Silkworm Genome Informatics Database

Gene

KWMTBOMO12163

Pre Gene Modal

BGIBMGA002258

Annotation

PREDICTED:_uncharacterized_protein_LOC105841875_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr20(+):8584317-8586033 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.815 Nuclear Reliability : 1.532

CDS

ATGGAAAGTGTAAGTGCAATGGCATCAAGCAAGTCTCTCACAAAGGACGAGACAAAAATACTGCTTTCGTTTATTGAAAGTAGTAAAATTATTTATAATAAAAGAACAAATGCGACTACTAACAAATTGAAAAATGAGGAGTTGAAACGCATAAGAGACCAGTTCAATGCTGTGGTGACCACATCCTACCGGACACCACAGCAGTTGCGTTTAAAATGGGAAAATCTTAAAAAGAATTCCCGTAAACGCAATACACAAATACGTATGAATAACATAAAGACTGGTGGCGGTGGTCCTTCCTACATCCCCCCTGATGATGTGTTGGACAGGGTGGCTGCATTATTAGGAACTACTGTAGATGGGTTCACAGTAGCATATGGTGGTGATGCTGAACTAATACCATGTGTCGGCAGTATTAATGGCAGTGGTGATGAACATGGTTTGGAGGTTGTTGCAGTTATAGATAATGTAATTGATAATGGTGCTGAGGTGTTGGAGTGTAACAGTGGTGTTGAGGTGTTGAAAGAGTGTGTGGTCGAAGACACAGGGCCTTGCTCAGTCACACCACCTAACCCCAAATTTTTACACACTCCCAAAGCCAGCGGGTTTCAAAAGAAAATCAAAATCTGA

Protein

MESVSAMASSKSLTKDETKILLSFIESSKIIYNKRTNATTNKLKNEELKRIRDQFNAVVTTSYRTPQQLRLKWENLKKNSRKRNTQIRMNNIKTGGGGPSYIPPDDVLDRVAALLGTTVDGFTVAYGGDAELIPCVGSINGSGDEHGLEVVAVIDNVIDNGAEVLECNSGVEVLKECVVEDTGPCSVTPPNPKFLHTPKASGFQKKIKI

Uniprot

A0A2A4IVT0 S4PY81 H9J5F6 U4TYE9 A0A2R5LFI9 A0A2A4ISV6 + More
J9JR10 A0A2A4IY09 A0A1Y1K0T4 A0A1Y1K3J7 A0A0L0BU16 A0A3S2PJN2

Pubmed

23622113 19121390 23537049 28004739 26108605

EMBL

NWSH01005652 PCG64077.1 GAIX01003748 JAA88812.1 BABH01028201 KB631844 + More
ERL86664.1 GGLE01004136 MBY08262.1 NWSH01007929 PCG62749.1 ABLF02011808 NWSH01005748 PCG63983.1 GEZM01096181 JAV55079.1 GEZM01096180 JAV55081.1 JRES01001461 KNC22709.1 RSAL01000013 RVE53390.1

Proteomes

UP000218220 UP000005204 UP000030742 UP000007819 UP000037069 UP000283053 + More

PRIDE

H9J5F6

Pfam

PF13873 Myb_DNA-bind_5

Interpro

IPR026753   NAIF1        + More
IPR028002   Myb_DNA-bind_5
IPR017877   Myb-like_dom

ProteinModelPortal

A0A2A4IVT0 S4PY81 H9J5F6 U4TYE9 A0A2R5LFI9 A0A2A4ISV6 + More
J9JR10 A0A2A4IY09 A0A1Y1K0T4 A0A1Y1K3J7 A0A0L0BU16 A0A3S2PJN2

KEGG

105841875 no KO assigned | (RefSeq) uncharacterized LOC105841875

GO

GO:0005634 GO:0006915

PANTHER

PTHR23098

Length:

209

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00395

Exp number, first 60 AAs:

0.00033

Total prob of N-in:

0.08153

outside

1 - 209

Pi

143.482452

Theta

185.427329

Tajima's D

-0.661737

CLR

125.591965

CSRT

0.203189840507975

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree