Silkworm Genome Informatics Database

Gene

KWMTBOMO12152

Pre Gene Modal

BGIBMGA004258

Annotation

PREDICTED:_uncharacterized_protein_LOC105842884_[Bombyx_mori]

Location

Bomo_Chr20(-):8421428-8422836 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.399

CDS

ATGAAGGCGTACGAAGAAGTGAAATCCCTAATCAACCAACAACATCAGAAGTTGTTAGCTAGAGCAGGCAACCAGGTAACGAACGAACAATCAAAAACTTCCGATGATGAGCCGAGACCCGAGAATATCAGCGTAGAAGCAGAATCTAGTAGTCCTAGACTGCAAGTGAAGACCACTGGTACAAATAGTAAAATAGACGATTTATTGAGGTGCCAATACGCGAATTTTAAGGCGTTTTTGCGACCCACATCAAACATCCACGTGGAAGCTATTACGGAAAAATGGGAATTTAAAGATGCATTAAAGACTTTGCAATCAAGATGGATAGCAATAGATTCTTTGCATTGGGAAATTGAGACCGAGTTGTGTGGAGATAATGAAACATACAGTATGATGTTTGACAGATATGAAAAACAATTTTATAACTTAAAGAAAGCAATCAACACAGAAAAGAAAGAAATGGCTACCACATCTACATCAATGACTCATGCTGACATTCCGATGGATGTGGAACAAGTAGATAAGTTAAAGGAGAGGAATAAAGAAATTGAAAAATTACTGAAAATTGTTGATATAATAATAAGATTAACAGAAGTAAGTAACTCCGCATCCGTTGGTAAAATTTAA

Protein

MKAYEEVKSLINQQHQKLLARAGNQVTNEQSKTSDDEPRPENISVEAESSSPRLQVKTTGTNSKIDDLLRCQYANFKAFLRPTSNIHVEAITEKWEFKDALKTLQSRWIAIDSLHWEIETELCGDNETYSMMFDRYEKQFYNLKKAINTEKKEMATTSTSMTHADIPMDVEQVDKLKERNKEIEKLLKIVDIIIRLTEVSNSASVGKI

Uniprot

H9J419 A0A2W1BLE3 A0A2H1VXK6 A0A2W1BJC9 A0A2H1X238 A0A2A4JPV9 + More
A0A0L7K300 A0A0L7LEF0 A0A0L7KJM0 A0A0L7L8M8 A0A0L7K2Y9 A0A0L7LGK2

Pubmed

19121390 28756777 26227816

EMBL

BABH01041077 BABH01041078 BABH01041079 BABH01041080 KZ149978 PZC75869.1 + More
ODYU01005059 SOQ45565.1 KZ150008 PZC75149.1 ODYU01012875 SOQ59395.1 NWSH01000803 PCG74105.1 JTDY01017717 KOB51837.1 JTDY01001478 KOB73775.1 JTDY01009666 KOB63104.1 JTDY01002318 KOB71669.1 JTDY01018508 KOB51817.1 JTDY01001277 KOB74321.1

Proteomes

UP000005204 UP000218220 UP000037510

PRIDE

H9J419

Pfam

PF03184   DDE_1        + More
PF07727   RVT_2
PF03564   DUF1759
PF18701   DUF5641
PF05380   Peptidase_A17
PF12259   Baculo_F
PF05585   DUF1758
PF00078   RVT_1

Interpro

IPR004875   DDE_SF_endonuclease_dom        + More
IPR013103   RVT_2
IPR005312   DUF1759
IPR022048   Envelope_fusion-like
IPR008737   Peptidase_asp_put
IPR040676   DUF5641
IPR008042   Retrotrans_Pao
IPR021109   Peptidase_aspartic_dom_sf
IPR000477   RT_dom
IPR001995   Peptidase_A2_cat

Gene 3D

2.40.70.10

ProteinModelPortal

H9J419 A0A2W1BLE3 A0A2H1VXK6 A0A2W1BJC9 A0A2H1X238 A0A2A4JPV9 + More
A0A0L7K300 A0A0L7LEF0 A0A0L7KJM0 A0A0L7L8M8 A0A0L7K2Y9 A0A0L7LGK2

KEGG

105842884 no KO assigned | (RefSeq) uncharacterized LOC105842884

GO

GO:0003676 GO:0000943 GO:0016021 GO:0004190

Length:

208

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0002

Exp number, first 60 AAs:

0

Total prob of N-in:

0.11064

outside

1 - 208

Pi

176.496168

Theta

186.455223

Tajima's D

-0.334151

CLR

30.704171

CSRT

0.276586170691465

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics