Gene

KWMTBOMO12089  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004337

Annotation

PREDICTED:_stromal_membrane-associated_protein_1_[Papilio_machaon]

Location

Bomo_Chr20(+):7099366-7111047      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.321

CDS

ATGACGTCTAAAAGTGAAAAAGATCGTGCTAAACAAATACAGGATCGTTGTCAGAATATATTAGTGCAAATGCTTAAAGATGAAGACAACAAATACTGCGTTGACTGTGATGCAAAAGGTCCACGATGGGCTTCATGGAATTTGGGTATATTCCTGTGCATCCGCTGCGCTGGGATCCATCGGAATCTGGGTGTTCACATCTCCAAAGTGAAGAGTGTCAATCTCGATTCGTGGACTCCAGAGCAAGTGGTGTCGCTACAGCAAATGGGAAACAGCCGCGCCCGGGCCGTGTACGAGGCGAACTTACCAGACTCGTTCAGACGTCCACAAAACGACATGTCCTTGGAATCGTTCATACGCGCCAAATACGAACAGAAGAAATACATTGCGAAGGAGTGGGTGCCCCCGCAGCTGCCCAAAGTCAACTGGGATAAAGAAATAGACGAAGAGATGGATCGACAGAAAAGGAAAAAGAAGTCGGCGACGTCATCGCTCGGACCCCTGCCGGCCCCCGCTGTTGCTGATAAGAAATATAATAAGTCCGACGTGATACCGAGCATACCGAAACCAAAATCTTCAGTCAGTCCTAAGCTCGGTAGGAGCACGCCTCCCGCACACCCGGACACCAGCAAAACGTCCAACGGCTCCGCAGATCTCCTCGGCTTGGACACCGCCAAACCGGACCCCGTGCCCAGCAACGACGACATCTTCTCCAGTTTCTTTTCGGCGCCACAAGAGCGACCAGCCGAGCCGGTCAAGAACGATATCAGCAACGACTTGAAGGTCGAGGAGGAGAACTTCTTCAAGCAACCAGCGCCCTCAGAGAAGGAGAAGTCTAAGCTGACTAAGGACAGCATCTTGGCGTTGTACAGTCAAACGCCGGTGGGAGCTCAGTTTCAGGCGCCGAGCTACCAGTACCCGTCGAATGCTGCTCCGCAAGGGTACTGCGCGATGCCGCAAGCCAGCACCATGCCGTACAACTACCAGCAACCCTTCGCGGCGCCGACCCAGCAACCATTGCAACCACCGTTTGCCAACAGCCAACTCTTCAGCCAACCTCAGCAGACGCAGCCAATCCAACAGCAGTTCGCCAATTTGAACTTGGGACAGGGTTTTCCTAATGCATTCACGCAACAAAACGCGAACTTCGCAAGCAATACATCGTGGCAGTAA

Protein

MTSKSEKDRAKQIQDRCQNILVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVKSVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYEQKKYIAKEWVPPQLPKVNWDKEIDEEMDRQKRKKKSATSSLGPLPAPAVADKKYNKSDVIPSIPKPKSSVSPKLGRSTPPAHPDTSKTSNGSADLLGLDTAKPDPVPSNDDIFSSFFSAPQERPAEPVKNDISNDLKVEEENFFKQPAPSEKEKSKLTKDSILALYSQTPVGAQFQAPSYQYPSNAAPQGYCAMPQASTMPYNYQQPFAAPTQQPLQPPFANSQLFSQPQQTQPIQQQFANLNLGQGFPNAFTQQNANFASNTSWQ

Uniprot

H9J498   A0A2A4JUE2   A0A0N1PHH2   A0A194QBK3   A0A212ESU7   A0A026WY63   + More
E2B1A8   A0A0J7KIP9   A0A195DXE2   A0A0C9RJN1   A0A232EY52   F4WSR2   K7IQQ6   A0A195FNI9   A0A158NGZ8   A0A151IDE8   A0A151XD91   A0A2J7R0X1   A0A2J7R0X4   A0A2P8XWI5   A0A310SYB7   A0A2J7R0Y2   A0A2J7R0Y1   A0A2W1B9A2   A0A0L7RDL6   A0A2A3EMW7   A0A154PQC9   A0A195B784   A0A0M8ZVN8   A0A088ADM6   A0A1Y1N2Z3   A0A1Y1N2X9   A0A067RKA1   E2C4J0   E9IQH4   A0A0C9QX87   A0A0K8TB35   A0A146M6K8   D6WRH8   A0A1B6MAI2   R4G5J7   A0A0P4VQ62   A0A069DSW3   A0A224XQ24   A0A0V0G6B6   A0A023F8Q6   A0A0K8V9N0   B3MIA7   A0A034W4S9   A0A1A9UVJ7   A0A1B0BX78   B4GCU6   A0A1A9XID8   A0A0L0C5U7   A0A1B6D4X7   A0A1B0AG78   B4KTQ1   Q28Y83   A0A0J9R8E6   A1Z7K6   Q8SWV3   A0A0A1XGJ1   A0A0R3NV94   Q0IG44   A0A0R3NNY7   B4P3E5   A0A0R3NPC5   A0A0P6FM24   A0A1L8DL46   W8BUD6   A0A0P5HCD1   A0A1L8DLG9   E9HY46   A0A1Q3F7I7   A0A0N8DJ12   B3N842   A0A0P5NX43   A0A1I8PB74   A0A1L8DL99   A0A0P5YK14   A0A3B0JMN9   A0A0P4ZPM8   A0A1L8DL71   B0WI04   A0A182GAW2   A0A1Q3F7D5   A0A1Q3F7H9   A0A1W4WF70   A0A0P5UB73   B4LNP1   B4QGN5   T1PDQ7   A0A2S2Q411   A0A0P6HCV2   A0A1E1XK78   A0A0M4EEW0   A0A1W4UJY7   V5I7Y0  

Pubmed

19121390    26354079    22118469    24508170    20798317    28648823    + More
21719571    20075255    21347285    29403074    28756777    28004739    24845553    21282665    26823975    18362917    19820115    27129103    26334808    25474469    17994087    25348373    26108605    18057021    15632085    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25830018    17510324    17550304    24495485    21292972    26483478    25315136    29209593   

EMBL

BABH01032619    BABH01032620    NWSH01000561    PCG75645.1    KQ459838    KPJ19704.1    + More
KQ459460    KPJ00816.1    AGBW02012739    OWR44521.1    KK107063    EZA61010.1    GL444841    EFN60508.1    LBMM01006997    KMQ90127.1    KQ980204    KYN17279.1    GBYB01006923    GBYB01008405    GBYB01008406    JAG76690.1    JAG78172.1    JAG78173.1    NNAY01001691    OXU23209.1    GL888327    EGI62719.1    KQ981387    KYN41991.1    ADTU01015412    ADTU01015413    KQ977971    KYM98412.1    KQ982294    KYQ58323.1    NEVH01008216    PNF34483.1    PNF34484.1    PYGN01001240    PSN36368.1    KQ759820    OAD62744.1    PNF34485.1    PNF34486.1    KZ150212    PZC72162.1    KQ414613    KOC69082.1    KZ288206    PBC33105.1    KQ435037    KZC14125.1    KQ976574    KYM80117.1    KQ435824    KOX72075.1    GEZM01013967    JAV92244.1    GEZM01013968    JAV92243.1    KK852423    KDR24237.1    GL452489    EFN77131.1    GL764790    EFZ17180.1    GBYB01008404    JAG78171.1    GBRD01003210    JAG62611.1    GDHC01004419    JAQ14210.1    KQ971351    EFA06570.2    GEBQ01007034    JAT32943.1    GAHY01000490    JAA77020.1    GDKW01002640    JAI53955.1    GBGD01001706    JAC87183.1    GFTR01005876    JAW10550.1    GECL01002575    JAP03549.1    GBBI01000942    JAC17770.1    GDHF01016791    JAI35523.1    CH902619    EDV35952.1    GAKP01009645    JAC49307.1    JXJN01022118    CH479181    EDW32509.1    JRES01000848    KNC27768.1    GEDC01016595    JAS20703.1    CH933808    EDW09634.1    KRG04778.1    CM000071    EAL26082.2    CM002911    KMY92377.1    AE013599    BT133474    AAM71092.1    AFH97164.1    AY095063    AAM11391.1    GBXI01003788    JAD10504.1    KRT02816.1    CH477274    EAT45167.1    KRT02817.1    CM000157    EDW89418.1    KRT02818.1    GDIQ01046177    JAN48560.1    GFDF01006895    JAV07189.1    GAMC01003738    JAC02818.1    GDIQ01229604    JAK22121.1    GFDF01006894    JAV07190.1    GL733109    EFX63334.1    GFDL01011572    JAV23473.1    GDIP01028951    JAM74764.1    CH954177    EDV59455.1    GDIQ01136485    JAL15241.1    GFDF01006893    JAV07191.1    GDIP01056844    LRGB01000248    JAM46871.1    KZS20017.1    OUUW01000001    SPP73881.1    GDIP01222990    JAJ00412.1    GFDF01006892    JAV07192.1    DS231941    EDS28086.1    JXUM01156941    KQ572609    KXJ68016.1    GFDL01011564    JAV23481.1    GFDL01011582    JAV23463.1    GDIP01119196    JAL84518.1    CH940648    EDW60111.1    CM000362    EDX06260.1    KA646886    AFP61515.1    GGMS01003265    MBY72468.1    GDIQ01021341    JAN73396.1    GFAA01003811    JAT99623.1    CP012524    ALC40635.1    GALX01005650    JAB62816.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000053097    + More
UP000000311    UP000036403    UP000078492    UP000215335    UP000007755    UP000002358    UP000078541    UP000005205    UP000078542    UP000075809    UP000235965    UP000245037    UP000053825    UP000242457    UP000076502    UP000078540    UP000053105    UP000005203    UP000027135    UP000008237    UP000007266    UP000007801    UP000078200    UP000092460    UP000008744    UP000092443    UP000037069    UP000092445    UP000009192    UP000001819    UP000000803    UP000008820    UP000002282    UP000000305    UP000008711    UP000095300    UP000076858    UP000268350    UP000002320    UP000069940    UP000249989    UP000192223    UP000008792    UP000000304    UP000095301    UP000092553    UP000192221   

PRIDE

H9J498    A1Z7K6    Q8SWV3   

Pfam

PF01412   ArfGap

Interpro

IPR038508   ArfGAP_dom_sf        + More
IPR001164   ArfGAP_dom       
IPR037278   ARFGAP/RecO       

SUPFAM

SSF57863   SSF57863       

Gene 3D

3.30.40.160    

ProteinModelPortal

H9J498   A0A2A4JUE2   A0A0N1PHH2   A0A194QBK3   A0A212ESU7   A0A026WY63   + More
E2B1A8   A0A0J7KIP9   A0A195DXE2   A0A0C9RJN1   A0A232EY52   F4WSR2   K7IQQ6   A0A195FNI9   A0A158NGZ8   A0A151IDE8   A0A151XD91   A0A2J7R0X1   A0A2J7R0X4   A0A2P8XWI5   A0A310SYB7   A0A2J7R0Y2   A0A2J7R0Y1   A0A2W1B9A2   A0A0L7RDL6   A0A2A3EMW7   A0A154PQC9   A0A195B784   A0A0M8ZVN8   A0A088ADM6   A0A1Y1N2Z3   A0A1Y1N2X9   A0A067RKA1   E2C4J0   E9IQH4   A0A0C9QX87   A0A0K8TB35   A0A146M6K8   D6WRH8   A0A1B6MAI2   R4G5J7   A0A0P4VQ62   A0A069DSW3   A0A224XQ24   A0A0V0G6B6   A0A023F8Q6   A0A0K8V9N0   B3MIA7   A0A034W4S9   A0A1A9UVJ7   A0A1B0BX78   B4GCU6   A0A1A9XID8   A0A0L0C5U7   A0A1B6D4X7   A0A1B0AG78   B4KTQ1   Q28Y83   A0A0J9R8E6   A1Z7K6   Q8SWV3   A0A0A1XGJ1   A0A0R3NV94   Q0IG44   A0A0R3NNY7   B4P3E5   A0A0R3NPC5   A0A0P6FM24   A0A1L8DL46   W8BUD6   A0A0P5HCD1   A0A1L8DLG9   E9HY46   A0A1Q3F7I7   A0A0N8DJ12   B3N842   A0A0P5NX43   A0A1I8PB74   A0A1L8DL99   A0A0P5YK14   A0A3B0JMN9   A0A0P4ZPM8   A0A1L8DL71   B0WI04   A0A182GAW2   A0A1Q3F7D5   A0A1Q3F7H9   A0A1W4WF70   A0A0P5UB73   B4LNP1   B4QGN5   T1PDQ7   A0A2S2Q411   A0A0P6HCV2   A0A1E1XK78   A0A0M4EEW0   A0A1W4UJY7   V5I7Y0  

PDB

2IQJ     E-value=1.83155e-45,     Score=460

KEGG

101740777    K12486 stromal membrane-associated protein | (RefSeq) stromal membrane-associated protein 1-like

PATHWAY

04144    Endocytosis - Bombyx mori (domestic silkworm)

GO

GO:0046872   GO:0005096   GO:0043087   GO:0005524   GO:0006468   GO:0005488   GO:0006432   GO:0000049   GO:0000287   GO:0008033   GO:0003676   GO:0016787  

Length:

390

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.19766

Exp number, first 60 AAs:

0.17064

Total prob of N-in:

0.05517

outside

1  -  390

 

 

Pi

177.325828

Theta

133.856147

Tajima's D

0.510099

CLR

0.000402

CSRT

0.520073996300185

Interpretation

Uncertain