SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12097
Pre Gene Modal
BGIBMGA004275
Annotation
PREDICTED:_uncharacterized_protein_LOC106127961_isoform_X4_[Papilio_xuthus]
Location
Bomo_Chr20(-):7225627-7295085      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 4.325
 

Sequence

CDS
ATGGATCCTTTCACTCAGCGTATGTTAGAGAGAGCGCGTGCTAGACAAGAGAAAATCGACCAAAAACTCGCAAACTCTGGACAAACGGTTCCGAAGAGGAAACCACTAGCAGAGAATCTCTGCGTCTCTAAATCTGTTTCGGCACCTGGGAAGTCTCCTATTAAACCTGCTCGGGAGTCAATTACTTCGCCGAGGAAGTCTCTCAAAGCTGAAACACCTGTAAAATCTGGGCCGAAAAGGAATAGTACACAAAAATCTGACCAAACTCTTGTTACCTCGCCGTTAAGACCCCGAAACGACGTAGTTGTCACAAAAAAAGAGTTCAAAAGCCCACGAAAAGGTAGTCTGACCAGGCGTAACTCCGATGTGTCAGTGGAGATCAACATTTCACATAGAAACGATATACAAATCGAGGTGCAGGTTGAAGAGAGAGACACTCCCATAAGTGTGGTTTATGACTCGCAGGCGGATAGACAAAGTAGTGTAGTCATCAAGGAGATTGAAGAAGACACATCCAAGGAATTGGTCAAAAAGTCTATTGTAATGTCAAACAGCAAAGACGATAAGAGCGGACTCAGACACAACATGAAGTCACGACTCGACAGACTTGGTAATCTATATTCAGATAAACCAGAGCTCTCTTCGCCTATTCACCGTACGGAGTCGGAGTTCACATCAGCGACGCCGCCTTCGGAGTTCGAAGTGAAAAGTAAACAGACAAAACCACAAGATGGGAAGAAGAAATTTGGTAGACTCGCAGCCCTCGCTGATCAGATTAACACTTGGGAGGATGATTTGACCCATCATAGTTTTCAACCAGAGCCTAATAAGAAAACTGCAAACAATTTCAAAAGCAAAAAACTTGAAGATTCCACTCTGGATGTCTCCATACATTCCATAAAGGATATTGACAAGGCTTTGAAAGTTACTCAGAATAAAAAGACATCACACTACACTAGCAACAAGACATCGACGAAGCAGGTGAACGAATGTCAAAGATTGAAAAAGCAAATCGTCGCGGAACTGGAGCCGAAGCGTGCATCGACTACCCCCAGTGCAACAGCAGCCCCCGCGATGGCGACAATGGTGGCCAGCGCGCCGCCGGCTAAACCCACCGTGTCTAAGAAACCTTCAATAAAAAAATATCACGCGCCCACACCGCCTGATAAAGTGCTCACCGACGATGAATGCGAAATGGAAAAAGACAAAGAGAACAATGCTGTTCAAGAGAACGAAAACGAAGCGGACGATTGTATACAAACAAAAAACAAACCGGCTGACGAGAGACCCGGTTCCGGGGAAAGGGGATCGCCAATTGTAAAGAGATTGGCGCCTAAATTGAACGGAAATATAGACAGAAGTTCGGTCTTGGGTAAGGCCGCGATGTTCGAAGCGGGCAGTCCGAAGGCCAAGGAAAAGGATCCCGCGGAAATGTCTCTTCGCGAACGAAAAGCGTTGTTCGAGAAAAATAAGGGCACTGCAATTATCCCCAAAGCACCATTCGGACTAGCCCCTTCGACGAAAACCCTTCTCGGCGATAACAAAGACAACAAAGCGGCCAGACCTACGGTTCAACAAACGAAAACAACTCCGACAAAAGCAAATATTACGAAGAACTCTAGGTCGAACTCTAAAGATAGTCTGGCCGAGGACAATGTCAGTCAAAGCTCACTAAGCGGCGGAATAAAGGGGAAGCTCGTGGCTTTATTCAGCAAAGAGCAAACGATAAGCGAGACGTCTATAGCTAATAAGTTCAGGCTGGAAAGAGAGAGGGATATGGAGATGTTGCAGAATAGATTCCCTTTTAAGGCACCTCCTCCCAGGAAACCTGAGCAAAATGATTCAGATGACGATCAGAGTGAGCAGGATCCATCTGAGAAAGCCCCCTTAATGGGAAGCACTACATCTCTGGCTCATAAAAAACCGGAAGTAATAGCCAATATACCTAAAGTGACGTTCGAAGAAAAGACGAAAGAACAAAATGGAGACGTCGTAGACAGAGAAGGAGACAAAGACGCCGAGAAGATTGTTGGTTCTCAACCGGTTAAAAGGAGAAACTCTCAAGACTCGCCTGCCGTCGTGTCGGTACTAGAGGATGTAAAGAGGATCAAAGTGAACAATAACAAACAAGCGAACGGGCACGCCAATGGCGCCGTCACGCAACAGCCCGGCCTGTACCCGCATTTATCGGATATAGAGACCGACAACTCAGGACACGAGGAGTACTCCGACTGCGGTGGCTCGAGCACAGAAGATGTACAAGAGAAAGAGATTGACAAACTCAATAAATCTGATGATTGGGCTGAAACTTCTTTCGGACGAGACGTGATGAACGTAGTGAAGAAGAATAACACGAGCTACAGAAAGGCGGTCCGACAGAGCGACTCTGAAAGCTCTCAAGGTGCTTGCGACAGTGAGCTAGACGATATGTTAGATGAAGCCTTGGGCGAGGAGGCGGAAGGTCCGACACCACCCAAGGTGAACAAGCACGGCAGCATGTCCTCGAGCAGTTTCGTTTATCAAGAGAAGTCAAAGTTCACGTCGCCGCTGAAGGCGCAGCCCGGCACGCCGGCGCCCCGACACGACAAGGGCTCCGAACTCGTCCACAGCGTCAGCTTCTATAGGAGGATGCAGAATTCCTCGTCGACTCCATCTACACCGCTTCGTGTAATAAGGCACGCGTCCCCGGAGCGCGGGGTGCCGCCCTCCAGCCCCGAGGAGCCCGCTGCGGCCGTCACGGTCAGGCAGCGCATCAAGGAGCTGCAGAACGAGATCACCAAGCAACAGACCGTTATATCGCAGGCGAGTCAAGCTTTGAATCTGTGTGCCGCGACCATAGAGTTCAGCGGTTCCACGGAGCAGGCCGAGGGCGAAAGGCTTCTGCTCTTGGCCACGCACCGTCGGCAGGCGTGTCTGCACGAGATGCAGCGGCTGCAGGTGGAGGGCGCGGGCCCGGCCGCCGCCGCGGGGCTGGCCTCGCTCTCCGTCGCGGCGCTCAACGTGCCGCTGCGCCGGGACTACGTGCGCCAGCTCAACGCCGATGGCGCCGTCGGGCATCACGCCGTGTGTCTGCTGAAATGTCGGGACAGAGTTCTGGCGACCAGCATGCAGCAAACTAAACCAACAAACAACACTATACATTTCCCCGATGAAATCAAAATGCTCGGACTCTCTAGCGATTTTAAGGTGACAGTGGAAGTTTATTTATTGCAAGCATCCAAAGAAATGTTGCCACACGATGTCAAATATCATATTTTCAACAAAAAGTCGAGTTCAAAGCTCTTAACGCCGAAGTCGAAAGTGTCGGAGCTGAAAGCGCCCCGCGTGCAGAGTCCGGGCGGGCCGCACACTGTCCGCACGCCGCAGTTCCAGCTGCACGGCTACTGCATCTTTGCGCTGCAGCAGGCCTCCAGGACCAGCTTCACTTTGAATAAGGTCCCTATGGGCAGTCCGCTGGAGGGCTCGGTGTGCGTGGAGGTGCGCGCGCGCGTGGCCGTGCCGCCCCCCGCGCCGCACGCCGCCTTCCTCACCGCCTTCGATGACGTCAGCGGGCTGGGCGCCTGGCACCGCCGCTGGTTCCGCCTGCAGACGCCCCGCCTGGCCTACTGGAAGTACCCTGACGATGTCCACAAGAAGATGCCTATAGGAGACATAGATCTGACGACGGTGACGTCAGAGCGCGCGGTGAGGGCGTCGCGCGACCTGTGCGCCCGCCCCAACACGCTGCTGCTGGAGTGCTCGATCCCGCCCGGCCTCATCGTGCCGGACAGCGGCTCGCTGGTGTACGTGCAGCGGGGCGGCCAGCTGCTGCGGCGGCACCTGCTGTCCGCGGACACGCCACAGGACCGCGACACGTGGATACGCTGCATCAACCAAGCCCTGGAGTACGTGCGGTGCTGCTCCAACGAGGACGACGACTGA
Protein
MDPFTQRMLERARARQEKIDQKLANSGQTVPKRKPLAENLCVSKSVSAPGKSPIKPARESITSPRKSLKAETPVKSGPKRNSTQKSDQTLVTSPLRPRNDVVVTKKEFKSPRKGSLTRRNSDVSVEINISHRNDIQIEVQVEERDTPISVVYDSQADRQSSVVIKEIEEDTSKELVKKSIVMSNSKDDKSGLRHNMKSRLDRLGNLYSDKPELSSPIHRTESEFTSATPPSEFEVKSKQTKPQDGKKKFGRLAALADQINTWEDDLTHHSFQPEPNKKTANNFKSKKLEDSTLDVSIHSIKDIDKALKVTQNKKTSHYTSNKTSTKQVNECQRLKKQIVAELEPKRASTTPSATAAPAMATMVASAPPAKPTVSKKPSIKKYHAPTPPDKVLTDDECEMEKDKENNAVQENENEADDCIQTKNKPADERPGSGERGSPIVKRLAPKLNGNIDRSSVLGKAAMFEAGSPKAKEKDPAEMSLRERKALFEKNKGTAIIPKAPFGLAPSTKTLLGDNKDNKAARPTVQQTKTTPTKANITKNSRSNSKDSLAEDNVSQSSLSGGIKGKLVALFSKEQTISETSIANKFRLERERDMEMLQNRFPFKAPPPRKPEQNDSDDDQSEQDPSEKAPLMGSTTSLAHKKPEVIANIPKVTFEEKTKEQNGDVVDREGDKDAEKIVGSQPVKRRNSQDSPAVVSVLEDVKRIKVNNNKQANGHANGAVTQQPGLYPHLSDIETDNSGHEEYSDCGGSSTEDVQEKEIDKLNKSDDWAETSFGRDVMNVVKKNNTSYRKAVRQSDSESSQGACDSELDDMLDEALGEEAEGPTPPKVNKHGSMSSSSFVYQEKSKFTSPLKAQPGTPAPRHDKGSELVHSVSFYRRMQNSSSTPSTPLRVIRHASPERGVPPSSPEEPAAAVTVRQRIKELQNEITKQQTVISQASQALNLCAATIEFSGSTEQAEGERLLLLATHRRQACLHEMQRLQVEGAGPAAAAGLASLSVAALNVPLRRDYVRQLNADGAVGHHAVCLLKCRDRVLATSMQQTKPTNNTIHFPDEIKMLGLSSDFKVTVEVYLLQASKEMLPHDVKYHIFNKKSSSKLLTPKSKVSELKAPRVQSPGGPHTVRTPQFQLHGYCIFALQQASRTSFTLNKVPMGSPLEGSVCVEVRARVAVPPPAPHAAFLTAFDDVSGLGAWHRRWFRLQTPRLAYWKYPDDVHKKMPIGDIDLTTVTSERAVRASRDLCARPNTLLLECSIPPGLIVPDSGSLVYVQRGGQLLRRHLLSADTPQDRDTWIRCINQALEYVRCCSNEDDD

Summary

Uniprot
A0A0N1IQA5   A0A194Q733   A0A088AKV5   A0A2A3ERF0   A0A0L7RG33   A0A336K2E0   + More
A0A3B0J352   A0A3B0JXB4   A0A182PM21   A0A182TP99   A0A182WXW8   A0A182I5Y9   Q7PRK2   A0A182KV27   A0A182RW81   A0A182UTB0   A0A182WE51  
Pubmed
26354079    12364791    20966253   
EMBL
KQ459838    KPJ19710.1    KQ459460    KPJ00810.1    KZ288195    PBC33786.1    + More
KQ414599    KOC69784.1    UFQS01000052    UFQT01000052    SSW98651.1    SSX19037.1    OUUW01000001    SPP75727.1    SPP75728.1    APCN01003537    AAAB01008848    EAA07071.5   
Proteomes
UP000053240    UP000053268    UP000005203    UP000242457    UP000053825    UP000268350    + More
UP000075885    UP000075902    UP000076407    UP000075840    UP000007062    UP000075882    UP000075900    UP000075903    UP000075920   
Pfam
PF00169   PH        + More
PF16018   Anillin_N
PF08174   Anillin
Interpro
IPR012966   AHD        + More
IPR001849   PH_domain       
IPR031970   Anillin_N       
IPR011993   PH-like_dom_sf       
IPR037840   PH_Anillin       
Gene 3D
2.30.29.30    
CDD
cd01263  PH_anillin
ProteinModelPortal
A0A0N1IQA5   A0A194Q733   A0A088AKV5   A0A2A3ERF0   A0A0L7RG33   A0A336K2E0   + More
A0A3B0J352   A0A3B0JXB4   A0A182PM21   A0A182TP99   A0A182WXW8   A0A182I5Y9   Q7PRK2   A0A182KV27   A0A182RW81   A0A182UTB0   A0A182WE51  
PDB
4XH3     E-value=1.04151e-41,     Score=433

Ontologies

KEGG
101744749    K18621 actin-binding protein anillin | (RefSeq) actin-binding protein anillin-like
GO
GO:0031106   GO:0030865   GO:1904498   GO:0017049   GO:0005826   GO:0000281   GO:0000915  

Topology

Length:
1306
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0890200000000001
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00000
outside
1  -  1306
 
 

Population Genetic Test Statistics

Pi
214.954561
Theta
161.537948
Tajima's D
0.761122
CLR
0.400837
CSRT
0.587270636468177
Interpretation
Uncertain
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