Gene
KWMTBOMO12107
Pre Gene Modal
BGIBMGA004349
Annotation
PREDICTED:_zinc_finger_protein_ubi-d4_A-like_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.887
Sequence
CDS
ATGTCAGGTGATGTCACTGAATCGGCGTCTGCTAGTAAAATGGCGGCCGCTGAGATTCAGATAGTAAATCCTCAAAATTTAACAAAAATCGAAAGTTTTCTCCATGATCCGAGTTATAAAGAGATCATTGAGAATTCGTCCACGTTCAACTCGAGATTATGTGCGGAAAGGAGAATGCGTATGCCCTTCATTGACACGCAGACCGGTGTCGCTCAGAGCCACTGCAATTTGTTCATGACTAGGAGACAGCGTATGCCTGGTCAGAAAGAAGGTCAAGTCTACACATATCCAGCGCAAAGATGGCGGAAAGCTCGACGTCAGTACTTGACAATGTCATCAACTAGATGGGGATGGAACAGGGCAGCGGATCTAGCAGATAATACTGGTGATGGAGAAAACAGTTCAGGCTTACCTGATGCACTAGGTGGAGATGACAGTAGAGATGGATCGCAGACTGCAGCAAAAGATGATCCAAAGGAATGGTTTTATGATGAACTGGCAATGGAGGAAATGGAAACTGGAGAAGAGCCTGAAGCAGAGTCAGATGAAGATTATTATGATGATACATACGCAAATAGGCGCAAACGTCGTGGTGGAGCTACGCCTACTGGACCTGGTTCCAGGGGAGGGAGAACAAGGAAATCTCAGCCTGATGATACACCTGCTAAAAGGGGCAGAGCAGGTCGAGGACGGCGGCGTGCGGGTCAGGGCACGCTGCCTTACGAGGTGCCGGGCGACGCGGAGAAGCCCTACGGCTGCGAACTGTGCGGTGCTAAGTACAAAACTCGCGCCGGCCTCACGTACCACTTCACTCACACGCACAAGGACCCCCCGCCCGGGGCCAGTACGTCGGCGGTCGCGGGCGGCAGCGACGGCGACTCCCGGGACAGCCCGCACGGCACGCCCGCGCCCAACGCGCAATCCGCCCAAGCGCAGCCCGCCACTGAGTACCAGGATAGCTACGTGACGTTCCTGAACAATCCTGCCGCCGGTGCTGCTGCTGTAGCGACTCCGCCCGCGCGTCGTCCGACGCCGCCTCCTCGTCCGGCTTCAGCTGACACGTCGAGTTCGGATTCCGCGCACGCTCCGCTCATACCGCCCGCTCCCGCTCCGGTCCCCGCTCCCGCTCCTCCTGTGGTACCGGTGCCGGTCGCGAGCGCCAGCGCCGTTCTGCCGATACTTAAGGAGCCCGAGACTAAGGCTTCGCCGTCACCGTACTGCGACTTCTGCCTGGGCGACGACCGCGAGAACCGGAAGACGGGAACTCCCGAGGAGCTGGTCAGCTGCTCGGACTGCGGCCGATCAGGCCACCCCACTTGTCTCCAGTTCACCGTGAACATGATAGTGTCGGTGCGGAAGTACCGATGGCAGTGTATCGAGTGCAAGTGTTGTTCCGTGTGCGGCACGAGCGATAACGATGACCAGCTGTTGTTCTGTGACGACTGCGACCGCGGCTACCACATGTACTGCCTGGCGCCGCCGCTCGACACGCCGCCGGAGGGCTCGTGGTCCTGCGCGCTCTGCATCAAGGAGTTCCACCAGCCCAGGGTCGCTCTGCAGGTACAATAA
Protein
MSGDVTESASASKMAAAEIQIVNPQNLTKIESFLHDPSYKEIIENSSTFNSRLCAERRMRMPFIDTQTGVAQSHCNLFMTRRQRMPGQKEGQVYTYPAQRWRKARRQYLTMSSTRWGWNRAADLADNTGDGENSSGLPDALGGDDSRDGSQTAAKDDPKEWFYDELAMEEMETGEEPEAESDEDYYDDTYANRRKRRGGATPTGPGSRGGRTRKSQPDDTPAKRGRAGRGRRRAGQGTLPYEVPGDAEKPYGCELCGAKYKTRAGLTYHFTHTHKDPPPGASTSAVAGGSDGDSRDSPHGTPAPNAQSAQAQPATEYQDSYVTFLNNPAAGAAAVATPPARRPTPPPRPASADTSSSDSAHAPLIPPAPAPVPAPAPPVVPVPVASASAVLPILKEPETKASPSPYCDFCLGDDRENRKTGTPEELVSCSDCGRSGHPTCLQFTVNMIVSVRKYRWQCIECKCCSVCGTSDNDDQLLFCDDCDRGYHMYCLAPPLDTPPEGSWSCALCIKEFHQPRVALQVQ
Summary
Uniprot
ProteinModelPortal
PDB
5VDC
E-value=3.39051e-46,
Score=468
Ontologies
GO
Topology
Length:
522
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00182
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00135
outside
1 - 522
Population Genetic Test Statistics
Pi
199.657747
Theta
171.962254
Tajima's D
0.15965
CLR
0.448614
CSRT
0.413679316034198
Interpretation
Uncertain
