Gene

KWMTBOMO12099

Pre Gene Modal

BGIBMGA004341

Annotation

PREDICTED:_protein_tyrosine_phosphatase_domain-containing_protein_1-like_[Bombyx_mori]

Location

Bomo_Chr20(+):7317446-7339862      View in EpiBrowser

Full name

Protein tyrosine phosphatase domain-containing protein 1      

Location in the cell

Mitochondrial   Reliability : 1.823 Nuclear   Reliability : 1.552

CDS

ATGGATGACGATCCGAGCGTGAGTAGATGTCCATTGTGGAAGCGATTGGGATGCTCTCGCTTAACAAACCTCTGCAAGAGACGAAGGGTCGCTCCTGATCATGATGCTCATGGAAAAACGAACGAAAGGAGTCGTGAATCCCGCAGAAGGATCAATCACCCCCCGGCAGCTCTGTACAGCTCGCTTGGAGAACGTTTGCGCACCAGTACACCATCAGCATTACAATGCGCACTGTTCTGCGGGGGGTCGAGATGCCAGTACGAGTTACCACAGCAGAGAAATGCGGCGATACAAGGAATATACTCTAGCTGGGTTACAGACGACATATTGGCGATGGCACGACCCAGTACGGCCGCTATTGCCGCCAGGAATATTATACAACAGTTCCATAGTTGGGGTATTCGCACAGTGATAAACCTCCAGATCCCGGGGGAACATGCCAGCTGCGGACCTCCGCTTACGAGTTCCGGGTTCACCTACGACCCTACCATATTCATGGCTAATGACATATACTACTATAATTTCGCGTGGCCCGACTACGGGGAGGCTAGTCTGAGCGGACTCCTGGATATGGCTAAAGTCCTGTCTTTTGCGCTGCAAGAAGGAAAAGTTGCGATACACTGTCATGCAGGATTAGGTAGAACAGGAGTCCTGATTGCGTGTTACTTAGTTTATGCTTTACGTATCCGCGCCAACGATGCCATCCGTTTGGTGCGCAAGAGAAGACCAAAATCGATTCAGACATCAGGACAGATATTGTGTGTACAGCAATTCGAGCATTATCTGCTACCACAAACGGTCGTTTTTAGCTCGAAAGAGCCCATACAACTCACAAAGGACCCGAAAACACAGGAGTTCACGCTGCGTCAGTATTTATACCGCCAAAGAGCTACACTACACGGATTAGATGAGAGAGTCTTCAAAGAATTGCCAAAGGTATTGATTAAATCGGTTGCTTCCGAAAGGGCCAATCTGCATTCTAATATGATGTACTCTTTATCCAATGGTGTTATCGATAACGTACCATAA

Protein

MDDDPSVSRCPLWKRLGCSRLTNLCKRRRVAPDHDAHGKTNERSRESRRRINHPPAALYSSLGERLRTSTPSALQCALFCGGSRCQYELPQQRNAAIQGIYSSWVTDDILAMARPSTAAIAARNIIQQFHSWGIRTVINLQIPGEHASCGPPLTSSGFTYDPTIFMANDIYYYNFAWPDYGEASLSGLLDMAKVLSFALQEGKVAIHCHAGLGRTGVLIACYLVYALRIRANDAIRLVRKRRPKSIQTSGQILCVQQFEHYLLPQTVVFSSKEPIQLTKDPKTQEFTLRQYLYRQRATLHGLDERVFKELPKVLIKSVASERANLHSNMMYSLSNGVIDNVP

Description

May play roles in cilia formation and/or maintenance.

Similarity

Belongs to the protein-tyrosine phosphatase family. Non-receptor class PTPDC1 subfamily.

Keywords

Complete proteome   Hydrolase   Protein phosphatase   Reference proteome  

Feature

chain  Protein tyrosine phosphatase domain-containing protein 1

Uniprot

A0A0N1IJQ1   A0A212EGT3   A0A067R4R8   A0A2J7QJY8   A0A139WNW9   A0A158NDE6   + More
A0A195DV59   F4X0H7   A0A195F745   A0A151XG79   E2AV10   A0A151I2D1   A0A026VXT7   A0A3L8D596   A0A0L7R746   A0A1W4X2Q8   A0A154P5B8   A0A0K2TW94   A0A0K2TVT4   E2B7E8   A0A0K2TVM4   A0A0N0U394   A0A226DIL4   A0A0C9R4S3   A0A1D2N6H6   A0A3L8RAR0   A0A3B4A6S0   A0A3Q3T2R2   A0A3Q3NGF1   A0A218UGL7   A0A3B4A5I1   H3BDV4   A0A1W4YML5   A0A3Q3EVA4   H0YZX2   A0A3Q2ZR05   H9G3Z4   A0A0P7YW49   A0A1W4YME7   A0A2I4DAC8   A0A3Q3A4X3   A0A2I4DAC6   A0A3Q4HZZ5   A0A3B5LM62   A0A2I0UAU5   G3WF36   A0A3Q4B5N3   A0A3Q0QZ46   A0A1A8QJT7   M3ZZA3   A0A2I4DAD7   E1C6I5   A0A1A8LJD0   A0A3Q2TUK7   A0A3Q2NS55   A0A1A8PG82   A0A3M0JHW7   A0A2D4FD22   A0A3B4FFX9   A0A3Q2VIU3   A0A3P8RBF2   A0A3P9BFZ9   V8NXB5   F6PVD7   A0A1A8VG55   E6ZGB2   A0A3Q4HZY6   A0A1A7YCK4   A0A1A8JKZ9   A0A091P767   A0A1A8KDS5   A0A3Q3WKT7   F1QYQ8   U3JX10   A1L1R5   A0A2I4DAC7   F7FGN4   G3TJ64   A0A091WJI0   A0A1A8E9T7   A0A1A8BMX6   A0A3Q1HC67   A0A3B3WIC8   K7GC80   A0A0F7Z2D5   A0A093GL92   A0A087XU03   A0A0A0ARG8   A0A091UN52   F7H746   A0A1V4JAS2   A0A3P9Q9N8   A0A093J4I0   A0A091M8L9   A0A093QGK4   U3BZ35   A0A093FIR3   A0A2K5CKU6   A0A093BK90  

EC Number

3.1.3.-

Pubmed

26354079    22118469    24845553    18362917    19820115    21347285    + More
21719571    20798317    24508170    30249741    27289101    30282656    25463417    9215903    20360741    21881562    15592404    25186727    21709235    23542700    24297900    17495919    23594743    18464734    17381049    25243066   

EMBL

KQ459838    KPJ19712.1    AGBW02015031    OWR40688.1    KK852702    KDR18115.1    + More
NEVH01013548    PNF28894.1    KQ971307    KYB29622.1    ADTU01012255    KQ980341    KYN16449.1    GL888498    EGI59969.1    KQ981744    KYN36425.1    KQ982173    KYQ59394.1    GL442974    EFN62728.1    KQ976547    KYM80911.1    KK107609    EZA48495.1    QOIP01000014    RLU15028.1    KQ414646    KOC66576.1    KQ434822    KZC07135.1    HACA01012749    CDW30110.1    HACA01012748    CDW30109.1    GL446169    EFN88384.1    HACA01012747    CDW30108.1    KQ435896    KOX69271.1    LNIX01000020    OXA44026.1    GBYB01001831    JAG71598.1    LJIJ01000198    ODN00576.1    QUSF01000470    RLV76637.1    MUZQ01000326    OWK52721.1    AFYH01044236    AFYH01044237    AFYH01044238    ABQF01051820    AAWZ02020491    AAWZ02020492    JARO02002577    KPP72350.1    AADN05000356    KZ505929    PKU43123.1    AEFK01085807    HAEH01011967    SBR93598.1    HAEF01007563    HAEG01011502    SBR44945.1    HAEI01002362    SBR80047.1    QRBI01000145    RMB99920.1    IACJ01063481    LAA45388.1    AZIM01001439    ETE66909.1    HAEJ01018399    SBS58856.1    FQ310506    CBN80629.1    HADW01003502    HADX01005443    SBP27675.1    HAED01023053    SBR09875.1    KK653372    KFQ03206.1    HAEE01010311    SBR30361.1    CR548622    AGTO01001758    BC129183    BC131875    AAPN01062157    AAPN01062158    AAPN01062159    AAPN01062160    AAPN01062161    AAPN01062162    AAPN01062163    AAPN01062164    AAPN01062165    AAPN01062166    KK735759    KFR15729.1    HAEA01014740    SBQ43220.1    HADZ01004060    SBP68001.1    AGCU01105293    AGCU01105294    GBEX01003769    JAI10791.1    KL216687    KFV71050.1    AYCK01015303    KL872890    KGL97179.1    KL409829    KFQ92101.1    LSYS01008300    OPJ69154.1    KK573287    KFW08848.1    KL320887    KFP54841.1    KL418970    KFW87656.1    GAMT01000702    GAMS01005549    GAMR01009320    GAMP01002091    JAB11159.1    JAB17587.1    JAB24612.1    JAB50664.1    KK634607    KFV57617.1    KL449090    KFV04185.1   

Proteomes

UP000053240    UP000007151    UP000027135    UP000235965    UP000007266    UP000005205    + More
UP000078492    UP000007755    UP000078541    UP000075809    UP000000311    UP000078540    UP000053097    UP000279307    UP000053825    UP000192223    UP000076502    UP000008237    UP000053105    UP000198287    UP000094527    UP000276834    UP000261520    UP000261640    UP000197619    UP000008672    UP000192224    UP000264800    UP000007754    UP000001646    UP000034805    UP000192220    UP000000539    UP000261580    UP000261380    UP000007648    UP000261620    UP000261340    UP000002852    UP000265000    UP000269221    UP000261460    UP000264840    UP000265100    UP000265160    UP000002280    UP000000437    UP000016665    UP000002279    UP000007646    UP000053605    UP000265040    UP000261480    UP000007267    UP000053875    UP000028760    UP000053858    UP000053283    UP000008225    UP000190648    UP000242638    UP000233020   

PRIDE

A1L1R5   

Pfam

PF00782   DSPc

Interpro

IPR020422   TYR_PHOSPHATASE_DUAL_dom        + More
IPR000340   Dual-sp_phosphatase_cat-dom       
IPR000387   TYR_PHOSPHATASE_dom       
IPR016130   Tyr_Pase_AS       
IPR008936   Rho_GTPase_activation_prot       
IPR029021   Prot-tyrosine_phosphatase-like       
IPR003595   Tyr_Pase_cat       
IPR000242   PTPase_domain       

SUPFAM

SSF48350   SSF48350        + More
SSF52799   SSF52799       

Gene 3D

3.90.190.10     1.10.555.10    

ProteinModelPortal

A0A0N1IJQ1   A0A212EGT3   A0A067R4R8   A0A2J7QJY8   A0A139WNW9   A0A158NDE6   + More
A0A195DV59   F4X0H7   A0A195F745   A0A151XG79   E2AV10   A0A151I2D1   A0A026VXT7   A0A3L8D596   A0A0L7R746   A0A1W4X2Q8   A0A154P5B8   A0A0K2TW94   A0A0K2TVT4   E2B7E8   A0A0K2TVM4   A0A0N0U394   A0A226DIL4   A0A0C9R4S3   A0A1D2N6H6   A0A3L8RAR0   A0A3B4A6S0   A0A3Q3T2R2   A0A3Q3NGF1   A0A218UGL7   A0A3B4A5I1   H3BDV4   A0A1W4YML5   A0A3Q3EVA4   H0YZX2   A0A3Q2ZR05   H9G3Z4   A0A0P7YW49   A0A1W4YME7   A0A2I4DAC8   A0A3Q3A4X3   A0A2I4DAC6   A0A3Q4HZZ5   A0A3B5LM62   A0A2I0UAU5   G3WF36   A0A3Q4B5N3   A0A3Q0QZ46   A0A1A8QJT7   M3ZZA3   A0A2I4DAD7   E1C6I5   A0A1A8LJD0   A0A3Q2TUK7   A0A3Q2NS55   A0A1A8PG82   A0A3M0JHW7   A0A2D4FD22   A0A3B4FFX9   A0A3Q2VIU3   A0A3P8RBF2   A0A3P9BFZ9   V8NXB5   F6PVD7   A0A1A8VG55   E6ZGB2   A0A3Q4HZY6   A0A1A7YCK4   A0A1A8JKZ9   A0A091P767   A0A1A8KDS5   A0A3Q3WKT7   F1QYQ8   U3JX10   A1L1R5   A0A2I4DAC7   F7FGN4   G3TJ64   A0A091WJI0   A0A1A8E9T7   A0A1A8BMX6   A0A3Q1HC67   A0A3B3WIC8   K7GC80   A0A0F7Z2D5   A0A093GL92   A0A087XU03   A0A0A0ARG8   A0A091UN52   F7H746   A0A1V4JAS2   A0A3P9Q9N8   A0A093J4I0   A0A091M8L9   A0A093QGK4   U3BZ35   A0A093FIR3   A0A2K5CKU6   A0A093BK90  

PDB

5Z5B     E-value=8.57948e-09,     Score=143

KEGG

101744892    K18078 protein tyrosine phosphatase domain-containing protein 1 [EC:3.1.3.-] | (RefSeq) protein tyro

GO

GO:0008138   GO:0007165   GO:0004725   GO:0060271   GO:0005737   GO:0005654   GO:0007224   GO:0006470   GO:0016311   GO:0016791   GO:0000049   GO:0000287   GO:0008033   GO:0003676   GO:0016787  

Length:

342

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.27032999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04498

outside

1  -  342

 

 

Pi

200.017109

Theta

17.754038

Tajima's D

0.376988

CLR

0.19212

CSRT

0.48027598620069

Interpretation

Uncertain