SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12082
Pre Gene Modal
BGIBMGA004281
Annotation
PREDICTED:_uncharacterized_protein_LOC106135805_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 4.587
 

Sequence

CDS
ATGAGTCGACTTACGGCTAGCGTTCAGGCCGCCATAAGAACTTCTACGTCAAGGGGTCTGTCATACAGAGGTGCCAATTTCAATCGCTACACACCAATGGGCCAAAGGTCGTCGCGTTGTCCTGATAGAAGATATACAATATTTTGGCCTAAGGATCATGTCTCACCGAGACTACACCTTGCACAAACCAGTCACAACAACAAGGCTAAGAAAAATCCAAGGAAAACAGACAAAAGGGAATCGGAAAACGACTTCAAGGATATAAAAGAAGATATTTCCGAAACAAAAGATAATTCACAATTGGAGGCAACATCAACTTCACAGCAGAAAGATATTATAACAGACGACCAGATGCCTTCTACTAGTGCAGCAGTTAACCAAGCCGGCTTAAAAAAGAAACGCCTTTACAGTACAGTTCTAAGCACGAGTGCTCCTTCACCAATTACCTTGTCTCCAGTTGTGAGACTAGCACAAAAGCTAGTCACACCGGGTATTCTCAAGCTGAACCCGAAGATAATTCTGCCATCTGCTAGGGTTAGGCAGCCGCAATTGGAACATAAGTTTGAAGAGCTCGAAAAGGAAGCTCTTGAACAGTACAAAGCTTCAGATGAAAGCATCGACACTAAATTTCAGGAATTGGAAAAGCAAGCTGTGGAACAGTATAGCACGAGTGCCAGTAATACAAGCTGTAGCAGCGGAAATTCCGCTGAGAAACAAACGAATGCGGAAAAGGAGACGAAAGGGAAGACCGCAAAATTTCACAAACCAATCGAAAGTATTGTAGTTTATTCGCAAAATTTTCCGGACCTTTGCACGAGAAGCACTAGTATTACAAAGTTAAAAAACTTCCATAACCCCCCGAGGGGGGATAAAAAGGAGCACAGGAGCAAATCGTCACGACCGAAGACTGACAGTCAACGGGCAGCGTCAGACACGGACTACGAAGCTAGGGAGATGAACTCAAAAAACCACAAAAGTTCCATGAGGTGGTCCTTGCATGCGGTCCCACCAAAAAAGCGACATTTAACTTTTTGCGTTTCTGACTTTTCCTCTGACGATGAGCTGGACGACACCTGTTCCATTAAAGATGCCGGCCCTCGTATCAAATCTCATTTAGGGAAGATAAAAATTTCGGCGCATGGTGGTGGGGACCTCCATCCCATATTAAGGAAAATATAA
Protein
MSRLTASVQAAIRTSTSRGLSYRGANFNRYTPMGQRSSRCPDRRYTIFWPKDHVSPRLHLAQTSHNNKAKKNPRKTDKRESENDFKDIKEDISETKDNSQLEATSTSQQKDIITDDQMPSTSAAVNQAGLKKKRLYSTVLSTSAPSPITLSPVVRLAQKLVTPGILKLNPKIILPSARVRQPQLEHKFEELEKEALEQYKASDESIDTKFQELEKQAVEQYSTSASNTSCSSGNSAEKQTNAEKETKGKTAKFHKPIESIVVYSQNFPDLCTRSTSITKLKNFHNPPRGDKKEHRSKSSRPKTDSQRAASDTDYEAREMNSKNHKSSMRWSLHAVPPKKRHLTFCVSDFSSDDELDDTCSIKDAGPRIKSHLGKIKISAHGGGDLHPILRKI

Summary

Ontologies

GO

Topology

Length:
392
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0633
Exp number, first 60 AAs:
0.00013
Total prob of N-in:
0.01852
outside
1  -  392
 
 

Population Genetic Test Statistics

Pi
86.636237
Theta
155.861952
Tajima's D
-1.253224
CLR
1966.891684
CSRT
0.0919954002299885
Interpretation
Possibly Positive selection
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