SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12134
Annotation
PREDICTED:_uncharacterized_protein_LOC105841793_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.612 Nuclear   Reliability : 1.658
 

Sequence

CDS
ATGACTTGGCACTCGGCTGATCAGCCCCGGGACATTCACCCTTTGTCATGTGAAAATTCACGTGACCCCATAAGTTGCGCTTCTATAAACTTGTTGCGCGAAGATGAAGGCAAATTCTTATCGGAGTCGGAAAAGGTGCGTCTGGTGGATTTACTAGGTGAATATTCCGATGTTTTCGAGGAAATCGGGGTTTCTAATACCACCATAAGACGAATTGTTGCTGAAGGCAGATCTAACAGAGGCGTATTTAGTACGCCCGGTAAAAAGAGGAAAGGTGGCAATGAAAAAAAAAACTTGGATAGTTTTGATTTAGAATTGATCACAATCAAGATAAATGAGTTTTACACTGTACGAAAAGAAATACCCACTGCCATGAAATTGCTACAAATTCTTCGGGAGAAAATCAATTTCAATGGAGGAAGAGAATCATTAAGATTTATTTTGAAAGATATCTGA
Protein
MTWHSADQPRDIHPLSCENSRDPISCASINLLREDEGKFLSESEKVRLVDLLGEYSDVFEEIGVSNTTIRRIVAEGRSNRGVFSTPGKKRKGGNEKKNLDSFDLELITIKINEFYTVRKEIPTAMKLLQILREKINFNGGRESLRFILKDI

Summary

Pfam
PF13358   DDE_3        + More
PF02709   Glyco_transf_7C
PF13733   Glyco_transf_7N
PF07707   BACK
Interpro
IPR038717   Tc1-like_DDE_dom        + More
IPR003859   Galactosyl_T       
IPR029044   Nucleotide-diphossugar_trans       
IPR027995   Galactosyl_T_N       
IPR027791   Galactosyl_T_C       
IPR011705   BACK       
SUPFAM
SSF53448   SSF53448       
Gene 3D

Ontologies

Topology

Length:
151
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00019
Exp number, first 60 AAs:
0
Total prob of N-in:
0.30033
outside
1  -  151
 
 

Population Genetic Test Statistics

Pi
230.437529
Theta
197.787099
Tajima's D
0.049868
CLR
0.270965
CSRT
0.384580770961452
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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