SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12070  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004288
Annotation
uncharacterized_protein_LOC100216500_precursor_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 1.597
 

Sequence

CDS
ATGTTCAATAATCAAGAACGGTCCTTCCAGCAAGACTCGGCGGCGGGTCATAAAGCTCGGTCTACGCAGTCTTGGTTGGAAACGAACGTTTCGGACTTCATCAGAGCTGAACACTGGCCGTCGTCTAGTCCCGATCTTAATCCGCTGGATTATGATTTATGTTCACTTCTTTGCTACAAGATGAAGTTCGCTCTTCTGTTCGTGTTGACCGCAGTCGTCGCCGTGTCAACTGATGAAGTGGCTGACCCCAGCTCTACTAGCAGAGCAAACGGTTTGGCAATAGGCAGTATTGCTCCAAATGATAGACTGTTACGGAGCTTCGTTGTGACTCGTGCTGCGACAGCCAGCTCGCAGGCTGTCAACGTGAGTTCACTTCTTTGCTACAAGATGAAGTTCGCTCTTCTGTTCGTATTGACCGCAGTCGTCGCCGTGTCAACTGACGAAGTGGCTGACCCCAGCTCCACTAACAGAGCTAACGGCTTGAGCATCGGCAGTATTGCTCCAAATGATAGACTGTTACGGAGCTTCGTTGTGACTCGTGCTGCGACAGCCAGCTCGCAGGCTGTCAACGTGAGGTACACGGCGCCCGCCGGTAGACGCGTCAGGGCCGTCCGAGCCCGGGAAGTAGGGGTGTCCCAGTTCGCGACCGTCCGCCTTGTCGGGGGCGGGATGAAGTTCGCTCTTCTATTCGTGTTGACCGCGGTCGTCGCCGTGTCGACTGATGAAGTGGCTGACCCCAGCTCTACTAGCAGAGCAAACGGTTTGGCAATCGGCAGTATTGCTCCAAATGATAGACTGTTACGGAGCTTCGTTGTGACTCGTGCTGCGACAGCCAGCTCGCAGGCTGTCAACGTGAGGTACACGGCGCCTGCCGGTAGACGCGTCAGGGCCGTCCGAGCCCGGGAAGTAGGGGTGTCCCAGTTCGCGACCGTCCGCCTTGTCGGGGGCGGGGTCGGTTCAACTTTCGTCACTCTCCAGTTCAGAAACTCAGCACGAAGAGGATATCACTTCAATGTACAGATTTGGGGACGCTAA
Protein
MFNNQERSFQQDSAAGHKARSTQSWLETNVSDFIRAEHWPSSSPDLNPLDYDLCSLLCYKMKFALLFVLTAVVAVSTDEVADPSSTSRANGLAIGSIAPNDRLLRSFVVTRAATASSQAVNVSSLLCYKMKFALLFVLTAVVAVSTDEVADPSSTNRANGLSIGSIAPNDRLLRSFVVTRAATASSQAVNVRYTAPAGRRVRAVRAREVGVSQFATVRLVGGGMKFALLFVLTAVVAVSTDEVADPSSTSRANGLAIGSIAPNDRLLRSFVVTRAATASSQAVNVRYTAPAGRRVRAVRAREVGVSQFATVRLVGGGVGSTFVTLQFRNSARRGYHFNVQIWGR

Summary

Uniprot
ProteinModelPortal
PDB
5CR4     E-value=0.00409072,     Score=94

Ontologies

GO

Topology

Length:
344
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
27.98975
Exp number, first 60 AAs:
0.48813
Total prob of N-in:
0.48573
outside
1  -  344
 
 

Population Genetic Test Statistics

Pi
59.894285
Theta
160.900745
Tajima's D
-1.57312
CLR
3258.653724
CSRT
0.0516474176291185
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 ANGLAIGSIAPNDR 100.00 0.006
28556443 ANGLAIGSIAPNDR 100.00 0.006
28556443 ANGLAIGSIAPNDR 100.00 0.033
28556443 ANGLAIGSIAPNDR 100.00 0.033
28556443 ANGLAIGSIAPNDR 100.00 0.033
28556443 ANGLAIGSIAPNDR 100.00 0.033
28556443 ANGLAIGSIAPNDR 100.00 0.033
28556443 ANGLAIGSIAPNDR 100.00 0.033
28556443 AATASSQAVNVR 100.00 0.033
28556443 AATASSQAVNVR 100.00 0.033
28556443 AATASSQAVNVR 100.00 0.033
28556443 AATASSQAVNVR 100.00 0.033
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