Gene

KWMTBOMO12158

Annotation

PREDICTED:_putative_nuclease_HARBI1_[Papilio_machaon]

Location

Bomo_Chr20(+):8515217-8517220      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.207

CDS

ATGCAAAGACCACCGTTGTACGAGCGTAGTCCCTTATATTATTTTGTTGCTGCAAGTTTACTTGAAAATGAAGAATATTCATCAAGAGAAGTTAGAGAAATTACACGCAGAGTTGCTCTGAGAAAGAAAAATAATCCTGTGGACATAAATGACGCGGAATTCAAAAATAGATACCGGTTGAATAAAGAATCATTCAAGTTTCTTTGTAATCAACTTAAGCAAAAAACATCTTTAAAAGCAAGTTCCAGGATAAGTTTGGAACTTAAGGTTCTTTGCGCGCTATCTTTTTATGCCACTGGATCTTACCAACGCTTAGTGGGAATGGCTAAATATTTGGGCCAAACGACTGTTAGCAAATGTGTGAAGGAAGTAACAGATGCTCTTGTAACTCCTGCAATCTTAAATACTTTCATAAAATTTCCTTATGCCAGAGCTGATAGAGATGTAATAAGAAACAAATTTTTTGTAAAGTATGGTTTCCCAGGAGTTATAGGATGCATTGATGGATGTCATTTCCATATTTTCACACCCAAAAAAGAAGTCGAACATTTATATTATAGTAGAAAGCATTTCCATTCATTAAATGTGCAAATGATTTGTGATAGTGATTGTCGTATTTTAAACGTAAATGCGAAATACGGAGGAGCCACCCACGACGCTTTTATTTGGGAAAATAGCGTGGTCAACAATTATATGCAGAGCTTACATCGAAATAACGAGCAAGTGTGGTTGTTAGGTGATTCTGGTTATCCACAGCGACCCTGGTTAATGACACCAATTTTAGATGCTGTTGAGGGAACTCCAGCTTATAAATATACAGCAGTTCATGGAAGGACCAGAGTAGCTATTGAAAATACTTTTGGGCGACTAAAAAACCGATGGCGTTGTTTGTGTAAGGATCGCACATTACACTATGCTCCAGTAAAATGTGCAAAAATCATAACAGCATGCTGTGTATTGCACAACTTAGCCATTGAGTTCAACGTACCTGAACCAGAACCAGCAGAGATTGAAAACCCCAATTTGGCTATGACAATATCTGAACATATTTTTCAAGAGAATACTACAGGAGATGGGTTAATTAGGGGTAGAGCTATAAGAAGTATTTTAGCGGATAAAATTAATAGACTTCATACATAA

Protein

MQRPPLYERSPLYYFVAASLLENEEYSSREVREITRRVALRKKNNPVDINDAEFKNRYRLNKESFKFLCNQLKQKTSLKASSRISLELKVLCALSFYATGSYQRLVGMAKYLGQTTVSKCVKEVTDALVTPAILNTFIKFPYARADRDVIRNKFFVKYGFPGVIGCIDGCHFHIFTPKKEVEHLYYSRKHFHSLNVQMICDSDCRILNVNAKYGGATHDAFIWENSVVNNYMQSLHRNNEQVWLLGDSGYPQRPWLMTPILDAVEGTPAYKYTAVHGRTRVAIENTFGRLKNRWRCLCKDRTLHYAPVKCAKIITACCVLHNLAIEFNVPEPEPAEIENPNLAMTISEHIFQENTTGDGLIRGRAIRSILADKINRLHT

Uniprot

A0A2H1WF99   A0A0N1PGD3   A0A2H1WD44   A0A2A4JLB2   A0A0L7KN87   A0A0L7K4M1   + More
A0A3S2KXR4   A0A3S2NYQ0   A0A2H1WHW7   A0A1Y1LCA2   A0A2A4JE29   A0A151X7N1   A0A3S2TBQ6   A0A3S2LIG1   A0A3S2NUT6   A0A3S2P0U8   J9LBU4   A0A1Y1LBS4   X1WUF6   J9LT00   A0A3L8D7N5   J9KMC8   J9JJQ0   X1XEM7   A0A2S2PSI0   J9JZE9   J9L396   J9LBK2   A0A1W7R877   A0A2S2PIH9   A0A293LP83   A0A1Y1LMV8   J9LA94   J9KIX5   A0A2S2P7Q5   A0A1I8N5U5   A0A0L7L3J7   A0A1Y1MFZ5   A0A3S2L5C3   A0A1Y1MD94   A0A2H1VYJ2   A0A1Y1MEV3   H9JCB9   X1WYT4   A0A1Y1MI13   A0A1I8QE63   J9LJG2   X1WTQ2   A0A224YXX7   A0A194QFZ9   A0A0N0PBM2   A0A1Y1MLY4   A0A0L7L6Q9   A0A1L8DIS7   A0A1E1XIT9   J9JUD5   A0A3S2N716   J9K3Q5   A0A023G5D7   A0A212FI90   A0A034WU69   A0A151IJL6   J9LXK1   J9M0A3   A0A1I8P0P4   J9JZV0   A0A1Y1MLZ3   A0A139WDR7   A0A1E1XIG4   A0A1S3IHJ1   A0A1I8PNG1   A0A1I8P0U1   A0A147BKH0   A0A1B0DLQ6   A0A3S2PE65   A0A1I8P0T4  

Pubmed

26354079    26227816    28004739    30249741    25315136    19121390    + More
28797301    28503490    22118469    25348373    18362917    19820115    29652888   

EMBL

ODYU01008289    SOQ51743.1    KQ460748    KPJ12585.1    ODYU01007850    SOQ50983.1    + More
NWSH01001073    PCG72761.1    JTDY01008402    KOB64585.1    JTDY01010953    KOB57850.1    RSAL01001114    RVE40940.1    RSAL01000093    RVE47951.1    ODYU01008771    SOQ52663.1    GEZM01060077    GEZM01060076    JAV71299.1    NWSH01001816    PCG70036.1    KQ982441    KYQ56385.1    RSAL01000648    RVE41269.1    RSAL01000104    RVE47351.1    RSAL01000173    RVE45093.1    RSAL01000007    RVE54128.1    ABLF02031817    GEZM01060292    JAV71119.1    ABLF02041501    ABLF02013558    QOIP01000011    RLU16480.1    ABLF02009520    ABLF02023210    ABLF02041985    GGMR01019801    MBY32420.1    ABLF02007995    ABLF02008467    ABLF02002012    ABLF02004302    ABLF02059604    GEHC01000287    JAV47358.1    GGMR01016077    MBY28696.1    GFWV01005584    MAA30314.1    GEZM01054395    GEZM01054394    GEZM01054393    GEZM01054392    GEZM01054391    GEZM01054390    GEZM01054389    GEZM01054388    JAV73690.1    ABLF02019810    ABLF02008047    GGMR01012816    MBY25435.1    JTDY01003191    KOB69990.1    GEZM01034904    JAV83560.1    RSAL01000139    RVE46114.1    GEZM01034907    JAV83551.1    ODYU01005228    SOQ45883.1    GEZM01034913    JAV83538.1    BABH01031580    BABH01031581    ABLF02008699    GEZM01034909    JAV83546.1    ABLF02016385    ABLF02016544    GFPF01010629    MAA21775.1    KQ458981    KPJ04473.1    KQ460882    KPJ11475.1    GEZM01030206    GEZM01030205    GEZM01030202    GEZM01030200    GEZM01030198    GEZM01030190    GEZM01030187    JAV85700.1    JTDY01002614    KOB71085.1    GFDF01007731    JAV06353.1    GFAC01000064    JAT99124.1    ABLF02015400    RSAL01005142    RVE40041.1    ABLF02009691    GBBM01006404    JAC29014.1    AGBW02008415    OWR53452.1    GAKP01001624    JAC57328.1    KQ977331    KYN03448.1    ABLF02022814    ABLF02007989    ABLF02057071    GEZM01030208    GEZM01030207    GEZM01030201    GEZM01030199    GEZM01030197    GEZM01030195    GEZM01030194    GEZM01030192    GEZM01030188    GEZM01030186    GEZM01030185    GEZM01030184    GEZM01030183    GEZM01030181    JAV85710.1    KQ971357    KYB26054.1    GFAC01000051    JAT99137.1    GEGO01004180    JAR91224.1    AJVK01016518    RSAL01000077    RVE48763.1   

Proteomes

UP000053240    UP000218220    UP000037510    UP000283053    UP000075809    UP000007819    + More
UP000279307    UP000095301    UP000005204    UP000095300    UP000053268    UP000007151    UP000078542    UP000007266    UP000085678    UP000092462   

PRIDE

H9JCB9   

Pfam

PF13359   DDE_Tnp_4

Interpro

IPR027806   HARBI1_dom        + More
IPR026103   HARBI1_animal       

ProteinModelPortal

A0A2H1WF99   A0A0N1PGD3   A0A2H1WD44   A0A2A4JLB2   A0A0L7KN87   A0A0L7K4M1   + More
A0A3S2KXR4   A0A3S2NYQ0   A0A2H1WHW7   A0A1Y1LCA2   A0A2A4JE29   A0A151X7N1   A0A3S2TBQ6   A0A3S2LIG1   A0A3S2NUT6   A0A3S2P0U8   J9LBU4   A0A1Y1LBS4   X1WUF6   J9LT00   A0A3L8D7N5   J9KMC8   J9JJQ0   X1XEM7   A0A2S2PSI0   J9JZE9   J9L396   J9LBK2   A0A1W7R877   A0A2S2PIH9   A0A293LP83   A0A1Y1LMV8   J9LA94   J9KIX5   A0A2S2P7Q5   A0A1I8N5U5   A0A0L7L3J7   A0A1Y1MFZ5   A0A3S2L5C3   A0A1Y1MD94   A0A2H1VYJ2   A0A1Y1MEV3   H9JCB9   X1WYT4   A0A1Y1MI13   A0A1I8QE63   J9LJG2   X1WTQ2   A0A224YXX7   A0A194QFZ9   A0A0N0PBM2   A0A1Y1MLY4   A0A0L7L6Q9   A0A1L8DIS7   A0A1E1XIT9   J9JUD5   A0A3S2N716   J9K3Q5   A0A023G5D7   A0A212FI90   A0A034WU69   A0A151IJL6   J9LXK1   J9M0A3   A0A1I8P0P4   J9JZV0   A0A1Y1MLZ3   A0A139WDR7   A0A1E1XIG4   A0A1S3IHJ1   A0A1I8PNG1   A0A1I8P0U1   A0A147BKH0   A0A1B0DLQ6   A0A3S2PE65   A0A1I8P0T4  

KEGG

105842992    K23222 nuclease HARBI1 [EC:3.1.-.-] | (RefSeq) putative nuclease HARBI1

GO

GO:0016021  

Length:

379

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.40789

Exp number, first 60 AAs:

0.00092

Total prob of N-in:

0.07007

outside

1  -  379

 

 

Pi

164.236074

Theta

81.713161

Tajima's D

2.250645

CLR

0

CSRT

0.916554172291385

Interpretation

Uncertain