Gene

KWMTBOMO12185

Pre Gene Modal

BGIBMGA014450

Annotation

PREDICTED:_uncharacterized_protein_LOC101742687_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr20(-):8981045-9006069      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.333

CDS

ATGTCAAGCTATGCTGGTCCTCCTCCTATCGTCGTTTTCCTCATTACTGAGGGTCGTGACTCCCCCGTTGCATCAGTTTCTCCCGTACGATTTCCCTCCATCTGCTGCGATCCTTATGGGGGGTTTACACGGGTGTTTCACCTTCGCAACATCCGCTGGGAGAGTCCAAGGTTCCTGTCCAAATCGTTCCTGGCCTTCGTTACCTTCAACCTCATCAACTACTCGTTGTTGGCAGCCGAGGTCCTTACGACGAACATCGCTGATACTTCTGCCGAGAAGAGGACCTTCTACCAGCACATATTCAATGGTTGTTACGCCGTTCTACTCTTCATCGTTGTCGTGTTCTTCCTCATCTACGGTGTAGAAGTATTCTTTAAGCTCCGCGGTGAGTTCCTGAAGGAGACCAAAGTATGCACCATAATATCGCCCCGTCCCGGAACCTCAGCCGACGGAGATGAAGCCCAGGATACGCTTGTCACTAAACAGGGTGCCGGTGGTGTCCCGCAACTGGCACGACCTGTGTTCCGGCTCGCCGAGATCGGGGTCGCAGTATGGTTCCCGTGCGCGCTGTGGAACTCGATGGCGCCCGAGCGGCTCTGGCTCCTGAACCCGCGCCGGCTGCTCGCCAGGCAGCTGGACGACGCCAAGCTCGCCGACCTGCTCGCGCAGCACCACCACGATGCCAAGAACGTGGAGAGTGACTCGCTCGTGGACAGCGTCGGCTCGAGCCGGGATTGCTGGATTTGCTACGACAGTTCCCGGGCGGAGCCCCTCATCAGGCCGTGTCGCTGCACCGGCGACGTGTCCGCCGTGCATCATGACTGCCTGAGCAGGTGGCTCGTCGAGAGTGGAGTGGGAGCGCGGGTCACGTGGTCGCACTGGCGGGCACCGCGGCCGCCGTCACCGGCGCTCACCGGTGCCGCGGCCGCCCTGGGCCTCGCGCAGCTCTACCCCTCCTCCCTCGTGCGCGTGCTCGCCGCCGGCGCCGCGCTGCTCGTCTGCTACGTCGCGCTCAGATTCCTGGGCACGAACACGGTGTCGGCGTACCACCGGGCCCGCGTCTACGGCCTGAAGATCCTGACGGAGCCCTTCGCCGACGTCCAGGACTCGGAGCAGGGTCAGCTGTCGACCATCAGCAGGACGGTGACCGTCGAGATCGCGCCGAAGGACGTCCTCGACCAAGCGCTCAAGGGCGAAGCGAAATAG

Protein

MSSYAGPPPIVVFLITEGRDSPVASVSPVRFPSICCDPYGGFTRVFHLRNIRWESPRFLSKSFLAFVTFNLINYSLLAAEVLTTNIADTSAEKRTFYQHIFNGCYAVLLFIVVVFFLIYGVEVFFKLRGEFLKETKVCTIISPRPGTSADGDEAQDTLVTKQGAGGVPQLARPVFRLAEIGVAVWFPCALWNSMAPERLWLLNPRRLLARQLDDAKLADLLAQHHHDAKNVESDSLVDSVGSSRDCWICYDSSRAEPLIRPCRCTGDVSAVHHDCLSRWLVESGVGARVTWSHWRAPRPPSPALTGAAAALGLAQLYPSSLVRVLAAGAALLVCYVALRFLGTNTVSAYHRARVYGLKILTEPFADVQDSEQGQLSTISRTVTVEIAPKDVLDQALKGEAK

Uniprot

A0A3S2NLL7   A0A194QL88   A0A1E1VY05   A0A194QQX4   A0A2J7QQS1   A0A232EQV4   + More
A0A026WJH2   A0A2J7QQT6   A0A195ECR6   F4WYE3   A0A067QZ96   A0A151INS8   E2AXV2   A0A195B0A8   A0A158NXP7   T1P9F6   T1PDL3   A0A151WPN3   B4I2S1   B4Q8M2   Q9VQI2   E1ZYP8   W8B721   A0A0Q9VYT1   A0A195EUR8   A0A0A1XN77   B4NXA0   B3MLA9   A0A3B0JJ67   B4KH11   B4N000   A0A1W4V775   B4GSB9   Q29KF6   B3NA79   B4JCE1   D6WSX5   E2BS63   B4M9H8   E0VII0   A0A1B0GGF9   U5ENJ3   A0A1A9W5K5   N6T2J8   A0A1Y1K655   U4UU81   A0A087ZQA5   A0A2A3EHR1   V9IJG0   A0A0N0BHI5   A0A0C9QZD4   A0A336LTJ9   E9FUJ6   T1HMY7   A0A0A9YKT4   A0A0V0G7S9   A0A224XAM9  

Pubmed

26354079    28648823    24508170    30249741    21719571    24845553    + More
20798317    21347285    25315136    17994087    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24495485    25830018    17550304    18057021    15632085    23185243    18362917    19820115    20566863    23537049    28004739    21292972    25401762    26823975   

EMBL

RSAL01000042    RVE50782.1    KQ459053    KPJ04206.1    GDQN01011454    JAT79600.1    + More
KQ461181    KPJ07749.1    NEVH01012083    PNF30922.1    NNAY01002716    OXU20712.1    KK107168    QOIP01000001    EZA56197.1    RLU26724.1    PNF30927.1    KQ979074    KYN23015.1    GL888440    EGI60795.1    KK853083    KDR11659.1    KQ976914    KYN07095.1    GL443736    EFN61716.1    KQ976692    KYM77725.1    ADTU01003275    ADTU01003276    KA644795    AFP59424.1    KA646225    AFP60854.1    KQ982851    KYQ49862.1    CH480820    EDW54066.1    CM000361    CM002910    EDX03539.1    KMY87764.1    AE014134    BT006012    AAF51189.1    AAO74695.1    GL435242    EFN73588.1    GAMC01013674    GAMC01013672    JAB92883.1    CH940654    KRF77978.1    KQ981958    KYN32005.1    GBXI01013344    GBXI01003451    GBXI01001890    JAD00948.1    JAD10841.1    JAD12402.1    CM000157    EDW87457.1    KRJ97161.1    KRJ97162.1    CH902620    EDV30698.1    KPU72993.1    KPU72994.1    OUUW01000006    SPP82397.1    CH933807    EDW12222.1    KRG03157.1    CH963920    EDW77935.1    CH479189    EDW25666.1    CH379061    EAL33219.1    KRT04816.1    KRT04817.1    CH954177    EDV57542.1    KQS70014.1    KQS70015.1    CH916368    EDW03095.1    KQ971352    EFA06336.1    GL450151    EFN81455.1    EDW57854.1    KRF77977.1    KRF77979.1    DS235200    EEB13186.1    CCAG010011257    GANO01004053    JAB55818.1    APGK01054741    APGK01054742    APGK01054743    APGK01054744    APGK01054745    APGK01054746    APGK01054747    KB741253    ENN71778.1    GEZM01097310    JAV54277.1    KB632372    ERL93751.1    KZ288254    PBC30726.1    JR050389    AEY61263.1    KQ435750    KOX76311.1    GBYB01006077    JAG75844.1    UFQT01000101    SSX19993.1    GL732525    EFX88912.1    ACPB03011978    GBHO01011363    GBRD01003907    GDHC01015330    JAG32241.1    JAG61914.1    JAQ03299.1    GECL01002072    JAP04052.1    GFTR01007031    JAW09395.1   

Proteomes

UP000283053    UP000053268    UP000053240    UP000235965    UP000215335    UP000053097    + More
UP000279307    UP000078492    UP000007755    UP000027135    UP000078542    UP000000311    UP000078540    UP000005205    UP000095301    UP000075809    UP000001292    UP000000304    UP000000803    UP000008792    UP000078541    UP000002282    UP000007801    UP000268350    UP000009192    UP000007798    UP000192221    UP000008744    UP000001819    UP000008711    UP000001070    UP000007266    UP000008237    UP000009046    UP000092444    UP000091820    UP000019118    UP000030742    UP000005203    UP000242457    UP000053105    UP000000305    UP000015103   

PRIDE

Q9VQI2   

Pfam

PF18720   EGF_Tenascin        + More
PF12906   RINGv
PF06454   DUF1084
PF07974   EGF_2

Interpro

IPR013083   Znf_RING/FYVE/PHD        + More
IPR041161   EGF_Tenascin       
IPR011016   Znf_RING-CH       
IPR009457   DUF1084       
IPR013111   EGF_extracell       
IPR008979   Galactose-bd-like_sf       

Gene 3D

3.30.40.10     2.60.120.260    

ProteinModelPortal

A0A3S2NLL7   A0A194QL88   A0A1E1VY05   A0A194QQX4   A0A2J7QQS1   A0A232EQV4   + More
A0A026WJH2   A0A2J7QQT6   A0A195ECR6   F4WYE3   A0A067QZ96   A0A151INS8   E2AXV2   A0A195B0A8   A0A158NXP7   T1P9F6   T1PDL3   A0A151WPN3   B4I2S1   B4Q8M2   Q9VQI2   E1ZYP8   W8B721   A0A0Q9VYT1   A0A195EUR8   A0A0A1XN77   B4NXA0   B3MLA9   A0A3B0JJ67   B4KH11   B4N000   A0A1W4V775   B4GSB9   Q29KF6   B3NA79   B4JCE1   D6WSX5   E2BS63   B4M9H8   E0VII0   A0A1B0GGF9   U5ENJ3   A0A1A9W5K5   N6T2J8   A0A1Y1K655   U4UU81   A0A087ZQA5   A0A2A3EHR1   V9IJG0   A0A0N0BHI5   A0A0C9QZD4   A0A336LTJ9   E9FUJ6   T1HMY7   A0A0A9YKT4   A0A0V0G7S9   A0A224XAM9  

PDB

2D8S     E-value=0.00287592,     Score=96

KEGG

101743572    no KO assigned | (RefSeq) uncharacterized LOC101743572

GO

GO:0016021   GO:0046872   GO:0016874   GO:0008270   GO:0006836   GO:0003824   GO:0016788   GO:0007165   GO:0005525   GO:0008033   GO:0003676   GO:0016787  

Length:

401

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

64.3749200000001

Exp number, first 60 AAs:

0.29568

Total prob of N-in:

0.04800

outside

1  -  63

TMhelix

64  -  86

inside

87  -  98

TMhelix

99  -  121

outside

122  -  320

TMhelix

321  -  343

inside

344  -  401

 

 

Pi

388.99186

Theta

139.294025

Tajima's D

-0.931011

CLR

1.62608

CSRT

0.147142642867857

Interpretation

Uncertain