SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12125  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004241
Annotation
putative_importin_[Danaus_plexippus]
Location in the cell
Cytoplasmic   Reliability : 1.69
 

Sequence

CDS
ATGGATGTAACCGAAGAAAATTTGGCAACTCTAGCAAACTACTTACAGCAAACATTGAATCCAGATCAGAACATCAGAAGACCCGCTGAGAAATTTTTAGAGAGTGTAGAAGTCAACCAGAACTATGCCATACTATTGTTGCATCTCATTGACAAGAACAACTATGATAATACAATTAGAGTGGCAGCAGCAATTGTGTTTAAAAACTATATTAAACGGAATTGGCCTATTGAAGAAGACGGCGTGGATCGCATTCATATGGCAGACAGAGTCTCTATCAAGAATCTCATAGTGAACTTGATGCTTAAATCACCAGAAGCAATACAGAAACAATTTAGTGATGCCGTTTCCATAATCGGAAAATATGATTTTCCTGAGAAGTGGCCAACACTTATACCAGAAATGGTGGAAAAATTTGCTACAGGCGACTTCCATGTGATTAATGGTATACTACGGACAGCTCATTCATTATTCAAGAGGTACAGATACGAATTTAAATCTCAAAAACTATGGGAGGAAATCAAACATGTCCTTGAGAATTTTGCAAGACCCCTCACAGATCTCTTTGTTGCTACGATAGAACTAACTCAGAAGCATGCATCGGACGTCCAGGCCCTGCGTGTAATCTATGGGTCCCTCGTCCTCATCTGCAAAGTGTTCTATTCACTTAACTACCAGGATCTGCCGGAGTTCTTTGAAGACAACATGCCCATTTGGATGCCAAATCTGCTGAGACTACTGCAAGTGGATGTTCCGAATGTTGATGATGGAGACGACGACAACCCTGGACTAATGGAGAGACTCCGCACGGAGATATGCGAATGCGTTTCGTTATACGCACTGAAGTACGAGGAGGAGTTTTTGCCTTATTCAAGCGGCTTCGTGACGGCTGTGTGGAACATACTCCTCGCCACAACGCAGAAAGCTAAATACGATATGGTAACTATGTATTATTAA
Protein
MDVTEENLATLANYLQQTLNPDQNIRRPAEKFLESVEVNQNYAILLLHLIDKNNYDNTIRVAAAIVFKNYIKRNWPIEEDGVDRIHMADRVSIKNLIVNLMLKSPEAIQKQFSDAVSIIGKYDFPEKWPTLIPEMVEKFATGDFHVINGILRTAHSLFKRYRYEFKSQKLWEEIKHVLENFARPLTDLFVATIELTQKHASDVQALRVIYGSLVLICKVFYSLNYQDLPEFFEDNMPIWMPNLLRLLQVDVPNVDDGDDDNPGLMERLRTEICECVSLYALKYEEEFLPYSSGFVTAVWNILLATTQKAKYDMVTMYY

Summary

EMBL
BABH01040156    BABH01040157    BABH01040158    BABH01040159    BABH01040160    NWSH01000004    + More
PCG81010.1    AGBW02010240    OWR48872.1    KQ459053    KPJ04187.1    KZ150239    PZC71937.1    PYGN01001737    PSN33093.1    GL436457    EFN71933.1    GL762838    EFZ20732.1    KQ977294    KYN03892.1    KK852686    KDR18464.1    ADTU01018869    KQ976692    KYM77882.1    KQ981693    KYN37793.1    GL451563    EFN79025.1    KQ979182    KYN22319.1    KQ982805    KYQ50487.1    QOIP01000013    RLU15268.1    GEZM01087742    GEZM01087741    JAV58514.1    KQ971352    EFA07339.1    GL888406    EGI61471.1    GFJQ02007981    JAV98988.1    KB632188    ERL89802.1    APGK01045816    KB741039    ENN74537.1    KZ288311    PBC28487.1    GACK01003231    JAA61803.1    GBBM01003540    JAC31878.1    GEFM01002746    JAP73050.1    KY285054    ATP16157.1    GEGO01001795    JAR93609.1    NEVH01003506    PNF40477.1    NNAY01001630    OXU23377.1    AJVK01009334    AJVK01009335    AJVK01009336    PNF40478.1    GFDF01007018    JAV07066.1    GGLE01006654    MBY10780.1    GFPF01007718    MAA18864.1    AJWK01025448    GEDV01002358    JAP86199.1    GEDC01022433    JAS14865.1    KQ761976    OAD56402.1    GEFH01001899    JAP66682.1    GBXI01007135    GBXI01005322    JAD07157.1    JAD08970.1    KK107249    EZA54460.1    KA646122    AFP60751.1    GBYB01001470    JAG71237.1    ACPB03005913    ACPB03005914    JRES01001418    KNC23108.1    GAKP01009554    JAC49398.1    AXCN02001080    GDHF01019545    JAI32769.1    GFWV01022843    MAA47570.1    GDIQ01201645    JAK50080.1    GDIP01113827    JAL89887.1    GDIQ01138366    JAL13360.1    GFAC01002943    JAT96245.1    AXCM01007239    ATLV01024618    KE525353    KFB51792.1    AAAB01008848    EAA07074.1    APCN01003537    GDIQ01135820    JAL15906.1    GBGD01000349    JAC88540.1    ODYU01003688    SOQ42763.1    CCAG010003515    GFDL01013936    JAV21109.1    GDIP01066578    JAM37137.1    GBBI01000365    JAC18347.1    GFTR01008356    JAW08070.1    JXUM01108986    KQ565280    KXJ71133.1    GECZ01010007    JAS59762.1    GDKW01001181    JAI55414.1    GAMC01010569    JAB95986.1    NEDP02004514    OWF45371.1    GL733109    EFX63333.1    CH963913    EDW77319.1    GDIP01233710    JAI89691.1    CH933807    EDW11509.1    CH916372    EDV99302.1    GDIP01038690    JAM65025.1    CH954179    EDV56667.1    GDIP01118334    JAL85380.1    CH480822    EDW55514.1    CM000361    CM002910    EDX05269.1    KMY90614.1   
Pfam
PF08506   Cse1        + More
PF03378   CAS_CSE1
PF03810   IBN_N
PF05878   Phyto_Pns9_10
Interpro
IPR011989   ARM-like        + More
IPR013713   XPO2_central       
IPR005043   XPO2_C       
IPR016024   ARM-type_fold       
IPR001494   Importin-beta_N       
IPR008776   Phyto_Pns9_10       
SUPFAM
SSF48371   SSF48371       
Gene 3D
PDB
1Z3H     E-value=1.07655e-42,     Score=435

Ontologies

Topology

Subcellular location
Nucleus  
Length:
318
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
12.13617
Exp number, first 60 AAs:
0.00222
Total prob of N-in:
0.25323
outside
1  -  318
 
 

Population Genetic Test Statistics

Pi
227.654904
Theta
184.366618
Tajima's D
0.744335
CLR
0.259474
CSRT
0.585370731463427
Interpretation
Uncertain
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