SGID The Silkworm Genome Information Database
Gene
KWMTBOMO12175
Annotation
PREDICTED:_plasminogen_receptor_(KT)_[Amyelois_transitella]
Location in the cell
Mitochondrial   Reliability : 1.024 Nuclear   Reliability : 1.583
 

Sequence

CDS
ATGGGTAATTTGTTCAGCGTCAGCATGGAAGAAAATTACAAAAGGAACCAAGAATTCTTGCAAACTATAAACAAAGTCAAGATGGAGAGACAAATACAACTACAATATCAAATGCAAGAACGCCAAATGGCCTTGGAAATAGCTAAAAACAGAGACACATGTCTGTGGATTACTGCTTTTTATATAACGACCGCAACGGGATTGTTTACAGGTTTCAGAAGGACGAAAAGACAGTACCTACTGATGCCGCTTGTCCCGTTGACATTCATCACTTTGTACTACTGGGACCTTGCATATGGGAATAAAGTGCATAGGATTCGAATGGAGGCGGAACACGTAATGACGCACGAAGCTGAATCCTTGGAGTGGCCGTGCGGTCTGCCTTCTCCCTCCTCCATCGACCTCGGACGATTCGACGAGGAGGAAAAGAAGAGAATACATCCGCCCCTTCTTCTCTAA
Protein
MGNLFSVSMEENYKRNQEFLQTINKVKMERQIQLQYQMQERQMALEIAKNRDTCLWITAFYITTATGLFTGFRRTKRQYLLMPLVPLTFITLYYWDLAYGNKVHRIRMEAEHVMTHEAESLEWPCGLPSPSSIDLGRFDEEEKKRIHPPLLL

Summary

EMBL
GDQN01005336    JAT85718.1    NWSH01004790    PCG64682.1    ODYU01001261    SOQ37232.1    + More
KZ150433    PZC70886.1    KQ459053    KPJ04198.1    KQ461181    KPJ07739.1    AGBW02009842    OWR49766.1    GAIX01006611    JAA85949.1    JTDY01003732    KOB69078.1    RSAL01000042    RVE50769.1    KK853224    KDR09687.1    KQ971307    EFA10888.2    UFQT01000461    SSX24577.1    CVRI01000043    CRK96358.1    JXUM01047381    KQ561516    KXJ78318.1    CH477223    EAT47220.1    AXCN02000606    AAAB01008964    APCN01005204    AXCM01006351    DS235307    EEB14553.1    NEVH01020852    PNF21168.1    DS231823    EDS26586.1    QCYY01002037    ROT73320.1    JRES01001303    KNC23774.1    GDRN01094818    JAI59660.1    GDRN01094822    GDRN01094821    JAI59658.1    GDRN01094819    JAI59659.1    GL732667    EFX67824.1    GDIQ01020440    JAN74297.1    GU186848    ADQ43240.1    KB203019    ESO86634.1    GBXI01006112    JAD08180.1    GDHF01015091    JAI37223.1    GAKP01000199    JAC58753.1    CAQQ02176559    GAMC01006201    JAC00355.1    RQTK01000454    RUS79388.1    IAAA01051843    LAA11783.1    CH379064    EAL31877.2    CH963851    EDW75401.2    CH933810    EDW06905.1    CP012528    ALC49288.1    CH954180    EDV47108.1    CH902625    EDV35073.1    AE014298    AAF48364.2    IACF01005194    LAB70780.1    RCHS01003481    RMX41501.1    BT022479    AAY54895.1    GGLE01004363    MBY08489.1    CH916370    EDW00556.1    CM000366    EDX17893.1    CAAE01010492    CAF93165.1    GBBL01002220    JAC25100.1    CH480835    EDW48858.1    CH940651    EDW65139.1    CM000162    EDX01668.2    DS469549    EDO44001.1    DS985249    EDV22364.1    LSMT01000793    PFX14356.1    HACG01008626    CEK55491.1    CCAG010006707    JXJN01005871    BT057421    ACM09293.1    FR905559    CDQ80172.1    GEFM01003965    JAP71831.1    JH431789    GU589263    ADO29214.1    CP026258    AWP15139.1    AWP15140.1    AWP15141.1    AWP15142.1    AWP15143.1   
Pfam
PF10166   DUF2368
Interpro
IPR019319   Plg-R(KT)       

Ontologies

Topology

Length:
152
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
38.03611
Exp number, first 60 AAs:
6.95889
Total prob of N-in:
0.15207
outside
1  -  52
TMhelix
53  -  72
inside
73  -  78
TMhelix
79  -  98
outside
99  -  152
 
 

Population Genetic Test Statistics

Pi
308.519758
Theta
175.504746
Tajima's D
2.208435
CLR
0.100384
CSRT
0.911404429778511
Interpretation
Uncertain
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