SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12111
Pre Gene Modal
BGIBMGA009686
Annotation
PREDICTED:_ceramide_glucosyltransferase_[Papilio_machaon]
Location in the cell
PlasmaMembrane   Reliability : 4.043
 

Sequence

CDS
ATGATCCCTATAGTGTATACGGTGTATGGATTCGCGCTTTTCTTTATTGTCGCGTGGATTTGTTTGTGGCTAATACATATTATGGCGCTATCGTACTGTAAATGGAAACTTCACAGGACGGTGGACCGGTCGCCGCCCGAACAGCCTTACCCGGGCGTGTCGATCTTGAAGCCGCTCACCGGTGTAGATCCGAACCTTTTCTCGAATCTAGAGACTTTCTTTTTACTCGACTATCCGACGTACGAACTTTTGTTTTGTGTTGAGAACGAAAACGATCCGGCTATAATGTTAGTGAACAGTCTCCTACAGAAGTATCCTCAAGTGGAAGCTCGCTTGTTCGTCGGCGGACTGAATGTCGGAGTGAACCCGAAGATCAACAACATGCAACAAGGATATATCGCCGCCAAATACCCTCTTATCGTAATAAGCGACGCTGGGATCCGAATGCGAGACGATACCCTGCTGGACATGGTGCAACACTTGAAAGAGAACGTCGCGATCGTTCACCAGATGCCCTTCGCGTATGATGCCGAAGGATTTGCTGCTGTTTACGAGAAAGTATACTTCGGAACGTCACAGGCGCGAATGTACCTCGGAGCCGATTTTCTCGGCATCAATTGTCACGTCGGCATGTCGACCTTGATCCGGCGTTGCGCTATCGAGGAAGCAGGAGGACTTGCCGTGTTCGCGGACTATCTCGCTGAAGATTACTTTATGGCAAAGGAAATAGTATCGCGAGGATGGAAGATGCGGGTGGCGTCGTTGCCGGCGCTGCAGAATTCTGGGACTCGGTCTGTGGGCGCGCTGCAGGCCCGGCTCACACGGTGGGCACGGTTGCGCGTCGCCATGGTGCCGGCCACTACTCTGCTGGAGCCACTCAGCGAGTGTATGCCGTTGGGCGCAGGAGCCGCCTGGGCTGCAGGACAGCTCTTTGGAGCAGAGCCATTGGCCTTTTTCCTAGTGCATGTGTTAGTGTGGTTTCTCTCAGACTGGTTAATGTTACGGTCGGTGCAGAATGGTTCACCTCCCTTTACGAAAGTGCAATTCTTACTGGGCTGGGTTTGGAACGAGTGTTGTGCACCTTTCGTACTTGCAGTGGCGTTGCTCAGTCCTGAAATTTCATGGAGGACTCGCAGTTATCGCTTGGACTGGGGTGGCCGTGCCCGTGAACTCAGCTCCAAACTCAAATTTTAA
Protein
MIPIVYTVYGFALFFIVAWICLWLIHIMALSYCKWKLHRTVDRSPPEQPYPGVSILKPLTGVDPNLFSNLETFFLLDYPTYELLFCVENENDPAIMLVNSLLQKYPQVEARLFVGGLNVGVNPKINNMQQGYIAAKYPLIVISDAGIRMRDDTLLDMVQHLKENVAIVHQMPFAYDAEGFAAVYEKVYFGTSQARMYLGADFLGINCHVGMSTLIRRCAIEEAGGLAVFADYLAEDYFMAKEIVSRGWKMRVASLPALQNSGTRSVGALQARLTRWARLRVAMVPATTLLEPLSECMPLGAGAAWAAGQLFGAEPLAFFLVHVLVWFLSDWLMLRSVQNGSPPFTKVQFLLGWVWNECCAPFVLAVALLSPEISWRTRSYRLDWGGRARELSSKLKF

Summary

EMBL
BABH01017505    JTDY01007617    KOB65072.1    GDQN01010635    JAT80419.1    NWSH01001664    + More
PCG70482.1    ODYU01010584    SOQ55797.1    KQ459838    KPJ19728.1    KQ459460    KPJ00792.1    AGBW02013827    OWR42693.1    KZ150305    PZC71513.1    NEVH01013202    PNF29910.1    KK107234    QOIP01000013    EZA54929.1    RLU15258.1    LBMM01002867    KMQ94270.1    GL761952    EFZ22574.1    LJIG01022815    KRT78575.1    KQ981512    KYN40902.1    KQ434792    KZC05452.1    KQ980313    KYN16699.1    JRES01001179    KNC24752.1    KQ982617    KYQ53769.1    CH902619    EDV37107.1    GDAI01002236    JAI15367.1    KQ976478    KYM83801.1    ADTU01027126    KZ288215    PBC32653.1    ACPB03020356    KA648334    AFP62963.1    GEZM01088569    JAV58098.1    GANO01002046    JAB57825.1    KQ978503    KYM93408.1    CM000362    CM002911    EDX08162.1    KMY95701.1    GL450237    EFN81347.1    GBYB01008104    JAG77871.1    AE013599    AY118335    AAF46795.1    AAM48364.1    CM000158    EDW91151.1    GDKW01001753    JAI54842.1    DS235848    EEB18613.1    CH954179    EDV55548.1    GBHO01044243    GBHO01044241    GDHC01000152    JAF99360.1    JAF99362.1    JAQ18477.1    CH940648    EDW61092.1    CH480824    EDW56720.1    CH963848    EDW73890.1    GGFK01009774    MBW43095.1    GL443213    EFN62430.1    ADMH02001278    ETN63252.1    UFQT01000048    SSX18966.1    GBRD01008578    GBRD01008575    JAG57246.1    KK853224    KDR09706.1    KK854557    PTY16832.1    CH916367    EDW01267.1    GFDF01002659    JAV11425.1    GBGD01001771    JAC87118.1    CP012524    ALC41196.1    GFTR01005729    JAW10697.1    GECL01000526    JAP05598.1    GEDC01014991    GEDC01008797    JAS22307.1    JAS28501.1    AXCN02001027    GBXI01004133    JAD10159.1    GAKP01001663    GAKP01001662    GAKP01001661    JAC57291.1    GL888284    EGI63245.1    GECU01014568    JAS93138.1    CH477198    EAT48292.1    APCN01003310    AAAB01008986    EAU75755.1    GL732624    EFX70139.1    KQ414735    KOC62213.1    OUUW01000001    SPP75378.1    CH479183    EDW35882.1    AXCM01001414    CAEY01000417    GALA01001101    JAA93751.1    APGK01047232    KB741077    KB631792    ENN74253.1    ERL86120.1    GDIP01056704    JAM47011.1    CM000071    EAL26280.1    GDIQ01039028    LRGB01000141    JAN55709.1    KZS20635.1    DS233582    EDS30631.1    GDIP01009432    JAM94283.1    CH933808    EDW09880.1    GFDL01011621    JAV23424.1    GFDL01011646    JAV23399.1    JXUM01077332    KQ563002    KXJ74655.1    NCKU01003556    NCKU01002258    RWS07297.1    RWS09995.1    ATLV01023950    KE525347    KFB50159.1    GAMC01003847    GAMC01003846    GAMC01003842    JAC02709.1    JH431789    CVRI01000075    CRL08446.1    KQ971307    EFA12048.1    LJIJ01000144    ODN01675.1    GDIQ01009638    JAN85099.1   
Pfam
PF13506   Glyco_transf_21        + More
PF08347   CTNNB1_binding
PF00505   HMG_box
Interpro
IPR029044   Nucleotide-diphossugar_trans        + More
IPR025993   Ceramide_glucosylTrfase       
IPR009071   HMG_box_dom       
IPR027397   Catenin_binding_dom_sf       
IPR013558   CTNNB1-bd_N       
IPR036910   HMG_box_dom_sf       
SUPFAM
SSF53448   SSF53448        + More
SSF47095   SSF47095       
Gene 3D
PDB
5EJZ     E-value=0.0530474,     Score=85

Ontologies

Topology

Length:
397
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
63.3827200000001
Exp number, first 60 AAs:
22.90353
Total prob of N-in:
0.26179
POSSIBLE N-term signal
sequence
inside
1  -  4
TMhelix
5  -  27
outside
28  -  397
 
 

Population Genetic Test Statistics

Pi
75.19028
Theta
153.454516
Tajima's D
-1.601831
CLR
18.435381
CSRT
0.0491475426228689
Interpretation
Uncertain
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