Silkworm Genome Informatics Database

Gene

KWMTBOMO12056 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004327

Annotation

PREDICTED:_endonuclease_G?_mitochondrial?_partial_[Bombyx_mori]

Location

Bomo_Chr20(+):6502730-6511466 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 2.121

CDS

ATGACTGCACATCAAACCGAACTATTAAGATCTGGCTTAGATAATTTTTTGATGATCGGCGATGTGTACAGGAGAGATGAAATTGACTCTACACATTTTCCAGTTTTCCATCAGGTAGATGCAGTGAGATCACAGCGCAAAGAGGAGTTGTTTTGTGATAAACCAGATCTAGAAATTTTTGAGCCAGAATTTGATTCAAGTAATCCTAATGCATTCAAAAATTCCATAATGGATCCAATGAAACAAAGTTGCCATACGCTGGAAGCCACAAAGTTAATGGAATCACAATTAAAAAATCATCTTATAGGTCTATGCAAAGCTTTATTCGGGGAAAATATTAAGCACAGATGGGTGGAAGCTTATTTTCCATTCACTCATCCATCATGGGAGCTGGAAATATATTATGAAAATAAATGGTTGGAGGTACTTGGCTGCGGTATTGTGAGGAATGAAATATTGGCCAATATTGGTCCAAATAATTCAATTGCATACGCTTTTGGATTAGGATTAGAAAGACTTGCTATGGCTATGTACAAAATACCAGATATAAGGCTGATGTGGAGTACAGATTCAGGATTTTTGAATCAATTTCAAATTGAAAATATCAACGCTAATATTACATATAAGCCAGTATCTGTGTACCCTCAGTGTACGAATGATATTTCATTTTGGCTACCGGAAACTCTTACAGTTGATACATTTACTAATAATGATTTTTATGATCTAGTTAGGGATGTTGGAGGTGACATAATTGAACAGGTGAAATTAAAGGACAAGTTTATACATCCGAAGACCAAGAAGCATAGTCTTTCTCAATTAAGTGCTATCGGCTTGACTGGATATTATATAGGACAATGCAATGGTAAAAATACTACTCAAGATTGTATAGAGGTCGATGGTAAACTCCTGACGAGCTTACCAGCATTGCCTGTGTTCGGAACTGTGTCTGCCGCCGTGCCATACACTGAAAGTGGTGGTTCGAAGGACACAACTAGGGTATCTCAAATAATGAAATATGGCTTCCCCGGCCTCGACAATATTCGTTCATATGATGATTATGTGTTGTCTTACGACCGTCGCACAAGAGTACCACACTGGGTTTTTGAACATTTAACAAAAGCACACATTGCCAAAAATGATCAGGTTGATAGGAGTAAATGTGACTTTATGCCTGATGAAAGTATACATCCATTCTTTAGATCTTTAAATAGTGACTACAAAGGATCTGGTTTTGATAGAGGTCATATGGCTGCGGCCGGAAACCACAGGCTCGCACAGAAACATGTCGAACAAACCTTTTACCTAACTAATATGGCTCCGCAGGTTGGGGAAGGATTCAACAGACATGCTTGGAATAGACTTGAGAAACATGTTCGTAAATTAACCAAATTGTATGATCACGTATATTGTTGCACAGGACCATTGTATCTTCCGAGGAAAGAATCCGACGGTAAATCGTATGTTCGTTATCAAGTTATAGGAGCAAACACAGTGGCGGTACCAACTCATTTCTACAAGGTAGTCGTGGGTGAGGCCCCAGATGGTACATTGGATATGGAAGCCTATGTCATGCCCAACCAGAAGATACCTGATGAGACACCAGTGTCTTCTTTTATGGTGCCTCCAGAAACTATAGAAAGGGCGGCTGGATTGCTATTCTTCGACAAAATACATAGAAGTAAATTAAGCAGAATAAATGGGAAGAAAGTATGA

Protein

MTAHQTELLRSGLDNFLMIGDVYRRDEIDSTHFPVFHQVDAVRSQRKEELFCDKPDLEIFEPEFDSSNPNAFKNSIMDPMKQSCHTLEATKLMESQLKNHLIGLCKALFGENIKHRWVEAYFPFTHPSWELEIYYENKWLEVLGCGIVRNEILANIGPNNSIAYAFGLGLERLAMAMYKIPDIRLMWSTDSGFLNQFQIENINANITYKPVSVYPQCTNDISFWLPETLTVDTFTNNDFYDLVRDVGGDIIEQVKLKDKFIHPKTKKHSLSQLSAIGLTGYYIGQCNGKNTTQDCIEVDGKLLTSLPALPVFGTVSAAVPYTESGGSKDTTRVSQIMKYGFPGLDNIRSYDDYVLSYDRRTRVPHWVFEHLTKAHIAKNDQVDRSKCDFMPDESIHPFFRSLNSDYKGSGFDRGHMAAAGNHRLAQKHVEQTFYLTNMAPQVGEGFNRHAWNRLEKHVRKLTKLYDHVYCCTGPLYLPRKESDGKSYVRYQVIGANTVAVPTHFYKVVVGEAPDGTLDMEAYVMPNQKIPDETPVSSFMVPPETIERAAGLLFFDKIHRSKLSRINGKKV

Uniprot

NA

ProteinModelPortal

NA

PDB

3ISM E-value=1.16475e-110, Score=1024

KEGG

100529218 K01173 endonuclease G, mitochondrial | (RefSeq) endog; endonuclease G, mitochondrial

GO

GO:0000166 GO:0004826 GO:0005524 GO:0005737 GO:0006432 GO:0000049 GO:0000287 GO:0008033 GO:0003676 GO:0016787 GO:0046872 GO:0004812 GO:0043039

Length:

570

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0635200000000001

Exp number, first 60 AAs:

0.00017

Total prob of N-in:

0.00426

outside

1 - 570

Pi

255.713201

Theta

164.074346

Tajima's D

0.866856

CLR

0.012382

CSRT

0.623668816559172

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics