SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12074  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004286
Annotation
uncharacterized_protein_LOC100272181_precursor_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.646
 

Sequence

CDS
ATGAAATCTACACTACTGCTCCTGTTGGTTGTCGTCGCAGCGGTGTCAGCCGTTGAAAAGGAAGATTTCGATTCCTTTAGGAGATCTACCTTGAACCTAGGGGTTATCGGAAACCAAGATAGACTTTTGCGAAGTGAGAATTTCGTCCGTGCTTCTATGGTGTCATCGTGGGCTCACCCATTGACTTTGTTTGCGCCTACCGGTACTCGCATCAACGCCATACGCGCTAGAGAAGTTGGGGCATCACAGTCCGGTTCGATCAGGCTTACTCACGGCGGACTCGGTTCCACCTTTGCCGCTTTTGACATTACGAACGCAGCCGGCAGGGGATTGAACTACAGGGTGGAAATTTGGGGACGTTAA
Protein
MKSTLLLLLVVVAAVSAVEKEDFDSFRRSTLNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTGTRINAIRAREVGASQSGSIRLTHGGLGSTFAAFDITNAAGRGLNYRVEIWGR

Summary

EMBL
BABH01032595    BABH01032596    FJ790244    ACN81326.1    KZ150194    PZC72361.1    + More
BABH01032589    PZC72359.1    PZC72360.1    FJ425874    ACJ66918.1    GBRD01000009    JAG65812.1    JQ660350    AFH57167.1    KQ461181    KPJ07657.1    ODYU01002993    SOQ41189.1    KQ459460    KPJ00828.1    GDQN01006968    JAT84086.1    JQ619221    AFH57159.1    JQ619222    AFH57160.1    JQ619223    AFH57161.1    KX230117    AOD62626.1    JQ619219    AFH57157.1    NWSH01004702    PCG64756.1    NWSH01001565    PCG70846.1    PCG70852.1    BABH01032590    BABH01032591    FJ770215    ACN94451.1    JQ619217    AFH57155.1    PCG70849.1    PCG70850.1    JQ619220    AFH57158.1    ODYU01012203    SOQ58383.1    PZC72366.1    JQ619228    AFH57166.1    ODYU01005994    SOQ47446.1    HM357853    AEA76319.1    HM357854    AEA76320.1    PCG70854.1    PZC72367.1    PCG70847.1    BABH01032580    BABH01032581    HM357851    AEA76317.1    SOQ58382.1    JQ619218    AFH57156.1    PZC72364.1    AGBW02013852    OWR42655.1    BABH01032583    DQ847154    DQ875230    ABH10141.1    ABK29472.1    PCG70851.1    ODYU01002813    SOQ40767.1    JTDY01004303    KOB68308.1    LADJ01057474    KPJ21578.1    PZC72362.1    GFDL01001947    JAV33098.1    JQ619225    AFH57163.1    KPJ00827.1    JQ660353    AFH57170.1    JQ660351    AFH57168.1    AK417062    BAN20277.1    PZC72363.1    BABH01032587    GBRD01001382    JAG64439.1    HM357852    AEA76318.1    SOQ40768.1    HM357849    AEA76315.1    SOQ40769.1   
Pfam
PF15868   MBF2
Interpro
IPR031734   MBF2        + More
IPR018247   EF_Hand_1_Ca_BS       
IPR011992   EF-hand-dom_pair       
IPR002048   EF_hand_dom       
SUPFAM
SSF47473   SSF47473       

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.997282
 
 
Length:
120
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.42793
Exp number, first 60 AAs:
0.35111
Total prob of N-in:
0.03877
outside
1  -  120
 
 

Population Genetic Test Statistics

Pi
82.310194
Theta
152.357042
Tajima's D
-1.118607
CLR
0.978205
CSRT
0.116494175291235
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 NLTPVTLELGGK 100.00 1e-08
28556443 RINAIR 100.00 2e-08
28556443 ASMVSSWAHPLTLFAPTGTR 100.00 2e-08
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