SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12076  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004331
Annotation
FK506-binding_protein_[Bombyx_mori]
Full name
Peptidylprolyl isomerase      
Location in the cell
Cytoplasmic   Reliability : 2.59
 

Sequence

CDS
ATGGGTGTTACTGTTGAAACTATCAGTCCAGGAGACGAGTCGACCTACCCCAAATCAGGACAGACTGTAGTTGTTCACTACACTGGAACACTTACGAACGGCAAAAAGTTTGACTCATCGCGTGACCGTGGCAAGCCCTTCAAGTTCAGGATCGGAAAATCTGAAGTAATCCGTGGCTGGGATGAGGGTGTGGCAAAGATGTCTGTAGGTGAGCGTGCCAAATTAACCTGCTCTCCTGACTATGCTTACGGTCAGCAAGGCCACCCTGGAGTCATACCTCCCAACTCTACACTTATTTTCGATGTAGAACTTCTACGTCTCGAATAA
Protein
MGVTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE

Summary

Catalytic Activity
[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)
Feature
chain  Peptidylprolyl isomerase
EC Number
5.2.1.8
EMBL
BABH01032597    DQ443197    ABF51286.1    NWSH01008741    PCG62431.1    ODYU01003437    + More
SOQ42212.1    EF077224    ABK15648.1    KC481239    AGK45315.1    KZ150194    PZC72356.1    GBRD01002582    JAG63239.1    AGBW02013852    OWR42653.1    AF117595    AAF16717.1    RSAL01000029    RVE51807.1    JN546016    AFN85815.1    KQ461181    KPJ07655.1    AK401535    KQ459460    BAM18157.1    KPJ00825.1    KM923785    AJG43844.1    GAIX01005938    JAA86622.1    AJ278329    CAC38784.1    JTDY01000115    KOB78772.1    AJ634777    CAG25527.1    DQ443423    ABF51512.1    GBZX01002775    JAG89965.1    GEFH01004797    JAP63784.1    KQ971354    EFA06853.1    GFPF01007808    MAA18954.1    GEDV01011267    JAP77290.1    GACK01008719    JAA56315.1    GL732658    EFX68309.1    GBHO01011079    GBRD01002950    GDHC01011564    JAG32525.1    JAG62871.1    JAQ07065.1    GDIP01100803    GDIQ01037475    JAM02912.1    JAN57262.1    GALX01001349    JAB67117.1    CAEY01001893    KQ460009    KPJ18471.1    GDKW01002230    JAI54365.1    GECL01002975    JAP03149.1    GAHY01000974    JAA76536.1    KC481240    AGK45316.1    LJIJ01000029    ODN05147.1    AGBW02009448    OWR50789.1    CT737131    BC059682    AAH59682.1    EF070605    ABM55671.1    KPJ00692.1    GEMB01001474    GEMB01001473    JAS01683.1    GBBI01000576    JAC18136.1    GBGD01003565    JAC85324.1    GAIX01000169    JAA92391.1    GU075991    ACY92520.1    KZ288293    PBC28990.1    JR049571    AEY61004.1    GGLE01003128    MBY07254.1    GU588464    ADO28420.1    GU588804    ADO28758.1    GEBQ01022543    JAT17434.1    GFTR01001768    JAW14658.1    JTDY01008009    KOB64799.1    LNIX01000001    OXA63953.1    GEFM01003398    JAP72398.1    MNPL01009540    OQR73660.1    KK112716    KFM58382.1    GFWV01010330    MAA35059.1    GEZM01092425    JAV56561.1    GFJQ02001038    JAW05932.1    ADTU01009691    GEIB01001034    JAR87038.1    GEDC01024754    GEDC01009146    JAS12544.1    JAS28152.1    GDJX01006564    JAT61372.1    AHAT01027735    AHAT01027736    AHAT01027737    BT075507    ACO09931.1    GECZ01030680    JAS39089.1    GDIP01234754    JAI88647.1    GECZ01027015    JAS42754.1    GECU01030441    JAS77265.1    GADI01004934    JAA68874.1    BC041748    AAH41748.1    GANO01001136    JAB58735.1    NWSH01000415    PCG76549.1    ODYU01007025    SOQ49400.1    GFAH01000238    JAV48151.1    BX927368    BC081522    AAH81522.1    BC084619    BC086462    AAH84619.1    AAH86462.1    BT075719    ACO10143.1    GBXM01005698    JAI02880.1    BT043661    ACH70776.1    HADW01019090    HADX01009616    SBP31848.1    HAEB01009585    HAEC01014134    SBQ56112.1    LJIG01009607    KRT82741.1    BT126856    AEE61818.1    KZ150208    PZC72229.1   
Pfam
PF00254   FKBP_C
Interpro
IPR023566   PPIase_FKBP        + More
IPR001179   PPIase_FKBP_dom       
PDB
5TB4     E-value=2.15885e-44,     Score=444

Ontologies

Topology

Length:
108
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00184
Exp number, first 60 AAs:
0.00148
Total prob of N-in:
0.13836
outside
1  -  108
 
 

Population Genetic Test Statistics

Pi
146.689239
Theta
139.808674
Tajima's D
-1.150457
CLR
0.348408
CSRT
0.112844357782111
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28556443 SGQTVVVHYTGTLTNGK 100.00 1e-05
28556443 SGQTVVVHYTGTLTNGK 100.00 1e-05
28556443 SGQTVVVHYTGTLTNGK 100.00 1e-05
28556443 GVTVETISPGDESTYPK 100.00 1e-05
28556443 GVTVETISPGDESTYPK 100.00 1e-05
26822097 DIIEIVK 100.00 1e-05
26280517 GTGAEIPVNIK 100.00 1e-05
25044914 GVTTYFSSNCTEEDSNIVNDWMK 100.00 1e-05
24402669 GVTFNWR 100.00 1e-05
27102218 ITCSPDYAYGQQGHPGVIPPNSTIIFDVEIIRIE 100.00 1e-05
31250652 MRSPDLVVIR 100.00 1e-05
28467696 GVTSDSSITVPIHPK 100.00 1e-05
28556443 GVTVETISPGDESTYPK 100.00 1e-05
28556443 GWDEGVAK 100.00 1e-05
28556443 TAELSDLDK 100.00 1e-05
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