Gene

KWMTBOMO12075

Pre Gene Modal

BGIBMGA004330

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_calbindin-32-like_[Bombyx_mori]

Location

Bomo_Chr20(+):6810567-6818653      View in EpiBrowser

Full name

Calbindin-32      

Location in the cell

Cytoplasmic   Reliability : 1.718 Extracellular   Reliability : 1.442

CDS

ATGCTTTTATTTTGGTTGCAGGCGGTGTCTGATGAAATGCTGGTGGAGCTAAAGGCATGCTTCATGGAGGCTTACGATGACAATCAAGACGGAAAAATTGATATCCGAGAATTGGCGCAGTTGCTACCGATGGAGGAGAATTTTCTACTGCTATTTAGGTTTGATAATCCACTCGAATCCAGTGTCGAATTCATGAAGATTTGGCGGGAATATGACACCGACGGTAGCGGCTATATCGAGGCCGATGAACTCAAGAATTTTCTACGTGACTTATTAAAAGAAGCGAAGAAAATCAACGACGTCTCTGAAGATAAGCTGATTGAGTACACCGATACAATGTTACAGGTATTCGACTCAAACAAAGACGGCAGACTACAACTATCTGAAATGGCAAAATTACTTCCAGTTAAAGAGAACTTCCTTTGCAGACAGGTGTTCAAGGTAAGTGACAGTTCGTTACGCGCCAAAAAATTCACATCCATTCTGTCAAAAGATTATCCTTGCTTGGTTAAACTAAAAAAGGAGGCACATTAA

Protein

MLLFWLQAVSDEMLVELKACFMEAYDDNQDGKIDIRELAQLLPMEENFLLLFRFDNPLESSVEFMKIWREYDTDGSGYIEADELKNFLRDLLKEAKKINDVSEDKLIEYTDTMLQVFDSNKDGRLQLSEMAKLLPVKENFLCRQVFKVSDSSLRAKKFTSILSKDYPCLVKLKKEAH

Similarity

Belongs to the calbindin family.

Keywords

Calcium   Complete proteome   Metal-binding   Reference proteome   Repeat  

Feature

chain  Calbindin-32

Uniprot

A0A212EMD4   V5H4P1   A0A1Y1KXP3   D6WS36   A0A1B6GGN0   N6U930   + More
A0A1B6JWR1   A0A1B6JKK6   A0A1B6EV27   A0A1B6MKJ4   A0A1B6KN45   A0A2S2QM15   A0A1A9Y7W0   A0A182KT01   A0A067RR75   A0A2S2NMW3   A0A1B0BAJ9   A0A194QBL2   A0A1B6BZW3   A0A1B6ECN5   A0A182TJK4   A0A2J7RGJ4   A0A1B6DMH0   A0A2A4IY43   A0A1B6DMF8   A0A0A1XPG7   A0A2H8TKX2   T1DRW2   A0A336MAS7   A0A336KNZ9   A0A1W4VBL0   A0A0B4LFM0   B3NP41   B4QII5   P41044   B4P8J5   B4HTC2   B4KTC5   A0A0K8UUE3   B4LJE3   A0A0M5J517   B4MNG3   B4JW10   A0A0Q9WG76   B3MD84   A0A1W4UZA6   A0A0J9REL5   A0A0Q5VLB8   A0A3B0J559   Q290J5   B4GBR7   A0A0R1DV84   A0A0Q9XND9   A0A3B0J5A3   A0A0R3NMI5   A0A0P8ZQP8   A0A182IV50   T1PDG4   A0A1I8MXZ5   W8AWR5   A0A0K8U6C4   A0A0A1XDV8   A0A034WJ06   A0A1I8QFA2   A0A1I8QF86   W8B0D5   A0A0K8VLS7   A0A034WGD3   Q7Q003   A0A182UZX5   Q179X5   A0A2C9GQF9   A0A182Q5B1   A0A084WUK6   U5ETE4   A0A1D2NCT1   T1HBM6   A0A023F5V2   A0A226F1J5   A0A1J1II78   A0A0P5KTX0   A0A0P6EJY6   A0A0P5ANL3   A0A0N8AK24   E9FS47   A0A2P2IDZ3   A0A0P4XG13   A0A164PD78   A0A0P5DQT3   A0A0P6IC13   E0VTL5   L7LVI3   G3MFB9   A0A131YR01   A0A1E1X305   A0A0K8R6A5   A0A2R5LII9   A0A182PGD2   A0A182FVM5  

Pubmed

22118469    28004739    18362917    19820115    23537049    20966253    + More
24845553    26354079    25830018    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17994087    22936249    8478695    12537569    17550304    15632085    23185243    25315136    24495485    25348373    12364791    17510324    24438588    27289101    25474469    21292972    20566863    25576852    22216098    26830274    28503490   

EMBL

AGBW02013852    OWR42654.1    GALX01000688    JAB67778.1    GEZM01072986    JAV65338.1    + More
KQ971354    EFA05940.1    GECZ01008193    JAS61576.1    APGK01035160    APGK01035161    KB740923    KB632326    ENN78200.1    ERL92484.1    GECU01004058    JAT03649.1    GECU01007962    JAS99744.1    GECZ01028226    JAS41543.1    GEBQ01003470    JAT36507.1    GEBQ01027102    JAT12875.1    GGMS01009377    MBY78580.1    KK852513    KDR22249.1    GGMR01005912    MBY18531.1    JXJN01011031    JXJN01011032    KQ459460    KPJ00826.1    GEDC01030495    JAS06803.1    GEDC01001641    JAS35657.1    NEVH01003767    PNF39952.1    GEDC01010425    JAS26873.1    NWSH01004702    PCG64755.1    GEDC01010466    JAS26832.1    GBXI01001048    JAD13244.1    GFXV01002806    MBW14611.1    GAMD01001769    JAA99821.1    UFQS01000580    UFQT01000580    SSX05106.1    SSX25467.1    SSX05105.1    SSX25466.1    AE013599    AHN56307.1    CH954179    EDV55680.1    CM000362    CM002911    EDX07432.1    KMY94416.1    X68566    S59242    S59190    S59191    AY058340    CM000158    EDW92212.1    CH480816    EDW48223.1    CH933808    EDW10637.1    GDHF01022000    JAI30314.1    CH940648    EDW60523.1    CP012524    ALC41944.1    CH963848    EDW73652.1    CH916375    EDV98148.1    KRF79456.1    CH902619    EDV37417.1    KMY94417.1    KQS62400.1    OUUW01000001    SPP74813.1    CM000071    EAL25367.1    CH479181    EDW32325.1    KRK00398.1    KRG05411.1    SPP74812.1    KRT02107.1    KRT02108.1    KPU76808.1    AXCP01007474    KA646729    AFP61358.1    GAMC01016023    JAB90532.1    GDHF01030166    JAI22148.1    GBXI01004703    JAD09589.1    GAKP01005215    GAKP01005214    JAC53738.1    GAMC01016022    JAB90533.1    GDHF01012477    JAI39837.1    GAKP01005213    GAKP01005212    JAC53739.1    AAAB01008986    EAA00157.2    CH477343    EAT43061.1    APCN01003271    AXCN02001680    ATLV01027095    KE525423    KFB53900.1    GANO01001958    JAB57913.1    LJIJ01000088    ODN03064.1    ACPB03005873    GBBI01002153    JAC16559.1    LNIX01000001    OXA63081.1    CVRI01000050    CRK99474.1    GDIQ01179314    JAK72411.1    GDIQ01061465    JAN33272.1    GDIP01196291    JAJ27111.1    GDIQ01268067    JAJ83657.1    GL732523    EFX89968.1    IACF01006650    LAB72233.1    GDIP01242312    JAI81089.1    LRGB01002629    KZS06723.1    GDIP01153151    JAJ70251.1    GDIQ01006736    JAN88001.1    DS235767    EEB16690.1    GACK01010121    JAA54913.1    JO840570    AEO32187.1    GEDV01007582    JAP80975.1    GFAC01005777    JAT93411.1    GADI01007131    JAA66677.1    GGLE01005216    MBY09342.1   

Proteomes

UP000007151    UP000007266    UP000019118    UP000030742    UP000092443    UP000075882    + More
UP000027135    UP000092460    UP000053268    UP000075902    UP000235965    UP000218220    UP000192221    UP000000803    UP000008711    UP000000304    UP000002282    UP000001292    UP000009192    UP000008792    UP000092553    UP000007798    UP000001070    UP000007801    UP000268350    UP000001819    UP000008744    UP000075880    UP000095301    UP000095300    UP000007062    UP000075903    UP000008820    UP000075840    UP000075886    UP000030765    UP000094527    UP000015103    UP000198287    UP000183832    UP000000305    UP000076858    UP000009046    UP000075885    UP000069272   

PRIDE

P41044   

Pfam

PF13499   EF-hand_7        + More
PF00036   EF-hand_1
PF13202   EF-hand_5
PF13405   EF-hand_6

Interpro

IPR018247   EF_Hand_1_Ca_BS        + More
IPR002048   EF_hand_dom       
IPR011992   EF-hand-dom_pair       
IPR035799   EFh_CBN       
IPR000488   Death_domain       

SUPFAM

SSF47473   SSF47473       

CDD

cd16179  EFh_HEF_CBN

ProteinModelPortal

A0A212EMD4   V5H4P1   A0A1Y1KXP3   D6WS36   A0A1B6GGN0   N6U930   + More
A0A1B6JWR1   A0A1B6JKK6   A0A1B6EV27   A0A1B6MKJ4   A0A1B6KN45   A0A2S2QM15   A0A1A9Y7W0   A0A182KT01   A0A067RR75   A0A2S2NMW3   A0A1B0BAJ9   A0A194QBL2   A0A1B6BZW3   A0A1B6ECN5   A0A182TJK4   A0A2J7RGJ4   A0A1B6DMH0   A0A2A4IY43   A0A1B6DMF8   A0A0A1XPG7   A0A2H8TKX2   T1DRW2   A0A336MAS7   A0A336KNZ9   A0A1W4VBL0   A0A0B4LFM0   B3NP41   B4QII5   P41044   B4P8J5   B4HTC2   B4KTC5   A0A0K8UUE3   B4LJE3   A0A0M5J517   B4MNG3   B4JW10   A0A0Q9WG76   B3MD84   A0A1W4UZA6   A0A0J9REL5   A0A0Q5VLB8   A0A3B0J559   Q290J5   B4GBR7   A0A0R1DV84   A0A0Q9XND9   A0A3B0J5A3   A0A0R3NMI5   A0A0P8ZQP8   A0A182IV50   T1PDG4   A0A1I8MXZ5   W8AWR5   A0A0K8U6C4   A0A0A1XDV8   A0A034WJ06   A0A1I8QFA2   A0A1I8QF86   W8B0D5   A0A0K8VLS7   A0A034WGD3   Q7Q003   A0A182UZX5   Q179X5   A0A2C9GQF9   A0A182Q5B1   A0A084WUK6   U5ETE4   A0A1D2NCT1   T1HBM6   A0A023F5V2   A0A226F1J5   A0A1J1II78   A0A0P5KTX0   A0A0P6EJY6   A0A0P5ANL3   A0A0N8AK24   E9FS47   A0A2P2IDZ3   A0A0P4XG13   A0A164PD78   A0A0P5DQT3   A0A0P6IC13   E0VTL5   L7LVI3   G3MFB9   A0A131YR01   A0A1E1X305   A0A0K8R6A5   A0A2R5LII9   A0A182PGD2   A0A182FVM5  

PDB

2Q4U     E-value=1.44388e-34,     Score=361

KEGG

101739587    no KO assigned | (RefSeq) calbindin-32-like

GO

GO:0005509   GO:1900271   GO:0030425   GO:0043005   GO:0045202   GO:0098793   GO:0005829   GO:0005634   GO:0099509   GO:0097467   GO:0061175   GO:1903035   GO:0007165   GO:0016021   GO:0008270   GO:0003743   GO:0005737   GO:0006432   GO:0000049   GO:0000287   GO:0008033   GO:0003676   GO:0016787  

Length:

177

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01909

outside

1  -  177

 

 

Pi

153.518885

Theta

157.617678

Tajima's D

-0.422529

CLR

14.681264

CSRT

0.260586970651467

Interpretation

Uncertain