Gene

KWMTBOMO12113

Pre Gene Modal

BGIBMGA004348

Annotation

PREDICTED:_UPF0183_protein_CG7083_[Bombyx_mori]

Location

Bomo_Chr20(-):7768448-7792576      View in EpiBrowser

Full name

UPF0183 protein CG7083       + More
DNA primase      

Location in the cell

Extracellular   Reliability : 1.069 Nuclear   Reliability : 1.618 PlasmaMembrane   Reliability : 1.17

CDS

ATGCTGGACCTGGAGATCATCCCGGAGCGGTCACTCGGCTGTGATTCATGGGAATTCGTATTAGGCATGCATTTCTCACAGTCAGTTGCCATCATACAGAGTCAAGTCGGGACAATAAGAGGAGTACAAGTATTGTATAGCGATCAGAATCCTCTATCGGTAGATTTAGTGATCAACATGCCACAGGACGGCATGCGGTTGATATTCGACCCTGTAGCGCAGAGGCTTAAGATTATTGAAATATACAATATGAAATTAGTCAAATTAAGATATAGTGGAATGTGTTTCAATAGTCCTGAAATAACGCCATCTATCGAGCAAGTCGAGCACTGTTTCGGCGCGACCCACCCCGGCTTGTATGACTCGCAGCGCCATCTGTTCGCTTTAAACTTCCGGGGACTCTCTTTTTATTTCCCCGTTGACAGTAAATTCGAACCGGGATACGCGCACGGGCTTGGCTCTTTACAGTTCCCGAATGGCGGTTCCCCGGTTGTTTCGAGAACCACAATATATTACGGATCTCAACATCAGCTAAGCAGTAACACGAGCAGTCGCGTCTCCGGCGTGCCGCTGCCGGACCTGCCGCTGTCCTGTTACAGACAGCAGCTGCACCTGAGGAGGTGCGACGTCCTCCGCAACACCACCAGCACCATGGGTCTGAGGCTGCACATGTTCACTGAAGGCACGAGCAGGGCGCTGGAGCCTTCGCAGGTGGCGCTGGTCCGCGTGGTGCGGTTCGGGGACAGCTGCCAGGGCGTGGCGCGCGCGCTGGGCGCCCCGGCGCGGCTCTACTACAAGGCGGACGACAAGATGCGCATCCACCGCCCCACCGCGCGGAGACGCCCTCCCCCCGCCTCCGACTACCTCTTCAACTACTTCACGCTGGGCCTGGACGTGTTGTTCGACGCTCGCACCAACCAGGTGAAGAAGTTCGTCCTGCACACGAACTACCCGGGCCATTACAACTTCAATATGTACCATCGCTGCGAGTTCGAGCTCACCGTCCAGCCTGATAAATCCGAGGCGCACTCGCTTGTGGAGAGCGGGGGCGGGGTTGCGGTGACCGCCTACAGCAAGTGGGAGGTGGTGTCGCGCGCGCTGCGGGTGTGCGAGCGCCCCGTCGTGCTCAACCGGGCCTCCTCCACCAACACCACCAACCCGTTCGGCTCCACGTTCTGCTATGGATACCAGGATATCATTTTTGAAGTGATGTCAAACAACTACATCGCGTCGATCACCCTGTACCAGCCGGACAACGCGCGGCCGCACTACGCGGTCGGCTCGATCGCGTGA

Protein

MLDLEIIPERSLGCDSWEFVLGMHFSQSVAIIQSQVGTIRGVQVLYSDQNPLSVDLVINMPQDGMRLIFDPVAQRLKIIEIYNMKLVKLRYSGMCFNSPEITPSIEQVEHCFGATHPGLYDSQRHLFALNFRGLSFYFPVDSKFEPGYAHGLGSLQFPNGGSPVVSRTTIYYGSQHQLSSNTSSRVSGVPLPDLPLSCYRQQLHLRRCDVLRNTTSTMGLRLHMFTEGTSRALEPSQVALVRVVRFGDSCQGVARALGAPARLYYKADDKMRIHRPTARRRPPPASDYLFNYFTLGLDVLFDARTNQVKKFVLHTNYPGHYNFNMYHRCEFELTVQPDKSEAHSLVESGGGVAVTAYSKWEVVSRALRVCERPVVLNRASSTNTTNPFGSTFCYGYQDIIFEVMSNNYIASITLYQPDNARPHYAVGSIA

Similarity

Belongs to the UPF0183 family.
Belongs to the eukaryotic-type primase small subunit family.
Belongs to the mitochondrial carrier (TC 2.A.29) family.

Keywords

Complete proteome   Reference proteome  

Feature

chain  UPF0183 protein CG7083

Uniprot

H9J4A9   A0A194QBI1   A0A2H1WB94   A0A212FL91   A0A1E1WPY5   A0A2J7PSG0   + More
A0A2A4IVK6   Q16XR9   A0A1Q3G436   A0A1Q3G3Y1   A0A067R9K2   A0A026W2H1   E9IBY1   A0A158NKP3   A0A0K8TM62   A0A195BNE9   A0A195FCT8   A0A182F9E7   A0A2M4AD94   W5JE23   A0A0C9R7L0   T1PDM6   A0A088AJ10   U5EUJ9   A0A182NFV4   A0A1B0CRP2   A0A182RQP6   A0A182QXF3   A0A182XXB9   A0A182VXT1   A0A182MPS9   A0A232FDD7   A0A182JD99   A0A1A9VYL3   B4KYC7   A0A182JNQ4   Q9VSH9   B4LDJ5   A0A1B0AYA4   B3M8K3   B3NFT5   D3TNA0   A0A1B6CXB5   B4QLM8   A0A0K8TVY4   A0A182UQG7   A0A182LAN7   Q7QFV3   A0A182I8R0   B4PG42   A0A182TZX0   A0A182WV36   A0A1I8NM46   B4N4C0   A0A034VKM9   A0A0A1XJZ8   A0A1L8ED78   W8AMG6   Q2LYM7   B4H624   A0A0M5J5U2   A0A1W4UFA5   B4IZF7   A0A3B0KHS5   A0A1W4WVE4   A0A1Y1N9W1   A0A182P764   B0WKL6   E2AJV7   N6UK03   A0A195DHB6   F4WWI2   A0A182GMH8   A0A1B6MN84   A0A1L8DB38   A0A1B6F3S6   A0A1B6JX09   N6TNI8   A0A0C9RAF8   A0A2A3EJH1   A0A1B6HWB5   A0A0L0CTF5   K7J8D9   D6WRZ0   A0A1J1I0A0   A0A084VC14   A0A0L7R8J3   A0A3R7Q381   J9JVU9   A0A0P4W3Z3   A0A2H8TES3   A0A195CJ06   A0A2S2QUC5   T1IM16   A0A0M8ZRP7   A0A2R2ML73   C3YLC2   A0A210QMX7   A0A0P5Y6W4   A0A0P6A0C3  

EC Number

2.7.7.-

Pubmed

19121390    26354079    22118469    17510324    24845553    24508170    + More
30249741    21282665    21347285    26369729    20920257    23761445    25315136    25244985    28648823    17994087    10731132    12537572    20353571    22936249    20966253    12364791    14747013    17210077    17550304    25348373    25830018    24495485    15632085    28004739    20798317    23537049    21719571    26483478    26108605    20075255    18362917    19820115    24438588    18563158    28812685   

EMBL

BABH01042110    BABH01042111    BABH01042112    KQ459460    KPJ00791.1    ODYU01007514    + More
SOQ50349.1    AGBW02007815    OWR54518.1    GDQN01001941    JAT89113.1    NEVH01021928    PNF19278.1    NWSH01005725    PCG64007.1    CH477534    EAT39373.1    GFDL01000516    JAV34529.1    GFDL01000530    JAV34515.1    KK852611    KDR20257.1    KK107467    QOIP01000013    EZA50277.1    RLU15167.1    GL762137    EFZ21967.1    ADTU01018943    GDAI01002365    JAI15238.1    KQ976439    KYM86726.1    KQ981693    KYN37859.1    GGFK01005371    MBW38692.1    ADMH02001495    ETN62316.1    GBYB01008787    JAG78554.1    KA646887    AFP61516.1    GANO01002291    JAB57580.1    AJWK01025068    AXCN02000249    AXCM01018583    NNAY01000392    OXU28695.1    CH933809    EDW17706.1    AE014296    BT031145    CH940647    EDW68933.1    JXJN01005581    CH902618    EDV39977.1    CH954178    EDV50697.1    EZ422902    ADD19178.1    GEDC01019204    JAS18094.1    CM000363    CM002912    EDX09688.1    KMY98356.1    GDHF01033878    GDHF01003897    JAI18436.1    JAI48417.1    AAAB01008844    EAA05974.3    APCN01003108    CM000159    EDW93186.1    CH964095    EDW78994.1    GAKP01016582    JAC42370.1    GBXI01003015    JAD11277.1    GFDG01002112    JAV16687.1    GAMC01016610    JAB89945.1    CH379069    EAL29835.1    CH479212    EDW33241.1    CP012525    ALC43881.1    CH916366    EDV96712.1    OUUW01000009    SPP85296.1    GEZM01011792    JAV93435.1    DS231974    EDS29947.1    GL440100    EFN66273.1    APGK01016863    APGK01016864    APGK01016865    APGK01016866    KB739988    KB631951    ENN82055.1    ERL87436.1    KQ980886    KYN11854.1    GL888406    EGI61524.1    JXUM01074651    KQ562843    KXJ75026.1    GEBQ01002573    JAT37404.1    GFDF01010550    JAV03534.1    GECZ01029001    GECZ01024921    JAS40768.1    JAS44848.1    GECU01003955    JAT03752.1    ENN82054.1    ERL87435.1    GBYB01003776    JAG73543.1    KZ288226    PBC31915.1    GECU01028719    JAS78987.1    JRES01000036    KNC34679.1    KQ971351    EFA06416.2    CVRI01000036    CRK92996.1    ATLV01009976    KE524560    KFB35508.1    KQ414632    KOC67159.1    QCYY01000481    ROT84874.1    ABLF02019451    ABLF02019457    GDRN01074349    JAI63258.1    GFXV01000788    MBW12593.1    KQ977649    KYN00726.1    GGMS01012148    MBY81351.1    JH430941    KQ435922    KOX68596.1    GG666527    EEN58859.1    NEDP02002762    OWF50085.1    GDIQ01132647    GDIP01075355    LRGB01002937    JAL19079.1    JAM28360.1    KZS05420.1    GDIP01049344    JAM54371.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000235965    UP000218220    UP000008820    + More
UP000027135    UP000053097    UP000279307    UP000005205    UP000078540    UP000078541    UP000069272    UP000000673    UP000095301    UP000005203    UP000075884    UP000092461    UP000075900    UP000075886    UP000076408    UP000075920    UP000075883    UP000215335    UP000075880    UP000078200    UP000009192    UP000075881    UP000000803    UP000008792    UP000092460    UP000007801    UP000008711    UP000000304    UP000075903    UP000075882    UP000007062    UP000075840    UP000002282    UP000075902    UP000076407    UP000095300    UP000007798    UP000001819    UP000008744    UP000092553    UP000192221    UP000001070    UP000268350    UP000192223    UP000075885    UP000002320    UP000000311    UP000019118    UP000030742    UP000078492    UP000007755    UP000069940    UP000249989    UP000242457    UP000037069    UP000002358    UP000007266    UP000183832    UP000030765    UP000053825    UP000283509    UP000007819    UP000078542    UP000053105    UP000085678    UP000001554    UP000242188    UP000076858   

PRIDE

H9J4A9    Q9VSH9   

Pfam

PF03676   UPF0183        + More
PF01896   DNA_primase_S
PF04757   Pex2_Pex12
PF03126   Plus-3
PF00153   Mito_carr

Interpro

IPR005373   UPF0183        + More
IPR039156   UPF0183/BROMI       
IPR014052   DNA_primase_ssu_euk/arc       
IPR002755   DNA_primase_S       
IPR006845   Pex_N       
IPR017907   Znf_RING_CS       
IPR036128   Plus3-like_sf       
IPR004343   Plus-3_dom       
IPR018108   Mitochondrial_sb/sol_carrier       
IPR023395   Mt_carrier_dom_sf       

SUPFAM

SSF159042   SSF159042        + More
SSF103506   SSF103506       

Gene 3D

2.170.260.30     1.50.40.10    

CDD

cd04860  AE_Prim_S

ProteinModelPortal

H9J4A9   A0A194QBI1   A0A2H1WB94   A0A212FL91   A0A1E1WPY5   A0A2J7PSG0   + More
A0A2A4IVK6   Q16XR9   A0A1Q3G436   A0A1Q3G3Y1   A0A067R9K2   A0A026W2H1   E9IBY1   A0A158NKP3   A0A0K8TM62   A0A195BNE9   A0A195FCT8   A0A182F9E7   A0A2M4AD94   W5JE23   A0A0C9R7L0   T1PDM6   A0A088AJ10   U5EUJ9   A0A182NFV4   A0A1B0CRP2   A0A182RQP6   A0A182QXF3   A0A182XXB9   A0A182VXT1   A0A182MPS9   A0A232FDD7   A0A182JD99   A0A1A9VYL3   B4KYC7   A0A182JNQ4   Q9VSH9   B4LDJ5   A0A1B0AYA4   B3M8K3   B3NFT5   D3TNA0   A0A1B6CXB5   B4QLM8   A0A0K8TVY4   A0A182UQG7   A0A182LAN7   Q7QFV3   A0A182I8R0   B4PG42   A0A182TZX0   A0A182WV36   A0A1I8NM46   B4N4C0   A0A034VKM9   A0A0A1XJZ8   A0A1L8ED78   W8AMG6   Q2LYM7   B4H624   A0A0M5J5U2   A0A1W4UFA5   B4IZF7   A0A3B0KHS5   A0A1W4WVE4   A0A1Y1N9W1   A0A182P764   B0WKL6   E2AJV7   N6UK03   A0A195DHB6   F4WWI2   A0A182GMH8   A0A1B6MN84   A0A1L8DB38   A0A1B6F3S6   A0A1B6JX09   N6TNI8   A0A0C9RAF8   A0A2A3EJH1   A0A1B6HWB5   A0A0L0CTF5   K7J8D9   D6WRZ0   A0A1J1I0A0   A0A084VC14   A0A0L7R8J3   A0A3R7Q381   J9JVU9   A0A0P4W3Z3   A0A2H8TES3   A0A195CJ06   A0A2S2QUC5   T1IM16   A0A0M8ZRP7   A0A2R2ML73   C3YLC2   A0A210QMX7   A0A0P5Y6W4   A0A0P6A0C3  

KEGG

101739002    no KO assigned | (RefSeq) UPF0183 protein CG7083

GO

GO:0003896   GO:0005802   GO:0043001   GO:0003677   GO:0016570   GO:0016593   GO:0006368   GO:0016021   GO:0030425   GO:0030672  

PANTHER

PTHR13465   PTHR13465:SF2   PTHR10536  

Length:

430

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01128

Exp number, first 60 AAs:

0.00214

Total prob of N-in:

0.00144

outside

1  -  430

 

 

Pi

276.960754

Theta

165.935875

Tajima's D

0.116811

CLR

0.985321

CSRT

0.400429978501075

Interpretation

Uncertain