Gene

KWMTBOMO12094  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004276

Annotation

mitochondrial_phosphoenolpyruvate_carboxykinase_isoform_2_[Bombyx_mori]

Location

Bomo_Chr20(-):7164755-7201495      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.458

CDS

ATGGTGTTTTTTATAAAGAGCGTTACGAAGAGATGTGCTCAAGTGGCGATTGGATGCAGCCGCGCTGCCCACCAAACTGCTCTGCGAGGGTCGACGAAGCCTTCCCCACAGCTGGCCACTCTTACTCCAAAGGTCCGCGCGTTCGTGGAGCGCAGCGCTGCTCTGTGCCAGCCGGAGCACGTGCACGTGTGCGACGGCTCCGAGACAGAGGCGAGGGCGCTGCTACAGCTGATGCAGCAGCAGACCACCCTCAAACGACTGCCCCAATACGATAACTGTTGGTTGGCCCGGACAGACCCGGCAGACGTTGCCCGGGTTGAATCCCGCACGTTCATATGCTCCGATCGGGAGAGCGACGTGGTCCCCTCGGCTCGCGCCGGCCAGAAGTCCGCCCTGGGGAACTACATCTCCCCCCCGGATTACGAGAAGGCCGTGTCCGACAGATTCCCTGGTTGTATGAAAGGACGCACAATGTACGTGATACCATTCTCGATGGGTCCTGTGGGATCTCCTCTCTCGAAGATCGGCGTAGAAATCACGGATTCGCCTTACGTGGTTTATTCTATGCGAGTCATGACTAGAATTGGAGCGAAGGTTCTAGAAATTCTACGTCAAGACGAGCAGTTCGTTCGTTGTCTTCACGCAGTCGGCTCCGGTGGCACTCCGGGTTGGCCCTGCGACCCTAAGAACACCATCATACTCCACAAGCCGGCTGAGAACGAGATCGTAAGCTACGGCAGTGGATACGGCGGCAATAGTTTGTTGGGCAAGAAGTGCTTCGCTCTACGTCTGGGATCAGTGATCGCTCGTCGCGAAGGATGGCTGGCCGAACATATGCTTATCGTCGGCATAACCAACCCTCAAGGTAAGAAGCGCTACATCGCTGCCGCTTTTCCTTCAGCTTGCGGGAAAACGAACCTTGCCATGATGACGCCAACACTGCCCGGGTACAAAGTAGAGTGCGTGGGGGACGACATAGCCTGGATGAAGTTCGACAAGGACGGCGTACTCCGGGCCATTAACCCGGAAAACGGGTTCTTTGGAGTTGCACCAGGTACGTCAGCCGCTACGAATCCGATAGCAATGGCGACGGTGTTCAAAAACACCGTGTTCACTAACGTGGCGGAAACACCTGAGGGTGGGGTGTGGTGGGAAGGCATGGGACCAGCTCCGGAGCGCCTCGTCGACTGGAAAGGTCAACCCTGGGACCCCAGCAAGAAAACTCCGGCTGCACATCCAAATTCCAGATTCTGCACCCCGGCAGAGCAGTGTCCCATGATAGACGGTGAGTGGGAGAGCTCGGAGGGTGTGCCGATATCCGCCATCCTGCTGGGCGGCAGACGGCCGGCCGGCGTACCGCTCGTAGTCGAGTCGCGGGACTGGCAGCACGGCGTGTTCATGGGAGCTTCCATGAGGTCCGAGGCCACGGCCGCCGCCGAACACAGCGGTAAAATGGTGATGCACGATCCGTTTGCGATGCGTCCGTTCTTCGGCTACAACTTCGGCGACTACCTGAAGCACTGGCTGTCGATGCCGCAGCCTGGACGAAACATGCCCAAGATCTTCCACGTCAACTGGTTCCGTAAAGATGAACAGGGTAAGTTCCTCTGGCCCGGTTTCGGCGAGAACTCTCGGGTCTTAGACTGGATCTTGCGTCGCTGCGACGGGGAGCCCTGCCACGCCGAGACTCCACTGGGGTACATACCGAGAGCCGGTGCTCTGAATACGGAAAACCTAAGCGCTGTCGACATGAACGAGCTGTTCAGCATACCTAAAGACTTTTGGCTGCAGGAGTCTGACGCCATCGAGAAGTACTTCAAAGAGGAGGTAGGCGAAGATCTACCCAACGAAATGTGGGACGAATTGAACAAGTTGAGGAAGAACATACAAGCCTAA

Protein

MVFFIKSVTKRCAQVAIGCSRAAHQTALRGSTKPSPQLATLTPKVRAFVERSAALCQPEHVHVCDGSETEARALLQLMQQQTTLKRLPQYDNCWLARTDPADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPDYEKAVSDRFPGCMKGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVYSMRVMTRIGAKVLEILRQDEQFVRCLHAVGSGGTPGWPCDPKNTIILHKPAENEIVSYGSGYGGNSLLGKKCFALRLGSVIARREGWLAEHMLIVGITNPQGKKRYIAAAFPSACGKTNLAMMTPTLPGYKVECVGDDIAWMKFDKDGVLRAINPENGFFGVAPGTSAATNPIAMATVFKNTVFTNVAETPEGGVWWEGMGPAPERLVDWKGQPWDPSKKTPAAHPNSRFCTPAEQCPMIDGEWESSEGVPISAILLGGRRPAGVPLVVESRDWQHGVFMGASMRSEATAAAEHSGKMVMHDPFAMRPFFGYNFGDYLKHWLSMPQPGRNMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDWILRRCDGEPCHAETPLGYIPRAGALNTENLSAVDMNELFSIPKDFWLQESDAIEKYFKEEVGEDLPNEMWDELNKLRKNIQA

Uniprot

Q1HPM2   H9J437   Q1HPM3   H9J438   A0A194Q5I7   A0A2A4JV17   + More
I3RRT2   A0A2W1BH75   A0A212ESQ8   A0A2H1WWQ9   A0A3S2M622   L7WB29   L7WB19   L7WIQ3   L7WFJ8   L7WF42   L7WFJ0   L7WFJ4   L7WIP8   L7WIQ6   L7WIN5   L7WF37   L7WFZ9   L7WF49   L7WFI6   L7WFI4   L7WFY7   L7WF54   L7WF45   L7WB16   L7WIP0   L7WG10   L7WB24   L7WB31   L7WFZ1   L7WIP4   L7WIR1   L7WB37   L7WFK3   L7WF29   L7WF32   L7WFZ6   L7WFH5   L7WG04   L7WIK3   L7WFY2   L7WF17   L7WFW7   L7WIM6   L7WFG1   L7WF03   L7WF22   L7WIL7   L7WF12   L7WIM2   L7WAZ0   L7WIL2   L7WFX6   L7WFI0   L7WFW4   L7WB06   L7WFX9   L7WEZ8   L7WFX2   L7WFW1   L7WFE8   L7WB13   L7WFF1   L7WIN0   L7WFG5   L7WAY5   L7WIK8   L7WF24   L7WFV7   L7WFG7   L7WIL5   L7WFF7   L7WAZ6   L7WF08   L7WB09   L7WB01   L7WB40   L7WFH2   Q1HPM0   Q1HPM1   A0A1L8E134   A0A1W5YLK7   V5GVD1   A0A3G4S953   A0A139WEA4   D6WPH9   A0A2Z5RE47   A0A2J7PSG2   D3TQU4   J3JXL1   A0A1B0A7D8   A0A0M4EC11   A0A0L0BSV4   A0A1A9VXH2   A0A0A1WGW1  

Pubmed

19121390    26354079    28756777    22118469    23311980    30392850    + More
18362917    19820115    26760975    20353571    22516182    26108605    25830018   

EMBL

DQ443380    ABF51469.1    BABH01032627    DQ443379    ABF51468.1    BABH01032622    + More
BABH01032623    BABH01032624    BABH01032625    KQ459460    KPJ00812.1    NWSH01000561    PCG75649.1    JQ730685    AFK28502.1    KZ150212    PZC72166.1    AGBW02012739    OWR44517.1    ODYU01011631    SOQ57498.1    RSAL01000029    RVE51794.1    KC409335    AGC79089.1    KC409325    AGC79079.1    KC409343    AGC79097.1    KC409349    AGC79103.1    KC409337    AGC79091.1    KC409339    AGC79093.1    KC409344    AGC79098.1    KC409338    AGC79092.1    KC409348    AGC79102.1    KC409323    AGC79077.1    KC409332    AGC79086.1    KC409341    AGC79095.1    KC409347    AGC79101.1    KC409334    AGC79088.1    KC409329    AGC79083.1    KC409326    AGC79080.1    KC409352    AGC79106.1    KC409342    AGC79096.1    KC409320    AGC79074.1    KC409328    AGC79082.1    KC409351    AGC79105.1    KC409330    AGC79084.1    KC409340    AGC79094.1    KC409331    AGC79085.1    KC409333    AGC79087.1    KC409353    AGC79107.1    KC409345    AGC79099.1    KC409354    AGC79108.1    KC409322    AGC79076.1    KC409327    AGC79081.1    KC409336    AGC79090.1    KC409319    AGC79073.1    KC409346    AGC79100.1    KC404923    AGC79037.1    KC409321    AGC79075.1    KC404947    AGC79061.1    KC404941    AGC79055.1    KC404953    AGC79067.1    KC404939    AGC79053.1    KC404932    AGC79046.1    KC404952    AGC79066.1    KC404943    AGC79057.1    KC404942    AGC79056.1    KC404948    AGC79062.1    KC404930    AGC79044.1    KC404933    AGC79047.1    KC404951    AGC79065.1    KC409324    AGC79078.1    KC404936    AGC79050.1    KC404945    AGC79059.1    KC404956    AGC79070.1    KC404927    AGC79041.1    KC404946    AGC79060.1    KC404931    AGC79045.1    KC404924    AGC79038.1    KC404955    AGC79069.1    KC404929    AGC79043.1    KC404958    AGC79072.1    KC404944    AGC79058.1    KC404925    AGC79039.1    KC404928    AGC79042.1    KC404957    AGC79071.1    KC404926    AGC79040.1    KC404949    AGC79063.1    KC404938    AGC79052.1    KC404934    AGC79048.1    KC404935    AGC79049.1    KC404937    AGC79051.1    KC404950    AGC79064.1    KC404940    AGC79054.1    KC409350    AGC79104.1    KC404954    AGC79068.1    DQ443382    ABF51471.1    DQ443381    ABF51470.1    GFDF01001879    JAV12205.1    KX147668    ARI45072.1    GALX01004273    JAB64193.1    MH509395    AYU75340.1    KQ971354    KYB26254.1    EFA06223.2    FX983740    BAX07239.1    NEVH01021928    PNF19275.1    CCAG010009432    EZ423796    ADD20072.1    BT127980    AEE62942.1    CP012524    ALC41177.1    JRES01001421    KNC23063.1    GBXI01016644    JAC97647.1   

Proteomes

UP000005204    UP000053268    UP000218220    UP000007151    UP000283053    UP000007266    + More
UP000235965    UP000092444    UP000092445    UP000092553    UP000037069    UP000078200   

PRIDE

Q1HPM2    H9J437    Q1HPM3    H9J438    Q1HPM0    Q1HPM1    + More

Pfam

PF17297   PEPCK_N        + More
PF00821   PEPCK_GTP

Interpro

IPR035077   PEP_carboxykinase_GTP_C        + More
IPR035078   PEP_carboxykinase_GTP_N       
IPR008210   PEP_carboxykinase_N       
IPR013035   PEP_carboxykinase_C       
IPR018091   PEP_carboxykin_GTP_CS       
IPR008209   PEP_carboxykinase_GTP       

SUPFAM

SSF68923   SSF68923       

Gene 3D

3.40.449.10     3.90.228.20    

CDD

cd00819  PEPCK_GTP

ProteinModelPortal

Q1HPM2   H9J437   Q1HPM3   H9J438   A0A194Q5I7   A0A2A4JV17   + More
I3RRT2   A0A2W1BH75   A0A212ESQ8   A0A2H1WWQ9   A0A3S2M622   L7WB29   L7WB19   L7WIQ3   L7WFJ8   L7WF42   L7WFJ0   L7WFJ4   L7WIP8   L7WIQ6   L7WIN5   L7WF37   L7WFZ9   L7WF49   L7WFI6   L7WFI4   L7WFY7   L7WF54   L7WF45   L7WB16   L7WIP0   L7WG10   L7WB24   L7WB31   L7WFZ1   L7WIP4   L7WIR1   L7WB37   L7WFK3   L7WF29   L7WF32   L7WFZ6   L7WFH5   L7WG04   L7WIK3   L7WFY2   L7WF17   L7WFW7   L7WIM6   L7WFG1   L7WF03   L7WF22   L7WIL7   L7WF12   L7WIM2   L7WAZ0   L7WIL2   L7WFX6   L7WFI0   L7WFW4   L7WB06   L7WFX9   L7WEZ8   L7WFX2   L7WFW1   L7WFE8   L7WB13   L7WFF1   L7WIN0   L7WFG5   L7WAY5   L7WIK8   L7WF24   L7WFV7   L7WFG7   L7WIL5   L7WFF7   L7WAZ6   L7WF08   L7WB09   L7WB01   L7WB40   L7WFH2   Q1HPM0   Q1HPM1   A0A1L8E134   A0A1W5YLK7   V5GVD1   A0A3G4S953   A0A139WEA4   D6WPH9   A0A2Z5RE47   A0A2J7PSG2   D3TQU4   J3JXL1   A0A1B0A7D8   A0A0M4EC11   A0A0L0BSV4   A0A1A9VXH2   A0A0A1WGW1  

PDB

2GMV     E-value=0,     Score=1969

KEGG

733130    K01596 phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] | (RefSeq) mitochondrial phosphoenolpyr

PATHWAY

00010    Glycolysis / Gluconeogenesis - Bombyx mori (domestic silkworm)
00020    Citrate cycle (TCA cycle) - Bombyx mori (domestic silkworm)
00620    Pyruvate metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
04068    FoxO signaling pathway - Bombyx mori (domestic silkworm)

GO

GO:0005525   GO:0006094   GO:0016301   GO:0004613   GO:0071333   GO:0033993   GO:0006090   GO:0030145   GO:0046327   GO:0042594   GO:0005829   GO:0019543   GO:0004611   GO:0017076   GO:0000049   GO:0000287   GO:0008033   GO:0003676   GO:0016787  

PANTHER

PTHR11561  

Length:

631

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01518

Exp number, first 60 AAs:

0.00013

Total prob of N-in:

0.00104

outside

1  -  631

 

 

Pi

200.134502

Theta

151.920233

Tajima's D

0.8043

CLR

0.255913

CSRT

0.60321983900805

Interpretation

Uncertain