Gene

KWMTBOMO12167  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014064

Annotation

PREDICTED:_RNA-binding_protein_PNO1_[Papilio_polytes]

Location

Bomo_Chr20(+):8641857-8645019      View in EpiBrowser

Full name

RNA-binding protein pno1       + More
RNA-binding protein PNO1      

Location in the cell

Nuclear   Reliability : 2.866

CDS

ATGGAAACGGAGAACATAAGTGTTGATGATTTTTTGCCAGCTAAAAAGACGATGAAGCTTAAAAATATAAAGCGCAAAGCTACAGATGACACCGGAGATGGTATGGAGGTTGAAGAGCCCACAATTGGGGAAAGCAATCCAAAGAAGCCTAGAAGGAACCGAAAAAAACATAAAAAAAGTTCAGACCCTAATGAGAGTAAAGTTGCAATGCGAAAAGTTGCGGTCCCAGCTCACAGATATACACCACTTAAGGAAAGCTGGCTGAAGATATTTACTCCGATTGTTGAACACTTATTGCTACAAGTAAGGTTTAACACGAAAACGAGGAATGTTGAGATAAAAGTCGGACCAGAAACAAAAGATATTGCAAATTTACAGAAAGCTGCTGATTTTGTAAAGGCTTTCATATATGGTTTTGAAGTTGATGATGCCTTAGCGTTGCTCCGGCTAGATGATTTATTTGTCGAATCGTTCGAGGTTAAAGATGTGAAAACACTAAATGGTGACCATTTAAGTAGAGCTATTGGTCGTTTAGCTGGCAAAGCTGGTCGAACAAAATTCACAATTGAAAATGTAACAAAAACAAGAATAGTACTAGCAGACTCAAAAATTCATATATTGGGCAGTTATCAGAATATTGCTTTGGCAAGACGGGCTATATGTAATTTGATAATGGGATCTCCGCCTTCAAAAGTTTACGGGAATTTGAGAAACGTCGCTAACAGAGTGGCTGAAAGAATATAG

Protein

METENISVDDFLPAKKTMKLKNIKRKATDDTGDGMEVEEPTIGESNPKKPRRNRKKHKKSSDPNESKVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETKDIANLQKAADFVKAFIYGFEVDDALALLRLDDLFVESFEVKDVKTLNGDHLSRAIGRLAGKAGRTKFTIENVTKTRIVLADSKIHILGSYQNIALARRAICNLIMGSPPSKVYGNLRNVANRVAERI

Description

Positively regulates dimethylation of two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 18S rRNA.

Similarity

Belongs to the PNO1 family.

Keywords

Complete proteome   Nucleus   Reference proteome   RNA-binding  

Feature

chain  RNA-binding protein pno1

Uniprot

H9JWZ9   A0A2H1VMP3   A0A2A4J478   A0A2W1BA75   A0A1E1W6D2   A0A194QQF8   + More
I4DJY1   S4PSZ7   A0A212F372   A0A3G1T1E1   A0A212EUV4   A0A0K8TR18   A0A3B0K4T3   Q29IG6   A0A1W4WGE7   A0A1I8P534   A0A0L0BXP6   A0A1Y1NCB3   A0A0M4EUF9   A0A1W4VKZ9   D6WSC6   A0A088AI64   B4M9Z7   B4JKB3   V5GXK0   B3MQG6   B3NWI6   A0A1I8MXI8   A0A0N0U5X8   Q9VR89   A0A1B6FMD2   A0A2P8YTT5   B4PY29   A0A1B6LVB0   A0A154PQM6   A0A1B6I1D9   B4MTF1   A0A232EQU0   K7IW92   A0A310SAL3   A0A0K8UMP0   A0A1B6CEH0   A0A034VYT7   B4R2Y0   B4L7V8   N6SYE5   A0A0A9VVN0   A0A1S3DEA0   A0A3P9MI88   H2LAN5   A0A3P9IWH1   A0A067QPM0   Q6VBQ6   A0A151WQ95   A0A195AZR4   A0A158NXP3   G1K9A2   T1J5Z4   R4WD85   E2BS60   A0A0P5UDD9   A0A3L8E1X0   F4W8X6   A0A2A3EB72   A0A2J7PIU9   G1MZ72   A0A1A9VZ76   A0A023F8C3   A0A3P8UJJ2   A0A069DQX6   A0A195EVS7   A0A0P5EAR8   A0A0P4ZDJ5   E0VPC3   A0A0P5XMC6   A0A3B3CUB2   A0A091KS58   A0A0P6DT24   R4G7Y5   A0A0P6EJD3   A0A0N8CCE4   A0A151MGR3   A0A3Q2ZF56   A0A151IP30   E2A8P7   A0A3Q0GC31   A0A0P6C7L6   A0A224XJF9   A0A0A0AD07   A0A0P5JXK5   U3IP28   A0A091WUB9   A0A2R7VVY2   A0A091LQ74   A0A091RBW6   E9HEH0   A0A093ECI6   A0A3Q1ILC9   A0A1W7RE25  

Pubmed

19121390    28756777    26354079    22651552    23622113    22118469    + More
26369729    15632085    26108605    28004739    18362917    19820115    17994087    25315136    10731132    12537572    12537569    29403074    17550304    28648823    20075255    25348373    23537049    25401762    26823975    17554307    24845553    15497447    21347285    23691247    20798317    30249741    21719571    20838655    25474469    24487278    26334808    20566863    29451363    22293439    21292972    26358130   

EMBL

BABH01041746    ODYU01003385    SOQ42078.1    NWSH01003461    PCG66250.1    KZ150228    + More
PZC72028.1    GDQN01008527    JAT82527.1    KQ461181    KPJ07732.1    AK401599    KQ459053    BAM18221.1    KPJ04190.1    GAIX01012918    JAA79642.1    AGBW02010605    OWR48188.1    MG846943    AXY94795.1    AGBW02012313    OWR45234.1    GDAI01000791    JAI16812.1    OUUW01000003    SPP78478.1    CH379063    JRES01001179    KNC24766.1    GEZM01007149    JAV95339.1    CP012528    ALC49388.1    KQ971352    EFA06621.1    CH940655    EDW66056.2    CH916370    EDW00016.1    GALX01003393    JAB65073.1    CH902621    EDV44592.1    CH954180    EDV46806.1    KQ435750    KOX76308.1    AF188892    AE014298    AY061304    GECZ01028863    GECZ01018411    JAS40906.1    JAS51358.1    PYGN01000365    PSN47652.1    CM000162    EDX03001.1    GEBQ01012364    JAT27613.1    KQ435043    KZC14192.1    GECU01027002    JAS80704.1    CH963851    EDW75390.1    NNAY01002716    OXU20711.1    KQ766333    OAD53701.1    GDHF01024340    JAI27974.1    GEDC01025588    GEDC01005916    JAS11710.1    JAS31382.1    GAKP01011902    GAKP01011897    JAC47055.1    CM000366    EDX18457.1    CH933814    EDW05533.1    APGK01059359    KB741293    ENN70218.1    GBHO01043865    GDHC01010838    JAF99738.1    JAQ07791.1    KK853098    KDR11406.1    AY344059    KQ982851    KYQ49865.1    KQ976692    KYM77728.1    ADTU01003273    JH431869    AK417314    BAN20529.1    GL450151    EFN81452.1    GDIP01131858    JAL71856.1    QOIP01000001    RLU26721.1    GL887974    EGI69335.1    KZ288293    PBC29023.1    NEVH01024955    PNF16266.1    GBBI01001126    JAC17586.1    GBGD01002778    JAC86111.1    KQ981958    KYN32002.1    GDIP01144212    LRGB01002597    JAJ79190.1    KZS06795.1    GDIP01215851    JAJ07551.1    DS235363    EEB15229.1    GDIP01069965    JAM33750.1    KK752152    KFP42130.1    GDIQ01073216    JAN21521.1    ACPB03005679    GAHY01001912    JAA75598.1    GDIQ01061921    JAN32816.1    GDIQ01093507    JAL58219.1    AKHW03006178    KYO23699.1    KQ976914    KYN07098.1    GL437663    EFN70126.1    GDIP01011994    JAM91721.1    GFTR01003801    JAW12625.1    KL871548    KGL92399.1    GDIQ01192101    JAK59624.1    KL411257    KFR05041.1    KK854121    PTY11663.1    KK506761    KFP61653.1    KK698908    KFQ26062.1    GL732629    EFX69880.1    KL241319    KFV12191.1    GDAY02002049    JAV49383.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000268350    + More
UP000001819    UP000192223    UP000095300    UP000037069    UP000092553    UP000192221    UP000007266    UP000005203    UP000008792    UP000001070    UP000007801    UP000008711    UP000095301    UP000053105    UP000000803    UP000245037    UP000002282    UP000076502    UP000007798    UP000215335    UP000002358    UP000000304    UP000009192    UP000019118    UP000079169    UP000265180    UP000001038    UP000265200    UP000027135    UP000075809    UP000078540    UP000005205    UP000001646    UP000008237    UP000279307    UP000007755    UP000242457    UP000235965    UP000001645    UP000091820    UP000265120    UP000078541    UP000076858    UP000009046    UP000261560    UP000015103    UP000050525    UP000264820    UP000078542    UP000000311    UP000189705    UP000053858    UP000053283    UP000000305    UP000265040   

PRIDE

H9JWZ9    Q9VR89   

Pfam

PF17903   KH_8        + More
PF00013   KH_1
PF13820   Nucleic_acid_bd

Interpro

IPR036612   KH_dom_type_1_sf        + More
IPR039912   PNO1-like       
IPR004087   KH_dom       
IPR041174   KH_8       
IPR004088   KH_dom_type_1       
IPR032715   NCOA6_nucleic_acid-bd       

SUPFAM

SSF54791   SSF54791       

Gene 3D

3.30.1370.10    

ProteinModelPortal

H9JWZ9   A0A2H1VMP3   A0A2A4J478   A0A2W1BA75   A0A1E1W6D2   A0A194QQF8   + More
I4DJY1   S4PSZ7   A0A212F372   A0A3G1T1E1   A0A212EUV4   A0A0K8TR18   A0A3B0K4T3   Q29IG6   A0A1W4WGE7   A0A1I8P534   A0A0L0BXP6   A0A1Y1NCB3   A0A0M4EUF9   A0A1W4VKZ9   D6WSC6   A0A088AI64   B4M9Z7   B4JKB3   V5GXK0   B3MQG6   B3NWI6   A0A1I8MXI8   A0A0N0U5X8   Q9VR89   A0A1B6FMD2   A0A2P8YTT5   B4PY29   A0A1B6LVB0   A0A154PQM6   A0A1B6I1D9   B4MTF1   A0A232EQU0   K7IW92   A0A310SAL3   A0A0K8UMP0   A0A1B6CEH0   A0A034VYT7   B4R2Y0   B4L7V8   N6SYE5   A0A0A9VVN0   A0A1S3DEA0   A0A3P9MI88   H2LAN5   A0A3P9IWH1   A0A067QPM0   Q6VBQ6   A0A151WQ95   A0A195AZR4   A0A158NXP3   G1K9A2   T1J5Z4   R4WD85   E2BS60   A0A0P5UDD9   A0A3L8E1X0   F4W8X6   A0A2A3EB72   A0A2J7PIU9   G1MZ72   A0A1A9VZ76   A0A023F8C3   A0A3P8UJJ2   A0A069DQX6   A0A195EVS7   A0A0P5EAR8   A0A0P4ZDJ5   E0VPC3   A0A0P5XMC6   A0A3B3CUB2   A0A091KS58   A0A0P6DT24   R4G7Y5   A0A0P6EJD3   A0A0N8CCE4   A0A151MGR3   A0A3Q2ZF56   A0A151IP30   E2A8P7   A0A3Q0GC31   A0A0P6C7L6   A0A224XJF9   A0A0A0AD07   A0A0P5JXK5   U3IP28   A0A091WUB9   A0A2R7VVY2   A0A091LQ74   A0A091RBW6   E9HEH0   A0A093ECI6   A0A3Q1ILC9   A0A1W7RE25  

PDB

6G5I     E-value=3.55244e-66,     Score=636

KEGG

101745618    K11884 RNA-binding protein PNO1 | (RefSeq) RNA-binding protein pno1

GO

GO:0003723   GO:0005730   GO:0003676   GO:0006750   GO:0016874   GO:0019012   GO:0007165   GO:0005525   GO:0008033   GO:0016787  

PANTHER

PTHR12826:SF13  

Subcellular location

  

Length:

247

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00908

Exp number, first 60 AAs:

0

Total prob of N-in:

0.07694

outside

1  -  247

 

 

Pi

234.345749

Theta

165.464723

Tajima's D

1.403021

CLR

0

CSRT

0.75961201939903

Interpretation

Uncertain