Gene

KWMTBOMO12080

Pre Gene Modal

BGIBMGA004282

Annotation

PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_isoform_X4_[Bombyx_mori]

Location

Bomo_Chr20(-):6912349-6915386      View in EpiBrowser

Full name

PiggyBac transposable element-derived protein 4      

Location in the cell

Nuclear   Reliability : 2.421 PlasmaMembrane   Reliability : 1.744

CDS

ATGGAAAAAAATGTTGATTATGGTGCAAGCTGCGATTCAATTACAACAAAGAACAAGCGGCCTGTAAGTCCGAGCGTTGGCGATTCTAGCGCAAAAATTCGTCGACAACTAATGCCTTCGGTCAGTGGCAGATCCCATCGTGATTCTAAAATGGCCAATATACTTAATTATGGCAGCGAAGAAGAGTCTGACAAAGAGGAAGAAGGGATTACACAGCCATTAGGGGCGCCCCGGATGGCAAGGATGCTTATGGACGAAGAAGATGAGGAAGTTGAAAGAGGTTCTATCAACTTTACTTTGGAACGGCCTTCGCAACTACGTCGACCATCCATTAGTGTCTCGACGCCCGCCTCACCGACGCCTGTTTCGCCGACTCCCGTGGAGCCGAACAACAAATTTAAATTTGACTGGAGAGCGTTTCCAATGTCTCAATTTGAACCTCATTTGAGACGAGAACCGTTCTCGCAAATTAATTGTGGCCCTACAGTCTCATTCACGAATCCATACGAAGCTTTTATTTCCATATGGAATCGTGAAATTATGGATTTGATTGTTAGGGAGACCAACCTTTATTCACAGCAGCTGGCAACGACCATGCTGGAGAATGGGATGATCCGTCCTACAAGTCGCATCACTCGTTGGCATGATACGAATGTAGATGAACTTTACACATATTTTGCTATTATTCTGGCTATGAGTTTGGTAGTAAAAAGCCATGCAGAGGAGTACTGGAGCAACAATAACGATATTTTCAATACCCCCGGCTTCTCCACATATATGTCATACGATAGGTTTATGCTCATATCAAAATGTCTTCATTTTAGTAATAATGTTCATTATAACTCTGAATTGCTAACACAACCCCAAGATAAACTTTTTAAGATAAAACCCATTATAGACCACTTAAATTGCAAGTATTCTGAATTATTCATTCTATCACAAAATGTGACTCTCCATGAAAGCTTCACTATGAGGAAGGGTTTGCTTGACAATCAATTGATACCTAACAAGGGACCGACAATTGGAGTCAAGATATTTGAAGTCTGTGAGTCCAAGACGGGATATTTGTGGCGTTTTGAAGTGTACGTAGGCCATGATATCTCGGCGCTTCAAGAAGATAATCAAATTTCTGGAACAATACCATCTCTTGTACTCAGACTACTAAACGGTCTTGAACATAAAGGTCACACTGTATGGATGGACAATTTTTACAACTCCCCAGCACTAGCGCGGGAACTGAAAGTCCGGGGATTCGATTGTGCTGGAACACTTAGTACAAATCGTCAATTCGTACCATCTGAATTGGCGAATATATCCGAAAAGGACATGATAGTCGGTCAAGTGGTGGGTTGCACCTCGGAAGATGTGGACGTCATGGTGTGGAGGGATATCGGGAAGCGCGAGGCTTTTATTTCTACATACCATGGCGTCTCAAGTACCAGGTGTGGCGAAACACTGAATCCGTCTGTTGTGCTGGATTACAACACTTGTATGGGCGTTGTCGACCGCAAAGCCCACCAGCTTTCTATGTACCCCATCGAAAGGAAGTCGACCCAGGTCTGGTATAAAAAAATTTTTAGAAGGCTTTTGCACGCCAGTATCCTAAACGCACACATTTTACTAGGAAATCAATTATTGACGCACCGGAAATTCCGGAAGGCGTTGATAATTGATTTGTTATCAGCACACGGCACACGTATATCCATTTCAAAAACAATTACAAAGTTGCATACCCCGGCGCAGTACGACTTGATAAAGTCCGGAAAGACAGACCGATTAAAGCGTAAGTGCGCCGTCTGCGGGAAACGGACCATCACGTACTGCAAAGCATGCAACGTGGCAATGTGTCTTTTCACTTGCTACGAGCCATACCACAATTCACATTAA

Protein

MEKNVDYGASCDSITTKNKRPVSPSVGDSSAKIRRQLMPSVSGRSHRDSKMANILNYGSEEESDKEEEGITQPLGAPRMARMLMDEEDEEVERGSINFTLERPSQLRRPSISVSTPASPTPVSPTPVEPNNKFKFDWRAFPMSQFEPHLRREPFSQINCGPTVSFTNPYEAFISIWNREIMDLIVRETNLYSQQLATTMLENGMIRPTSRITRWHDTNVDELYTYFAIILAMSLVVKSHAEEYWSNNNDIFNTPGFSTYMSYDRFMLISKCLHFSNNVHYNSELLTQPQDKLFKIKPIIDHLNCKYSELFILSQNVTLHESFTMRKGLLDNQLIPNKGPTIGVKIFEVCESKTGYLWRFEVYVGHDISALQEDNQISGTIPSLVLRLLNGLEHKGHTVWMDNFYNSPALARELKVRGFDCAGTLSTNRQFVPSELANISEKDMIVGQVVGCTSEDVDVMVWRDIGKREAFISTYHGVSSTRCGETLNPSVVLDYNTCMGVVDRKAHQLSMYPIERKSTQVWYKKIFRRLLHASILNAHILLGNQLLTHRKFRKALIIDLLSAHGTRISISKTITKLHTPAQYDLIKSGKTDRLKRKCAVCGKRTITYCKACNVAMCLFTCYEPYHNSH

Keywords

Complete proteome   Reference proteome  

Feature

chain  PiggyBac transposable element-derived protein 4

Uniprot

A0A194RRT0   A0A3S2TBD2   A0A3S2PA36   A0A2H1V5F3   A0A3S2NGQ2   A0A3S2LRG0   + More
A0A2W1BDM1   A0A2A4JR95   A0A3S2TTE3   A0A2A4IYX3   A0A2W1B9N8   A0A2A4ITI3   A0A2A4IY54   A0A2J7Q6H1   A0A2A4K616   A0A2J7PIK3   A0A2J7QZK8   A0A3S2M360   A0A2J7PD69   A0A2J7QSN3   A0A3S2NSV7   A0A0L7L984   A0A0D9SEG0   G3QWT8   H2NMQ4   Q96DM1   K7DKZ9   A0A2K5UF88   A0A2K5KZS5   A0A2K5HN84   A0A2K6ALX5   A0A2K6NHE6   A0A2K5XAW3   A0A096NT85   A0A2K6JV20   H9F6U8   A0A2K6S7R1   G7MWA2   G7PAN9   A0A1D5R1S0   F7FDY8   A0A2K5PIR4   A0A2K5BXT0   A0A147BD88   A0A2J7Q8N9   A0A2J7QM52   A0A3Q0JNJ9   H9J3V8   A0A1B6E873   J9LP86   A0A2H1WWX9   A0A147BEZ3   A0A0K0E1W0   H9J421   A0A090X8N5   A0A060WWG9   A0A1B6H7X0   A0A1S3SQ06   J9K770   L7M1S0   A0A2J7PYC6   A0A3P8X756   A0A1S3SI45   E2B4V1   A0A2J7RB57   A0A1B6GS29   A0A2J7PLH5   A0A2J7QF67   A0A087UJ51   T2M852   A0A2J7PDJ3   A0A2J7Q696   A0A2J7PXL3   A0A2J7QV92   A0A2J7RQM3   A0A087TJF5   A0A1S3QP94   A0A2J7PE40   A0A2J7Q4C7   A0A2J7PVM1   A0A1B6LFF4   A0A2J7Q6F9   A0A1B6E8U4   A0A1B6KKZ3   A0A2J7PIT0   A0A0A9W0B8   A0A131YKY1  

Pubmed

26354079    28756777    26227816    22398555    14702039    16572171    + More
16136131    25362486    25319552    22002653    17431167    29652888    19121390    25970599    24755649    25576852    25069045    20798317    24065732    25401762    26823975    26830274   

EMBL

KQ459989    KPJ18766.1    RSAL01001012    RVE40990.1    RSAL01000155    RVE45659.1    + More
ODYU01000749    SOQ36006.1    RSAL01000045    RVE50637.1    RSAL01000024    RVE52239.1    KZ150113    PZC73302.1    NWSH01000726    PCG74565.1    RSAL01000003    RVE54733.1    NWSH01005160    PCG64390.1    KZ150197    PZC72319.1    NWSH01008683    PCG62453.1    NWSH01005605    PCG64100.1    NEVH01017475    NEVH01002684    NEVH01001351    PNF24176.1    PNF41738.1    PNF42927.1    NWSH01000091    PCG79681.1    NEVH01026401    NEVH01025126    NEVH01020854    NEVH01013255    NEVH01000629    PNF14193.1    PNF16176.1    PNF21085.1    PNF29260.1    PNF43158.1    NEVH01009069    PNF34004.1    RSAL01000056    RVE49901.1    NEVH01026393    PNF14286.1    NEVH01011876    PNF31583.1    RSAL01000097    RVE47692.1    JTDY01002247    KOB71806.1    AQIB01116437    CABD030095328    ABGA01233763    NDHI03003689    PNJ08370.1    AK057200    AK094816    AK289491    AC079203    AACZ04060380    GABC01006592    GABD01003812    GABE01001690    NBAG03000487    JAA04746.1    JAA29288.1    JAA43049.1    PNI20010.1    AQIA01062119    AHZZ02030739    JU326601    AFE70357.1    CM001259    EHH27175.1    CM001282    EHH62949.1    JSUE03037923    GEGO01007089    JAR88315.1    NEVH01016950    PNF24933.1    NEVH01013216    NEVH01006567    PNF29671.1    PNF37848.1    BABH01028864    GEDC01003168    JAS34130.1    ABLF02006169    ABLF02055685    ODYU01011285    SOQ56924.1    GEGO01006047    JAR89357.1    BABH01041064    GBIH01001829    JAC92881.1    FR904761    CDQ71327.1    GECU01037003    GECU01013756    JAS70703.1    JAS93950.1    ABLF02021061    GACK01007981    JAA57053.1    NEVH01020432    PNF21353.1    GL445643    EFN89283.1    NEVH01006563    PNF38066.1    GECZ01004548    JAS65221.1    NEVH01024425    PNF17185.1    NEVH01015301    PNF27232.1    KK120039    KFM77390.1    HAAD01001920    CDG68152.1    NEVH01026386    NEVH01013549    PNF14382.1    PNF28823.1    NEVH01017534    PNF24104.1    NEVH01020856    PNF21054.1    NEVH01010478    PNF32502.1    NEVH01000693    PNF43126.1    KK115494    KFM65244.1    NEVH01026110    PNF14604.1    NEVH01018384    PNF23441.1    NEVH01020945    PNF20387.1    GEBQ01017560    JAT22417.1    NEVH01017495    PNF24164.1    GEDC01002971    JAS34327.1    GEBQ01027849    JAT12128.1    NEVH01024959    PNF16251.1    GBHO01042743    GDHC01013469    JAG00861.1    JAQ05160.1    GEDV01009986    JAP78571.1   

Proteomes

UP000053240    UP000283053    UP000218220    UP000235965    UP000037510    UP000029965    + More
UP000001519    UP000001595    UP000005640    UP000002277    UP000233100    UP000233060    UP000233080    UP000233120    UP000233200    UP000233140    UP000028761    UP000233180    UP000233220    UP000009130    UP000006718    UP000008225    UP000233040    UP000233020    UP000079169    UP000005204    UP000007819    UP000035681    UP000193380    UP000087266    UP000265140    UP000008237    UP000054359   

PRIDE

Q96DM1    H9J3V8    H9J421   

Pfam

PF13843   DDE_Tnp_1_7        + More
PF13842   Tnp_zf-ribbon_2
PF00096   zf-C2H2
PF02017   CIDE-N

Interpro

IPR029526   PGBD        + More
IPR032718   PGBD4_C_Znf-ribbon       
IPR018159   Spectrin/alpha-actinin       
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
IPR003508   CIDE-N_dom       

SUPFAM

SSF57667   SSF57667       

ProteinModelPortal

A0A194RRT0   A0A3S2TBD2   A0A3S2PA36   A0A2H1V5F3   A0A3S2NGQ2   A0A3S2LRG0   + More
A0A2W1BDM1   A0A2A4JR95   A0A3S2TTE3   A0A2A4IYX3   A0A2W1B9N8   A0A2A4ITI3   A0A2A4IY54   A0A2J7Q6H1   A0A2A4K616   A0A2J7PIK3   A0A2J7QZK8   A0A3S2M360   A0A2J7PD69   A0A2J7QSN3   A0A3S2NSV7   A0A0L7L984   A0A0D9SEG0   G3QWT8   H2NMQ4   Q96DM1   K7DKZ9   A0A2K5UF88   A0A2K5KZS5   A0A2K5HN84   A0A2K6ALX5   A0A2K6NHE6   A0A2K5XAW3   A0A096NT85   A0A2K6JV20   H9F6U8   A0A2K6S7R1   G7MWA2   G7PAN9   A0A1D5R1S0   F7FDY8   A0A2K5PIR4   A0A2K5BXT0   A0A147BD88   A0A2J7Q8N9   A0A2J7QM52   A0A3Q0JNJ9   H9J3V8   A0A1B6E873   J9LP86   A0A2H1WWX9   A0A147BEZ3   A0A0K0E1W0   H9J421   A0A090X8N5   A0A060WWG9   A0A1B6H7X0   A0A1S3SQ06   J9K770   L7M1S0   A0A2J7PYC6   A0A3P8X756   A0A1S3SI45   E2B4V1   A0A2J7RB57   A0A1B6GS29   A0A2J7PLH5   A0A2J7QF67   A0A087UJ51   T2M852   A0A2J7PDJ3   A0A2J7Q696   A0A2J7PXL3   A0A2J7QV92   A0A2J7RQM3   A0A087TJF5   A0A1S3QP94   A0A2J7PE40   A0A2J7Q4C7   A0A2J7PVM1   A0A1B6LFF4   A0A2J7Q6F9   A0A1B6E8U4   A0A1B6KKZ3   A0A2J7PIT0   A0A0A9W0B8   A0A131YKY1  

KEGG

101740001    no KO assigned | (RefSeq) piggyBac transposable element-derived protein 4-like

GO

GO:0016021   GO:0003676   GO:0006915  

Length:

628

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.2354

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00477

outside

1  -  628

 

 

Pi

160.424032

Theta

197.280741

Tajima's D

-0.532236

CLR

0.647749

CSRT

0.228988550572471

Interpretation

Uncertain