    GEBQ01028256    JAT11721.1    CH916372    EDV98773.1    GFDF01006138    JAV07946.1    CH933807    EDW12392.1    CP012523    ALC38018.1    CH940654    EDW57676.1    KRF77886.1    KRG03226.1    KRG03227.1    DS235200    EEB13187.1    JXUM01023277    KQ560657    KXJ81395.1    OUUW01000006    SPP82325.1    CH963857    EDW76218.1    CM000158    EDW90430.1    CH479184    EDW37140.1    AE014134    BT031096    AAF53816.2    ABX00718.1    CM002910    KMY91034.1    KMY91035.1    CH480822    EDW55774.1    CH379058    EAL34376.1    KRT03436.1    CH954179    EDV54641.1    CVRI01000014    CRK89749.1    JXJN01015339    CCAG010000397    ACPB03010447    GFTR01008716    JAW07710.1    GBHO01040801    JAG02803.1    LJIJ01000919    ODM93765.1    JTDY01004807    KOB67728.1    GGMR01002308    MBY14927.1    GFXV01007284    MBW19089.1    GDHC01014543    JAQ04086.1   
Pfam
PF05729   NACHT        + More
PF00400   WD40
PF13401   AAA_22
PF00084   Sushi
PF00095   WAP
Interpro
IPR019775   WD40_repeat_CS        + More
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR007111   NACHT_NTPase       
IPR003593   AAA+_ATPase       
IPR027417   P-loop_NTPase       
IPR030934   Intein_C       
IPR036322   WD40_repeat_dom_sf       
IPR000318   Nase_comp1_CS       
IPR000436   Sushi_SCR_CCP_dom       
IPR008197   WAP_dom       
IPR035976   Sushi/SCR/CCP_sf       
SUPFAM
SSF50998   SSF50998        + More
SSF52540   SSF52540       
SSF50978   SSF50978       
SSF57535   SSF57535       
Gene 3D
PDB
2OVR     E-value=2.31572e-07,     Score=131

Ontologies

Topology

Length:
399
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01093
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01512
outside
1  -  399
 
 

Population Genetic Test Statistics

Pi
197.340533
Theta
167.966034
Tajima's D
0.630387
CLR
0.236817
CSRT
0.554472276386181
Interpretation
Uncertain
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