SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12067
Pre Gene Modal
BGIBMGA004294
Annotation
PREDICTED:_probable_salivary_secreted_peptide_[Amyelois_transitella]
Full name
Probable salivary secreted peptide      
Location in the cell
Extracellular   Reliability : 2.533
 

Sequence

CDS
ATGAATACAATTTTGGTCTTCGCGTTAGTCGTGTTGGCTGCTACCAATGCGGCCATACTACCGTCTAGTACGAGAGCCAACCTAATCGTTGGCTACGTTAGTACAGGAGACAGACTTTTGTACAGATCCTACGTATACCAGCCAGCTAGGCCGAATACTATTCAATACCAAGACATAGTGTATCGCGGTAACGCAACGACGCGCATTACGGCTATACAGGCCACGGAAGTTGGGGCAACTCAGTACGCATCAGCCTGGATCCTGTCTGGCGGGCTCAGTCAGAACAACGTCACGGTCCGATTCCAATCAGCTAGAGGATACGGATATTATTACCTCTTCGACGTATGGGGACGCTAA
Protein
MNTILVFALVVLAATNAAILPSSTRANLIVGYVSTGDRLLYRSYVYQPARPNTIQYQDIVYRGNATTRITAIQATEVGATQYASAWILSGGLSQNNVTVRFQSARGYGYYYLFDVWGR

Summary

Keywords
Secreted   Signal  
Feature
chain  Probable salivary secreted peptide
EMBL
BABH01032580    GDQN01006968    JAT84086.1    AGBW02013852    OWR42655.1    KQ459460    + More
KPJ00827.1    LADJ01057474    KPJ21578.1    OWR42656.1    JQ619217    AFH57155.1    NWSH01001565    PCG70847.1    KQ461181    KPJ07657.1    ODYU01012203    SOQ58383.1    SOQ58382.1    JQ619220    AFH57158.1    ODYU01005994    SOQ47446.1    KPJ00828.1    HM357852    AEA76318.1    KZ150194    PZC72365.1    PCG70850.1    HM357850    AEA76316.1    HM357849    AEA76315.1    PCG70849.1    PCG70852.1    JQ619219    AFH57157.1    PZC72366.1    JQ619218    AFH57156.1    PZC72367.1    PCG70851.1    JQ619221    AFH57159.1    JQ619223    AFH57161.1    JQ619222    AFH57160.1    PCG70846.1    PZC72363.1    NWSH01004702    PCG64756.1    KX230117    AOD62626.1    ODYU01002993    SOQ41189.1    PZC72360.1    PZC72359.1    PZC72361.1    PCG70854.1    GBRD01000009    JAG65812.1    BABH01032596    FJ790244    ACN81326.1    JQ660350    AFH57167.1    JQ660363    AFH57180.1    GBRD01001382    JAG64439.1    PZC72364.1    PZC72362.1    DQ847154    DQ875230    ABH10141.1    ABK29472.1    KZ150513    PZC70634.1    PCG70853.1    BABH01032589    FJ425874    ACJ66918.1    JQ619228    AFH57166.1    CH902626    EDV41416.1    SOQ41190.1    ODYU01002813    SOQ40767.1    BABH01032590    BABH01032591    FJ770215    ACN94451.1    MK075118    AYV99521.1    GL764626    EFZ17421.1    NNAY01003645    OXU19058.1    EFZ17404.1    AE014298    BT032757    KX531790    ABC67180.1    ACD81771.1    AHN59527.1    ANY27600.1    LBMM01010220    KMQ87597.1    MK075150    AYV99553.1    HM357854    AEA76320.1    HM357853    AEA76319.1    JQ619225    AFH57163.1    EU860214    HM357851    AEA76317.1    CM000162    EDX02853.1    LBMM01005641    KMQ91343.1    DS570647    EDY49959.1    CM000914    EFG03676.2    CH983723    EDX16521.1    GL453160    EFN76403.1    DS570654    EDY50506.1    EFG03588.2    KZ150342    PZC71303.1    JQ660351    AFH57168.1    CH480830    EDW45626.1    KZ288189    PBC34605.1    CH954180    EDV46246.2    MK075154    AYV99557.1    ADTU01023538    KQ976500    KYM83037.1    SOQ40768.1    GFDL01001947    JAV33098.1    KQ982907    KYQ49358.1    EFZ17405.1    LBMM01007892    KMQ89328.1    KZ149931    PZC77359.1    KZ150335    PZC71331.1    GFTR01002196    JAW14230.1    JQ660353    AFH57170.1   
Pfam
PF15868   MBF2
Interpro
IPR031734   MBF2        + More
IPR018247   EF_Hand_1_Ca_BS       
IPR011992   EF-hand-dom_pair       
IPR002048   EF_hand_dom       
SUPFAM
SSF47473   SSF47473       

Ontologies

Topology

Subcellular location
Secreted  
SignalP
Position:   1 - 17,         Likelihood:  0.993338
 
 
Length:
118
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
15.03082
Exp number, first 60 AAs:
14.74291
Total prob of N-in:
0.38334
POSSIBLE N-term signal
sequence
outside
1  -  118
 
 

Population Genetic Test Statistics

Pi
49.089369
Theta
40.815622
Tajima's D
-1.696576
CLR
2002.764748
CSRT
0.0361481925903705
Interpretation
Possibly Positive selection
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号