SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12051
Annotation
TRASDJ_[Saturnia_japonica]
Location in the cell
Mitochondrial   Reliability : 3.731
 

Sequence

CDS
ATGCTGTATACAACATTGTATCAGGTGACGAATCCTGGATATACGCGTACGAACCCGAAACAAATCCACTTGACGATGACCAACAGATGTCTAGAATTGGGCCTTTTCCCCACCATCTGGAAGGAGGCCACGGTAGTGGTATTAAGAAAGCCGGGCAAGGAAACTTATACTGCACCAAAGTCTTATAGACCCATCGGCCTCCTCCCGGTGATGGGGAAACTGCTCGAGAGGATGATCGTTGGCCGTCTCAGGTGGCATCTGGTCCCCAGACTGAGCTCGAGACAGTATGGCTTCGTACCGCAGAAGAGCACGGAGGACTCCCTCTATGATCTGATGGAACACGTACGTGATAAGCTAAAACGAAAACAACTAATTATAGCTATGGTTTCACTAGAGATAGAGGGGGCCTTTGACAGCGCATGGTGGCCCGCCATCAGACTGAGGTTGGCGGAGGAGAAGTGTCCTATCAACATTCGAAGAATACTCGACTATCTGACATATAGAAAGGTTAAGGTGAGGTATGCAGGAGAGGAGACGCAAAAAAGCACCAGTAAGGGGTGCGTACAGGGTTCGATAGGGGGACCCATCTTATGGAACCTCCTGATCGACCCCCCTACTGAAAAATCTGGAGCAAAGGGGACACCACGTACAACAGTGGAACCGGTCATCATGTATGCGGCTGGGGCCTGGGCAAGGTCCGCTGCAAAGCTGGCATCCAGAAAGCAACTCAATGTGGTGCAAAGAGGCTTCGCCCAAAAAATATGCAGAGCATACAGAACGGTTTCGCTCAACTCCGCACTCGCACTGTCAGGAATACTGCCTCTCGACCTCCGTATCAAAGAGGCTGCCACAATCTTTGAGATTAAGAAACGAAATAAGGAGCATGCCTACGGAGATAGGGGGTCGACAAGGAAGTACCGTACACCAAAACCGCACACCCTGCATGTCGTTTCTGAACTCCGTAAAGAGAACTGCAACCGCCGCATCATCCTCCATCACGACAATGCGAGTTCTCACACCGCGCACAGAACAAAAGAGTTTTTAGAGCAAGAAAACATACAATTATTAGACCATCCGCCGTACAGCCCCGACCTAAGCCCTAATGATTTCTATACTTTCCCTAAAATAAAGAATAAATTGCGTGGACAGAGATTTTCATCACCTGAAGAAGCTGTGGACGCCTACAAAACGGCAATTTTGGAGACCCCAACTTCCGAATGGAATGGTTGCTTCAATGATTGA
Protein
MLYTTLYQVTNPGYTRTNPKQIHLTMTNRCLELGLFPTIWKEATVVVLRKPGKETYTAPKSYRPIGLLPVMGKLLERMIVGRLRWHLVPRLSSRQYGFVPQKSTEDSLYDLMEHVRDKLKRKQLIIAMVSLEIEGAFDSAWWPAIRLRLAEEKCPINIRRILDYLTYRKVKVRYAGEETQKSTSKGCVQGSIGGPILWNLLIDPPTEKSGAKGTPRTTVEPVIMYAAGAWARSAAKLASRKQLNVVQRGFAQKICRAYRTVSLNSALALSGILPLDLRIKEAATIFEIKKRNKEHAYGDRGSTRKYRTPKPHTLHVVSELRKENCNRRIILHHDNASSHTAHRTKEFLEQENIQLLDHPPYSPDLSPNDFYTFPKIKNKLRGQRFSSPEEAVDAYKTAILETPTSEWNGCFND

Summary

Uniprot
ProteinModelPortal
PDB
3K9K     E-value=1.85352e-10,     Score=158

Ontologies

GO

Topology

Length:
413
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.18734
Exp number, first 60 AAs:
0.00671
Total prob of N-in:
0.01883
outside
1  -  413
 
 

Population Genetic Test Statistics

Pi
3.028326
Theta
21.792202
Tajima's D
0.732249
CLR
0
CSRT
0.588520573971301
Interpretation
Uncertain
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