Gene

KWMTBOMO12043

Pre Gene Modal

BGIBMGA004308

Annotation

PREDICTED:_uncharacterized_protein_LOC106135922_[Amyelois_transitella]

Location

Bomo_Chr20(-):6228412-6247549      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.645

CDS

ATGGGTAATGCCATTGGAAAATTTCTAACTGCGGGCAACGTTCAAGGTGCTGGCTCGGTTCTCGATAGAGTCATATCCCAGCCGAGCAGCGAAGACCACACCGTACTTTACAAATTAGCTGATTATAAGAAAGGCGGTCTACTTTTAGAGACCTACGCGAAAGGTGGCATGACAGCCGCTGAAAAGTTAATGAGAGACGAATTCGCTGCATACATGTACGGCGGAGGGAGGGGCCGGGTCATCAATCGTGCTGAATACTTGAGATGGAAGTTCAGAGACCAAGAACAGGTTGTACTTCCAATTGAAGCATCGCTCTCACCTTATGACCCGCTCGCCAAATGGGAAGATCACACCGCCTGTTGGCAGATGTGTTATAGAGGAGCTCTCGGCGAATCATTGCTTCATGTACTCATTATTTGTGATACTAAGATTCATACAAGATTAGCTCGAACTCTAGTAAAATGTTTTCCGAAGCTGTCACTAGATGTCGTTGAAGGTGAAGAATATTTAGGGGCAAGCTCTTTACATCTGGCAATAGCGTACAGCAATAACGAACTAGTACAAGATCTAGTTGAGGCCGGAGCTGATGTCAACCAGAGAGCCATTGGTAGCTTTTTCCTACCCCGCGACCAACAAAGAGTTCCGCCAGCGCGACAAACAAATTACGAAGGTCTGGCATACTTGGGCGAATACCCCCTAGCCTGGACGGCTTGTTGCGCGAACGAAGCAGTCTACAACCTCTTACTAGATTCCGGGGCAGATCCCGATGCTCAGGATTCGTTCGGGAACATGATACTACACATGGTGGTCGTTTGTGATAAACTGGACATGTTTGGATATGCCCTGCGTCACCCTAAAGTTCCGGCCAGTAACGGTCGAATGAATAAAGCAGGTTTCACCCCACTAACCTTGGCTTGTCAGTTGGGTCGGGCCTCTGTCTTCAGAGAGATGCTGGAGCTATCAGCCAGAGAGTTCTGGCGCTACTCCAACATTACGTGCTCCGCTTACCCTTTGAACGCTTTAGATACCTTGCTGCCTGATGGGCGAACAAATTGGAATTCGGCTTTATTCATTATACTGAACGGAACAAAGCAAGAACACTTGAACATGTTAGACGGCGGTATCATACAAAGGTTGCTTGAAGAAAAATGGAAGACTTTCGCCAGGACGAAATTCCTCAAACGTCTCCTCATACTGATGCTGCATCTTCTCCTGCTCTCCGTTTCTGTGTACCTACGTCACAGCAGCGCAGAAGCTGATGCCCACCCCAACTGGGGCTTGGAGATCAACGACGCTAGAAGCGGACTGAGACTTGCCAGTGAACTTGGGACTATATTGAGCACATTGTGTTATATTATACTGCAACAAGGCGACGAGCTAAAGAATCAAGGATTGGTCGCTTATTTTAAGCAGTTGATTCACGAGCCGGCCAAATTTATATTTTTGGCGTCAAACATCCTTGTGTTAGCGTGCATACCGGCCAGACTCCTTAAGGAGACCAACGTGGAGGAAGCCATACTGCTTTTCCTGCTGCCGGGATCGTGGTTTTTGTTGATGTTTTTTGCTGGCGCGGTGAAATTGACCGGTCCATTCGTGACAATGATCTACAGTATGATAACAGGGGACATGTTCACGTTCGGTATCATCTACTGTATTGTCCTCTTCGGCTTCTCGCAGTCATTCTACTTCTTGTATAGAGGTTTTCCAAACGTACAGTCGACTTTGTACTCGAGCTACCCCAGCACGTGGATGGCACTATTCCAAATCACCTTAGGAGATTACAGCTACTCGGATCTCAGTCAGACAACATACCCTAATCTCTCGAAGACTGTGTTCACGGTGTTCATGATATTCGTGCCAATTCTACTATTGAACATGTTGATCGCCATGATGGGGAACACGTACGCCCACGTCATTGAGCAATCCGAGAAGGAATGGGTCAAACAGTGGGCGAAAATTGTGGTATCACTAGAGCGTTCAGTGGCCCAGGATGACGCACATAAGTACTTGCAGGAGTATTCTATAGGACTTGGGCCTTCCGACGATCCGAGATACGAGCAACGAGCGGTCATGGTCATCAAGAGCAAAGCTAAAACTAGAGCGAAACAGAAGAAAGACGCTTTAACTAATTGGAAGCACGTCGGTAAAGTGACAATAGCAGAGTTGAGAAGACGCGGTATCAGCGGTGAAGAGTTACGTAGATTGATGTGGGGCCGTATTTCAATTTCGACACCAACAAAAGCTCCCTTGCCGCGAAGAGTCCCAGCCCCGCCTCCAGACTGCGTGGTTTCGTCAGACGTGGGTTTAGCTAGTGACGTAGGGAACGGTGTAGCACCAGCTCTCTCGTCAGCTCTCAACGTCATGGCCTTCACTCACGAATTAGACATTGGCACTACTGGTTCTGATCAAAAACAAACTACACCGGACTTGTTGGTCAACGGCAAAACTTCCAATGCCCCAATCTTAACTACCGGTACCCAAATGCCAAAAGTTTCAAGCAAAACTCTCGGTACACCAGTGGCACGTATTGAAGCATCTTCACTTAAGACGCCTTTGGATGTTAAATTAAACCCAACAACATTGACACAGTCCACGGTTCAGGGTAATATAGGTAATGTCAATATTCCTATAAGTGGAGTGAAAATAACAACAAATGTTGGACAAAACTCCGCGGTAGTACCTGAGATTCAACAGTCGAATGAAAATCAGAAACCTGAGCAAGTACACCAAGATTATCTGCGTGAACTCATAGTTCTTGCTGAGAAACCTGCAACCACTAATCTTGAACTCAAACAACTTGCTGAGAAAGCGGCTGATCTGAGAGATGTACCGGAAATTGATATTAACATCAATGTGAGTTAG

Protein

MGNAIGKFLTAGNVQGAGSVLDRVISQPSSEDHTVLYKLADYKKGGLLLETYAKGGMTAAEKLMRDEFAAYMYGGGRGRVINRAEYLRWKFRDQEQVVLPIEASLSPYDPLAKWEDHTACWQMCYRGALGESLLHVLIICDTKIHTRLARTLVKCFPKLSLDVVEGEEYLGASSLHLAIAYSNNELVQDLVEAGADVNQRAIGSFFLPRDQQRVPPARQTNYEGLAYLGEYPLAWTACCANEAVYNLLLDSGADPDAQDSFGNMILHMVVVCDKLDMFGYALRHPKVPASNGRMNKAGFTPLTLACQLGRASVFREMLELSAREFWRYSNITCSAYPLNALDTLLPDGRTNWNSALFIILNGTKQEHLNMLDGGIIQRLLEEKWKTFARTKFLKRLLILMLHLLLLSVSVYLRHSSAEADAHPNWGLEINDARSGLRLASELGTILSTLCYIILQQGDELKNQGLVAYFKQLIHEPAKFIFLASNILVLACIPARLLKETNVEEAILLFLLPGSWFLLMFFAGAVKLTGPFVTMIYSMITGDMFTFGIIYCIVLFGFSQSFYFLYRGFPNVQSTLYSSYPSTWMALFQITLGDYSYSDLSQTTYPNLSKTVFTVFMIFVPILLLNMLIAMMGNTYAHVIEQSEKEWVKQWAKIVVSLERSVAQDDAHKYLQEYSIGLGPSDDPRYEQRAVMVIKSKAKTRAKQKKDALTNWKHVGKVTIAELRRRGISGEELRRLMWGRISISTPTKAPLPRRVPAPPPDCVVSSDVGLASDVGNGVAPALSSALNVMAFTHELDIGTTGSDQKQTTPDLLVNGKTSNAPILTTGTQMPKVSSKTLGTPVARIEASSLKTPLDVKLNPTTLTQSTVQGNIGNVNIPISGVKITTNVGQNSAVVPEIQQSNENQKPEQVHQDYLRELIVLAEKPATTNLELKQLAEKAADLRDVPEIDININVS

Similarity

Belongs to the transient receptor (TC 1.A.4) family.

Uniprot

H9J469   A0A2W1BP56   A0A2A4JYR0   A0A212F2U8   A0A194Q759   A0A194QQN8   + More
A0A2H1W9C4   F4WYD6   E2BHT3   A0A158NXN7   A0A151WPP2   A0A087ZPY6   D6X1X3   A0A195B0K6   A0A2D3C336   K7IWA0   A0A0L7RJR1   A0A195EVS4   E0W1R2   E2AXW0   A0A154NY96   A0A310SLY8   A0A232FJA6   T1HDJ1   A0A384THG1   A0A3L8E411   A0A195EDX7   A0A151INR2   U4TXE5   A0A1B0DB04   N6U8L1   A0A1I8MW96   A0A3B0KRT7   A0A026WJG3   A0A1A9UDZ9   A0A1B0BB69   Q29IL6   A0A0L0BL70   A0A1A9WL64   A0A1I8NP90   B3NXW2   B4I049   Q9W3W0   B4L526   B4PZ84   B4M701   A0A1W4UW54   B4JLU9   A0A1A9ZQC7   A0A0M4ERE6   A0A067RC69   A0A182YCS3   A0A182P182   A0A182RKY4   U5EG67   A0A182KAD1   A0A2D3C338   A0A1S4FM61   Q16WC0   A0A1Q3FSY0   B0X3V3   A0A182SDK7   A0A182GRZ1   A0A182N0L1   A0A182W5T4   A0A182LY80   A0A0A9Y583   A0A0M9A4X0   J9JUJ3   A0A336MUD6   A0A226DJ08   A0A1D2MQE6   A0A1J1HMG2   A0A0P6CKS2   E9FVS1   T1GKP7   A0A2P8Z3M5   A0A0K2T5U3   T1IMS0  

Pubmed

19121390    28756777    22118469    26354079    21719571    20798317    + More
21347285    18362917    19820115    20075255    20566863    28648823    30249741    23537049    25315136    24508170    15632085    17994087    26108605    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    24845553    25244985    17510324    26483478    25401762    27289101    21292972    29403074   

EMBL

BABH01032522    KZ150034    PZC74646.1    NWSH01000349    PCG77161.1    AGBW02010674    + More
OWR48059.1    KQ459460    KPJ00835.1    KQ461181    KPJ07664.1    ODYU01007165    SOQ49705.1    GL888440    EGI60788.1    GL448324    EFN84766.1    ADTU01003256    ADTU01003257    ADTU01003258    ADTU01003259    KQ982851    KYQ49872.1    KQ971371    EFA10736.2    KQ976692    KYM77734.1    MF684873    ATU07274.1    KQ414579    KOC71074.1    KQ981958    KYN31994.1    AAZO01007084    DS235873    EEB19644.1    GL443736    EFN61724.1    KQ434782    KZC04593.1    KQ762788    OAD55522.1    NNAY01000165    OXU30387.1    ACPB03005165    KX249698    AOR81475.1    QOIP01000001    RLU27431.1    KQ979074    KYN23007.1    KQ976914    KYN07104.1    KB631698    ERL85467.1    AJVK01000574    AJVK01000575    AJVK01000576    AJVK01000577    APGK01038500    KB740960    ENN76991.1    OUUW01000011    SPP86638.1    KK107168    EZA56187.1    JXJN01011311    CH379063    EAL32637.1    JRES01001701    KNC20855.1    CH954180    EDV47413.1    CH480819    EDW52880.1    AE014298    AAF46203.1    CH933811    EDW06285.2    CM000162    EDX01051.1    CH940653    EDW62568.2    CH916371    EDV91710.1    CP012528    ALC48690.1    KK852801    KDR16309.1    GANO01003572    JAB56299.1    MF684872    ATU07273.1    CH477570    EAT38898.1    GFDL01004387    JAV30658.1    DS232323    EDS40030.1    JXUM01083500    KQ563380    KXJ73944.1    AXCM01006171    GBHO01017341    JAG26263.1    KQ435746    KOX76526.1    ABLF02035466    UFQT01002378    SSX33335.1    LNIX01000017    OXA45512.1    LJIJ01000688    ODM95297.1    CVRI01000011    CRK89237.1    GDIP01000670    LRGB01002849    JAN03046.1    KZS06144.1    GL732525    EFX88604.1    CAQQ02391715    PYGN01000212    PSN51083.1    HACA01004027    CDW21388.1    JH431094   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000007755    + More
UP000008237    UP000005205    UP000075809    UP000005203    UP000007266    UP000078540    UP000002358    UP000053825    UP000078541    UP000009046    UP000000311    UP000076502    UP000215335    UP000015103    UP000279307    UP000078492    UP000078542    UP000030742    UP000092462    UP000019118    UP000095301    UP000268350    UP000053097    UP000078200    UP000092460    UP000001819    UP000037069    UP000091820    UP000095300    UP000008711    UP000001292    UP000000803    UP000009192    UP000002282    UP000008792    UP000192221    UP000001070    UP000092445    UP000092553    UP000027135    UP000076408    UP000075885    UP000075900    UP000075881    UP000008820    UP000002320    UP000075901    UP000069940    UP000249989    UP000075884    UP000075920    UP000075883    UP000053105    UP000007819    UP000198287    UP000094527    UP000183832    UP000076858    UP000000305    UP000015102    UP000245037   

PRIDE

H9J469    Q9W3W0   

Pfam

PF00520   Ion_trans        + More
PF00023   Ank
PF00188   CAP
PF12796   Ank_2

Interpro

IPR002110   Ankyrin_rpt        + More
IPR024862   TRPV       
IPR005821   Ion_trans_dom       
IPR020683   Ankyrin_rpt-contain_dom       
IPR036770   Ankyrin_rpt-contain_sf       
IPR020846   MFS_dom       
IPR014044   CAP_domain       
IPR035940   CAP_sf       
IPR002413   V5_allergen-like       

SUPFAM

SSF48403   SSF48403        + More
SSF55797   SSF55797       

Gene 3D

1.25.40.20     3.40.33.10    

CDD

cd00204  ANK
cd06174  MFS

ProteinModelPortal

H9J469   A0A2W1BP56   A0A2A4JYR0   A0A212F2U8   A0A194Q759   A0A194QQN8   + More
A0A2H1W9C4   F4WYD6   E2BHT3   A0A158NXN7   A0A151WPP2   A0A087ZPY6   D6X1X3   A0A195B0K6   A0A2D3C336   K7IWA0   A0A0L7RJR1   A0A195EVS4   E0W1R2   E2AXW0   A0A154NY96   A0A310SLY8   A0A232FJA6   T1HDJ1   A0A384THG1   A0A3L8E411   A0A195EDX7   A0A151INR2   U4TXE5   A0A1B0DB04   N6U8L1   A0A1I8MW96   A0A3B0KRT7   A0A026WJG3   A0A1A9UDZ9   A0A1B0BB69   Q29IL6   A0A0L0BL70   A0A1A9WL64   A0A1I8NP90   B3NXW2   B4I049   Q9W3W0   B4L526   B4PZ84   B4M701   A0A1W4UW54   B4JLU9   A0A1A9ZQC7   A0A0M4ERE6   A0A067RC69   A0A182YCS3   A0A182P182   A0A182RKY4   U5EG67   A0A182KAD1   A0A2D3C338   A0A1S4FM61   Q16WC0   A0A1Q3FSY0   B0X3V3   A0A182SDK7   A0A182GRZ1   A0A182N0L1   A0A182W5T4   A0A182LY80   A0A0A9Y583   A0A0M9A4X0   J9JUJ3   A0A336MUD6   A0A226DJ08   A0A1D2MQE6   A0A1J1HMG2   A0A0P6CKS2   E9FVS1   T1GKP7   A0A2P8Z3M5   A0A0K2T5U3   T1IMS0  

PDB

6E2F     E-value=1.23701e-45,     Score=465

KEGG

101737437    K04975 transient receptor potential cation channel subfamily V member 6 | (RefSeq) uncharacterized L

GO

GO:0016021   GO:0005216   GO:0005887   GO:0005262   GO:0006811   GO:0007628   GO:0001964   GO:0043052   GO:0040040   GO:0048060   GO:0009408   GO:0010996   GO:0050884   GO:0007605   GO:0048148   GO:0007608   GO:0006816   GO:0034703   GO:0006812   GO:0005261   GO:0016020   GO:0005515   GO:0005856   GO:0004890   GO:0043564   GO:0006418   GO:0003824   GO:0055085  

PANTHER

PTHR10582  

Length:

953

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

111.95983

Exp number, first 60 AAs:

0.00103

Total prob of N-in:

0.20873

outside

1  -  478

TMhelix

479  -  497

inside

498  -  505

TMhelix

506  -  528

outside

529  -  542

TMhelix

543  -  565

inside

566  -  609

TMhelix

610  -  632

outside

633  -  953

 

 

Pi

36.1316

Theta

17.282916

Tajima's D

-1.89902

CLR

2922.732244

CSRT

0.0209989500524974

Interpretation

Possibly Positive selection