Gene
KWMTBOMO12117
Pre Gene Modal
BGIBMGA004245
Annotation
PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_25-like_isoform_X4_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.429
Sequence
CDS
ATGGTGGCTAACGCACCGGAAACTCCTGTACAAGCGGAGATAGTGTTTGTGATTGAGGCGACCGCTGTTAACGGTGCCTTCATAAACGAACTAAAAGTAAATTATCTTATACCCACATTAGAATATTTCCATGGCGGTGCTCTCGAAGAAGGCAGTGGTACTGGCTCTGTATATGCAATAGTTACATACAAGGCTGCAGACTGCCACCCTGGAGTACCAGTATCAGTTTATGGACCCTTCAACAATCCTCAGAATGTAGTTGAAGCTGTTGATAAAATACAATTCATTGGGGGACATGCGGAGAGCAGAGCTTGTATCACTGAAGCCCTAACAACAGCCTTGACATGTTTCGATGAGTTTGGTCGTATTGATGCACCGATGTATGCTGTCTTAATGTGCTGCTCCCCACCTTACTCTGCCTACGCCGGAGGAATAGTTCCACCAGGAGTACCTGCCACTATAGAACAAGCGGCCAGGATGCTGAGCGAACGAGGAGTTCAGCTATCGATAACGAGCGCCCGGCGCATCGCTGCTCTGAACTCCTTGTACGAGAACGCCGGCGGGGAACTATTGCAAGCGCAACAGAGGAATTATGCCAAGGATCCAAAACATCAAGTGTTGCTTCGTGGGTACAGCCTGAAGGAACGCCCCCCAAGCCCCGCGCCTCCCCCCGTACCTGACATACAGACTGACGTTTATGGACAAGGGCGCGGCGCGACCGCGGTCCCGCGCGGGGGCACGACGCCCCCGTTTCCGCGGAGCGGGCAGGGGATCCCGCGGCTAGGCTGGATGCCGGCCCGCCCGCATGCGCTGTACTGCAACAACTCTGCGCTCCTGACGCAGCTGGCCCAGCCCTCCTATCCGCCGCCTCCACCCGCACACGCCACACAGAGGATGCCGGGCATGATGGCGGCGACTCCTTCGACCAGCAACACGCAGCAACCCCAGCTGCAGAGGAGCTACATCTGGAGCGGCGTCATCGAGCTCATGGAGAAGGGTAAGGCGCCGGGAGATCAGCAGAAGACAACCAAACTTCTACCTTGTCAAGTATCGACAACTTCAAAAGACATAGAACCCGAATTGAAAGCGGACACGTGGCCGAGTAAGCTCTTAATGCAGTTGATGCCGAAGCAATTGATCAGCAACATCGGAGGACAGTATCTCAAGGACAGCAAGTCAGTACTGTTCCACCTTCAGCCGAGCGAAGCCCTCGACCATTTAACCAACGTTATGGTCAACGGGTATGCTGGCTGCGTACACTTCAATCCAATATCGTCGCCGCCTCAATGTGACATAAAAGTGCTAATGTTATTGTACACGCCCGACAAAAAGGCTTATTTGGGATTCATTCCTAATAACCAAGTCGCGTTCGTCGACAGACTTAGAAGTGTCATCCAACAGCAGAAGATAACGCAGCAGATAATCAACAAGCAGCATCCGGCGACGGTCAGCGCGGCCGCCGGACCGCCGCCCAGCATGCCAGTTGCAGGTCAGATGTCGACTGCGGGCATGTCCTCGTCCGGGATGGGAGCGATGGGCAGCGTGCCGGCGCTGGGCCCCGCCAACAGCACCATAGTGTCGCAGCAGATGCAACAACACGCACAGGGTATGATGATGGGCGGCGGGATGTCGGGCGGCGTTGTCGGCGGCAAGGGCCCGCGCTCCGTGACGCAGCTGGACGGGCTGGAGGCGGCCCGCCAACAGAACCTGGAGAAGATACAGCAGCTCCAGGAGACCTTGCAGGCCGCGCACCAGCAGGAGGCCCAGTTCAAGTCGCAGATGGACATCATGTCGCACCTGCACGCCGCCCAGCAACAAGAGCAGCACTATAAACAGCTAGAAGAACAACAGCGCAAGCATCAACTACAGCAGCAGTTGCAGCAACAGTTGCGCGCGGCCGGCGCTCACCCGACGCGCATACTGCGGCCCATGCTGCCCACCAACCCGGGCCTCAAGCATCTGCTGCAGCAGCAACAGCAGCACCGTGGGCCGAGACCTCACGCGTGA
Protein
MVANAPETPVQAEIVFVIEATAVNGAFINELKVNYLIPTLEYFHGGALEEGSGTGSVYAIVTYKAADCHPGVPVSVYGPFNNPQNVVEAVDKIQFIGGHAESRACITEALTTALTCFDEFGRIDAPMYAVLMCCSPPYSAYAGGIVPPGVPATIEQAARMLSERGVQLSITSARRIAALNSLYENAGGELLQAQQRNYAKDPKHQVLLRGYSLKERPPSPAPPPVPDIQTDVYGQGRGATAVPRGGTTPPFPRSGQGIPRLGWMPARPHALYCNNSALLTQLAQPSYPPPPPAHATQRMPGMMAATPSTSNTQQPQLQRSYIWSGVIELMEKGKAPGDQQKTTKLLPCQVSTTSKDIEPELKADTWPSKLLMQLMPKQLISNIGGQYLKDSKSVLFHLQPSEALDHLTNVMVNGYAGCVHFNPISSPPQCDIKVLMLLYTPDKKAYLGFIPNNQVAFVDRLRSVIQQQKITQQIINKQHPATVSAAAGPPPSMPVAGQMSTAGMSSSGMGAMGSVPALGPANSTIVSQQMQQHAQGMMMGGGMSGGVVGGKGPRSVTQLDGLEAARQQNLEKIQQLQETLQAAHQQEAQFKSQMDIMSHLHAAQQQEQHYKQLEEQQRKHQLQQQLQQQLRAAGAHPTRILRPMLPTNPGLKHLLQQQQQHRGPRPHA
Summary
Uniprot
Pubmed
EMBL
Proteomes
Interpro
SUPFAM
SSF53300
SSF53300
Gene 3D
ProteinModelPortal
PDB
2XNF
E-value=1.60232e-24,
Score=282
Ontologies
GO
Topology
Length:
668
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.1528
Exp number, first 60 AAs:
0.08574
Total prob of N-in:
0.00564
outside
1 - 668
Population Genetic Test Statistics
Pi
189.805684
Theta
150.341649
Tajima's D
0.906366
CLR
0.378864
CSRT
0.635818209089546
Interpretation
Uncertain
