Silkworm Genome Informatics Database

Gene

KWMTBOMO12041

Annotation

PREDICTED:_uncharacterized_protein_LOC106113712_[Papilio_xuthus]

Location

Bomo_Chr20(-):6214176-6218709 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.659

CDS

ATGAATGAAAAGAAATTGTGCTTCGTGTTTAGAGCTGTAGGTGGTCGTAGAGAAGAGATCGCCCACATTAAAGCTGCAAGACCCTTGTGTATTCAACATGCTGCGTCAGGGAGAACGGCTCAAGTAGAACACTCATTATTTGTTGTAGGTCCTGGAACCGGAGCCGAAGTTGAAAGTACTCCTACTGTACAAAAATCCGAAAAAAAGGCTAGACCTAAAACAACGCGATCTAGACGAAACAGAATATCTCCAACACCGGTACAAGAAGCGGGCAGCCCTTTGGAGCCCTGGGCCACAGCACAACTATCGAAGCTATCACGTCTCATACGCTATTCCAGCTCATCAGCAGCTTCTATCACCTCGCAGACGTCCACGGAACAGGAGCAATCGCCAAGATACTGA

Protein

MNEKKLCFVFRAVGGRREEIAHIKAARPLCIQHAASGRTAQVEHSLFVVGPGTGAEVESTPTVQKSEKKARPKTTRSRRNRISPTPVQEAGSPLEPWATAQLSKLSRLIRYSSSSAASITSQTSTEQEQSPRY

Similarity

Belongs to the transient receptor (TC 1.A.4) family.

Uniprot

A0A194Q759 A0A194QQN8 A0A2H1WFK0 A0A2A4JYR0 S4NVR9

Pubmed

26354079 23622113

EMBL

KQ459460 KPJ00835.1 KQ461181 KPJ07664.1 ODYU01008315 SOQ51797.1 + More
NWSH01000349 PCG77161.1 GAIX01012842 JAA79718.1

Proteomes

UP000053268 UP000053240 UP000218220

Pfam

PF00520 Ion_trans

Interpro

IPR005821   Ion_trans_dom        + More
IPR036770   Ankyrin_rpt-contain_sf
IPR020683   Ankyrin_rpt-contain_dom
IPR024862   TRPV
IPR002110   Ankyrin_rpt

SUPFAM

SSF48403 SSF48403

Gene 3D

1.25.40.20

CDD

cd00204 ANK

ProteinModelPortal

A0A194Q759 A0A194QQN8 A0A2H1WFK0 A0A2A4JYR0 S4NVR9

KEGG

101737437 K04975 transient receptor potential cation channel subfamily V member 6 | (RefSeq) uncharacterized L

GO

GO:0005216 GO:0016021

PANTHER

PTHR10582

Length:

133

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0003

Exp number, first 60 AAs:

0.00012

Total prob of N-in:

0.14835

outside

1 - 133

Pi

205.613608

Theta

152.892968

Tajima's D

1.352112

CLR

135.29599

CSRT

0.749562521873906

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics