Gene

KWMTBOMO12084

Pre Gene Modal

BGIBMGA004336

Annotation

ovary_C/EBPg_transcription_factor_[Bombyx_mori]

Location

Bomo_Chr20(+):7029596-7031330      View in EpiBrowser

Transcription factor

TF_bZIP

Location in the cell

Nuclear   Reliability : 3.597

CDS

ATGCCTCCTGTTAAAAGAGGGAAGCGTGGTGTTAGCGATGCTGATGATGAGGATGATGATTACAGAAAAAGACGAAACAGGAATAATGAGGCAGTAAAAAAAAGTAGATTCAAGTCTAAACAGCGCACGCAGGAAACATTCTCACGTGTCAGTAAATTGAAAGCCGAGAACCAAGTGCTCGAGGAGAAAGTAAAAACTTTATCAAAACAACTTCAGTTCCTGAAAGACTTGTTTTTTGCTCAAGCAAAGAAAGACACCACCGAATTGGAAGGTATCGACTTAAACAAGCTCTTTGAAGACTTACCAGACGATAGGGACACAAATGATAAATAG

Protein

MPPVKRGKRGVSDADDEDDDYRKRRNRNNEAVKKSRFKSKQRTQETFSRVSKLKAENQVLEEKVKTLSKQLQFLKDLFFAQAKKDTTELEGIDLNKLFEDLPDDRDTNDK

Uniprot

Q538A4   A0A2H1W683   A0A2A4JGH5   A0A2W1BAW1   A0A3S2PHS0   A0A1E1WT69   + More
A0A212ESP8   A0A194Q628   S4NXK3   A0A0L7KZ15   A0A0N1PHI3   A0A2A4JVY2   A0A2W1B9K7   A0A2H1VG12   A0A0L7LBY9   A0A1Y1L0C1   D6WSX1   A0A0C9QP07   E2BW33   C4WUT9   E2ARV5   B0WYA4   A0A2M4AW28   W5JXC3   A0A182FHS0   A0A336M1H7   A0A336KFB0   K1PYD5   A0A093GPU3   A0A091QKK7  

Pubmed

16288982    19121390    28756777    22118469    26354079    23622113    + More
26227816    28004739    18362917    19820115    20798317    20920257    23761445    22992520   

EMBL

BABH01032610    AY618900    AAV34567.1    ODYU01006577    SOQ48537.1    NWSH01001660    + More
PCG70513.1    KZ150392    PZC71044.1    RSAL01000029    RVE51800.1    GDQN01000890    GDQN01000562    JAT90164.1    JAT90492.1    AGBW02012739    OWR44523.1    KQ459460    KPJ00819.1    GAIX01014160    JAA78400.1    JTDY01004307    KOB68306.1    KQ459838    KPJ19702.1    NWSH01000561    PCG75643.1    PZC71045.1    ODYU01002346    SOQ39726.1    JTDY01001778    KOB72909.1    GEZM01068201    JAV67103.1    KQ971352    EFA06338.2    GBYB01002375    GBYB01002376    GBYB01002377    JAG72142.1    JAG72143.1    JAG72144.1    GL451091    EFN80065.1    ABLF02018435    AK341219    AK341220    BAH71659.1    GL442175    EFN63838.1    DS232186    EDS36981.1    GGFK01011672    MBW44993.1    ADMH02000012    ETN68089.1    UFQS01000392    UFQT01000392    SSX03535.1    SSX23900.1    SSX03534.1    SSX23899.1    JH818180    EKC24064.1    KL216302    KFV69062.1    KK702354    KFQ28090.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053268    UP000037510    + More
UP000053240    UP000007266    UP000008237    UP000007819    UP000000311    UP000002320    UP000000673    UP000069272    UP000005408    UP000053875   

PRIDE

Q538A4   

Pfam

PF07716   bZIP_2

Interpro

IPR004827   bZIP       

ProteinModelPortal

Q538A4   A0A2H1W683   A0A2A4JGH5   A0A2W1BAW1   A0A3S2PHS0   A0A1E1WT69   + More
A0A212ESP8   A0A194Q628   S4NXK3   A0A0L7KZ15   A0A0N1PHI3   A0A2A4JVY2   A0A2W1B9K7   A0A2H1VG12   A0A0L7LBY9   A0A1Y1L0C1   D6WSX1   A0A0C9QP07   E2BW33   C4WUT9   E2ARV5   B0WYA4   A0A2M4AW28   W5JXC3   A0A182FHS0   A0A336M1H7   A0A336KFB0   K1PYD5   A0A093GPU3   A0A091QKK7  

PDB

6MG2     E-value=0.0242851,     Score=81

KEGG

692649    K10049 CCAAT/enhancer binding protein (C/EBP), gamma | (RefSeq) C/EBPg; ovary C/EBPg transcription f

GO

GO:0003700   GO:0006355   GO:0043565   GO:0005737   GO:0006432   GO:0000049   GO:0000287   GO:0008033   GO:0003676   GO:0016787  

Length:

110

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.33770

outside

1  -  110

 

 

Pi

73.822339

Theta

147.876186

Tajima's D

-1.091505

CLR

182.949658

CSRT

0.12194390280486

Interpretation

Uncertain