SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12190
Pre Gene Modal
BGIBMGA014172
Annotation
PREDICTED:_uncharacterized_protein_LOC101737951_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.351
 

Sequence

CDS
ATGCACCGTTTTCAAAGACCAGCGTATATAGCTGATGGATTCGAGGACGATTGTGATGACCTCGTTCACAGATGTACCCAAGTTCAAACTCTTAGCTATGAGAAATTCTGCAACATATGGAAAGAAATGGATTTTGTGACTATATTTCACGGTAGAAATGCTACATCAGAGCTCGCTGAGCTTTCCGAGGAAGTGATACTCATAGCCAAGAAGTACATGGTCTCGACTACTAGCAACTTTGAGGAATCCGTGGCCGGTCTGTTTCTGGTGTATGCTCTGCTGAACCTCCAGCCGTTGCGTGGCTTCGCCGCGCTGAGGCTGATACCAGAGGACGTGCCCTCGATACAGCGGATCGAGAGGATCGCCAGACAGAATAGGAGATACGACGTGCTGTACATCTTGAGCAATGTGCTGATCAAGGGTCCGTGCCAGTGCCACGTGGCGCAGCGGGAGAGGGGCATGGAACGTTCCATAAAGAAGTATTTCGATAGCTACACTCCAGCTGATGACAGAGGCGAGAGGCCGCGCGGAGTCTTCTTCGGGCAAACCGAGGAAAGTGACCTACTAAAAGAACTCGGCAGGCTTGGAACTTTATATAAAGACGCAAAGAAAGCTCTAGCAGGCCCGAATGGCATCGAGAAGAGCTTGAATTATGTAAACGACGACCTGATGAGGCAAATGGACGCGTCGCTGAAGAAACTGGTCTACGGGATTTACGACAACGACAGCTCCAGCGATTCTGAGGGCTCCGAGGAGTCGCCGGCTCTAGAAGAGCACCCGCAGTCGATCAAAGAACGCGCCATGAAGTCGGCCGTGAAAGGCGTCCGGCACCTCACCGGAATAGCTGACAGGTCATCAGCAGCGAAGAGTACAACACTGTCACAATCGAGTTCCCACATGAATTCGACAAAGAGAACGATGGCCAGACAGATCGCCGCTATGCTGAGGGTGAACAGGAAGGCGAATGAATCAGCGAGTGACGCAGCCCAGGGGTCTCAGTCATCGTTACCGGAACTCGAGGACGGAGCCCCCGGCCCCAGCGCACAGAGCCAAGATAACAACAGAAAATCAAAACCGGCCCCGTCCAAGAAGCAGCCCATAAACAATGAAAGGCGAGCCCAATATAAGGTCGCTAAAAACGCCATGAAACGTAAGGAACAGATAAAGGTGGAGCTTAAAAACAAAAAAACAAAAACTAAATCGTACAGTGACAGCAGCGAAGAGACCACCGATGAAGACATCTCTGACGTTGATGATGATGAAGAAGGAAATGACAGTGTAGAACTACAAGCTGACTCCGTGCCAATAGTCATAGATAAGGGGGCACCGGAAATAGAAATCGAATTGATAGGCTTCGAGCAAAAAGAAGATGGGGTCTACGAACCCGTCAGACCGGAGGAGATTAAGTCTGAGATGAAATCAAAAGTGCGCGATAAGAGAGAACTGAAGAAAACTAGGATCAAAGGAATGTTTCAACGGTTAGGGATGCCTGCCATAGCTAACTTTAAGAACTCAACTGAGACGGAAGAAAAAAAGTAA
Protein
MHRFQRPAYIADGFEDDCDDLVHRCTQVQTLSYEKFCNIWKEMDFVTIFHGRNATSELAELSEEVILIAKKYMVSTTSNFEESVAGLFLVYALLNLQPLRGFAALRLIPEDVPSIQRIERIARQNRRYDVLYILSNVLIKGPCQCHVAQRERGMERSIKKYFDSYTPADDRGERPRGVFFGQTEESDLLKELGRLGTLYKDAKKALAGPNGIEKSLNYVNDDLMRQMDASLKKLVYGIYDNDSSSDSEGSEESPALEEHPQSIKERAMKSAVKGVRHLTGIADRSSAAKSTTLSQSSSHMNSTKRTMARQIAAMLRVNRKANESASDAAQGSQSSLPELEDGAPGPSAQSQDNNRKSKPAPSKKQPINNERRAQYKVAKNAMKRKEQIKVELKNKKTKTKSYSDSSEETTDEDISDVDDDEEGNDSVELQADSVPIVIDKGAPEIEIELIGFEQKEDGVYEPVRPEEIKSEMKSKVRDKRELKKTRIKGMFQRLGMPAIANFKNSTETEEKK

Summary

Uniprot
Pfam
PF09808   SNAPc_SNAP43
Interpro
IPR019188   SNAPc_SNAP43       
ProteinModelPortal

Ontologies

GO

Topology

Length:
512
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.13935
Exp number, first 60 AAs:
0
Total prob of N-in:
0.05977
outside
1  -  512
 
 

Population Genetic Test Statistics

Pi
201.007028
Theta
159.60369
Tajima's D
0.842431
CLR
12.017882
CSRT
0.615069246537673
Interpretation
Uncertain
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