Gene

KWMTBOMO12039  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004315

Annotation

PREDICTED:_P-element_somatic_inhibitor_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr20(+):6195620-6211587      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.39

CDS

ATGAGTGATTATTCTTCTATGGCTACGCTCCAAAATAATAGTCAAACGGCGGGATACGCGACTGCTGTACAACGTGCGAGACAGGTAGCTGCTAAGATTGGTGGTGGTAGCAAGAGGCCATTGGAAGACGGACCAGAACCAACACCAAAGAAATTAGCACCAGTTGAGCCGGTTTATACACCACAACCTCCAGTTATGAATTTTGTTGACAGTGTATCGCCAGTTGCGGTTGGTGGTGGCGGACGTATGATAGCAGGTGCGGGCCCTGGCAGTGGACCAACAAATTTATTGCCCGATCAGAGCATCAATGAATACATCAGAGTACCTGATCGTATGGTTGGACTAATAATTGGACGTGGTGGAGAACAAATCACCAGACTGCAAGCAGAATCCGGTTGCAAGATACAAATGGCACCACCCACTGATGGAAATCCTGATAGGCTATGCACGCTTACTGGTTCTAGAGATGCTATACAGAGAGCTAAAGAATTAGTGAACCAAATTGTGAATCATCGAGGAAGGGAGAACGCTCCACAACATCAAGACCCTTCAGAACCTGGAATGAACATGAGCAGGCCAGGCCCTAATGCAATGGAAGAGATCATGATCCCCGGCGCCAAAGTTGGCCTGATCATTGGCAAGAATGGCAAAACAATAAAACAACTCCAAGAACAAACTGGAGCCAAGATGGTCGTAATACAGGATGGACCTAATGAAAATTCATTTAAACCGCAGGAGAAGCCTTTGCGTATATCCGGCGATCCGGCCAAGGTTGAGCACGCGAAGCAGCTCGTGTTCGAGCTCCTCGCCAACAAGGACATGCAGGAGCCGCCGCGCCCCTACGACGACGGCTACGGCGGCTCCGACCCCGGGAACGGACTCGCCACCACTTCCGCTGAGGTTTTAGTCCCAAAAGTGGCTATTGGTGTTGTAATCGGCCATAAGGGTAAAATGATAAAGAAGATACAAGCGGACACCGGATGTAGGGTCCAGTTCAATCAAGAGCATGATGAGGAACCAGGGGATAAACTATGCTACTTGCAGGGGAAACCCCATCAGCTAGATCAAGCTCGTCAGATGATCGAAGATCTTATATCTAGTGTCAAAAGATGTGAGGAGGACAGTCGGAGCCGTGCAGTACGCGGTCAGGGCCAGCAGAACGGCGACAGGGGCGGCATGGAGTACGGGCAGCAGTGGCCCGACCGACCAGAGATGCGCGTCACCTTCACCATCCACGGACCCAAGTGCGGCCTGGTCATTGGCAGAGGTGGTGAAATCATAAAGCAAATAAACGCTCAGTCCGGAGCCCACTGCGAACTAGACAGGAGATGCCAGAGTAATGACAGGAACACAAGGACGTTTATAATCAGAGGACATCCAGAAGCAGTTGAGACTTGTAAACGAATTATCATGGAGAAAGTTGGTGGGCCTGTCAACTTTATCCCGGAAGGCAACGGTAACGGCAACGGCAACGGTAACGGGTCCGGCAGCGGCGGCGGCACCCCCGGCCCCGAGTACTACACGGGCGGCACCCCCGCCGCCTGGGGGTACAACCCGCACTGGCACCAGCCGGCCGCCTCACAGGGACCGCAGCAACAAGTGTCAATAAACCCAGCGACGGGTCAACTGGATTATTCACAACAATGGATCGACTACTACCGCTCTGTGGGCCTTGTCCGGGAGGCCGAAGCCATTGAACAGGCTAAAATGCAGCAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAACAACAGCAACAACAACAACAACAGCATCAGCAACAAGAAGAAGCGAGTAATCAGTCATTGGGCGGTAACGACAGCGGCGGTCCCTCCACCCCGCAGCCCACGCAGGACTACAGCGTGCAGTGGGCGGAGTACTACCGCAGCATCGGGAAGGTCAAGGAGGCTGAGGCCATAGAGGCACAGATCAAAATTAAGCAGCAGCAAAACCAACAGCCGCAGCAGATGTCGCAGGCGGAGCTCCCGGGCGAGGAGTCCACGCCGCCCGGGCCCGCGGCGCAGTACGCGCAGTACTCCATGTACCAGGGCGCCATGTACCCCGGCTACTCCGCCTACGGGTACCCGGCCGGCTCCGACCACCAGCAGTGA

Protein

MSDYSSMATLQNNSQTAGYATAVQRARQVAAKIGGGSKRPLEDGPEPTPKKLAPVEPVYTPQPPVMNFVDSVSPVAVGGGGRMIAGAGPGSGPTNLLPDQSINEYIRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPDRLCTLTGSRDAIQRAKELVNQIVNHRGRENAPQHQDPSEPGMNMSRPGPNAMEEIMIPGAKVGLIIGKNGKTIKQLQEQTGAKMVVIQDGPNENSFKPQEKPLRISGDPAKVEHAKQLVFELLANKDMQEPPRPYDDGYGGSDPGNGLATTSAEVLVPKVAIGVVIGHKGKMIKKIQADTGCRVQFNQEHDEEPGDKLCYLQGKPHQLDQARQMIEDLISSVKRCEEDSRSRAVRGQGQQNGDRGGMEYGQQWPDRPEMRVTFTIHGPKCGLVIGRGGEIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGHPEAVETCKRIIMEKVGGPVNFIPEGNGNGNGNGNGSGSGGGTPGPEYYTGGTPAAWGYNPHWHQPAASQGPQQQVSINPATGQLDYSQQWIDYYRSVGLVREAEAIEQAKMQQQQQQQQQQQQQQQQQQQQQHQQQEEASNQSLGGNDSGGPSTPQPTQDYSVQWAEYYRSIGKVKEAEAIEAQIKIKQQQNQQPQQMSQAELPGEESTPPGPAAQYAQYSMYQGAMYPGYSAYGYPAGSDHQQ

Uniprot

A8R081   H9J476   W0IB02   A0A2H1WFS5   A0A194QRQ8   A0A2A4K0F7   + More
A0A194QBM1   A0A212ESL9   W0I6C8   A0A2W1BIG5   D6WRB8   A0A1W4WH50   A0A1W4WIE4   A0A151WL85   A0A1W4W6R1   A0A2A3EJ78   A0A087ZPZ2   A0A1Y1M936   A0A0L7QV82   A0A151IM41   A0A0N0BHV8   F4WQ16   A0A026WJF9   A0A195BMR7   A0A158NXL1   A0A310SEJ9   A0A195FF61   A0A195EDP2   A0A3L8E2X9   A0A0J7L1L9   A0A067RNR0   A0A154PHL1   E2B9Y0   E2A2F8   A0A3R5SSM8   A0A164YT22   A0A1A9XP20   A0A1B0B7F0   A0A1A9WIR6   A0A1A9ZGH3   A0A1A9V8C5   A0A087T3Z9   A0A1Z5KVJ3   A0A0A1XQB8   A0A1Z5L543   A0A1W4Y9T5   A0A3B4CB75   W5UEI4   A0A3B3RKQ3  

Pubmed

19121390    24239545    26354079    22118469    28756777    18362917    + More
19820115    28004739    21719571    24508170    21347285    30249741    24845553    20798317    28528879    25830018    23127152    29240929   

EMBL

AB302394    BAF91871.1    BABH01032517    BABH01032518    BABH01032519    KF419166    + More
AHF81660.1    ODYU01008315    SOQ51796.1    KQ461181    KPJ07665.1    NWSH01000349    PCG77160.1    KQ459460    KPJ00836.1    AGBW02012769    OWR44488.1    KF419167    AHF81661.1    KZ150034    PZC74648.1    KQ971351    EFA06543.2    KQ983001    KYQ48445.1    KZ288227    PBC31777.1    GEZM01036960    GEZM01036959    JAV82312.1    KQ414731    KOC62361.1    KQ977063    KYN05961.1    KQ435746    KOX76541.1    GL888262    EGI63714.1    KK107168    EZA56125.1    KQ976441    KYM86426.1    ADTU01003138    KQ769958    OAD52715.1    KQ981610    KYN39330.1    KQ979074    KYN22927.1    QOIP01000001    RLU26882.1    LBMM01001331    KMQ96498.1    KK852513    KDR22240.1    KQ434910    KZC11341.1    GL446610    EFN87498.1    GL436038    EFN72361.1    MG708331    QAB02871.1    LRGB01000868    KZS15575.1    JXJN01009573    KK113294    KFM59838.1    GFJQ02007925    JAV99044.1    GBXI01000768    JAD13524.1    GFJQ02004437    JAW02533.1    JT413535    AHH40290.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268    UP000007151    UP000007266    + More
UP000192223    UP000075809    UP000242457    UP000005203    UP000053825    UP000078542    UP000053105    UP000007755    UP000053097    UP000078540    UP000005205    UP000078541    UP000078492    UP000279307    UP000036403    UP000027135    UP000076502    UP000008237    UP000000311    UP000076858    UP000092443    UP000092460    UP000091820    UP000092445    UP000078200    UP000054359    UP000192224    UP000261440    UP000221080    UP000261540   

PRIDE

A8R081    H9J476   

Pfam

PF00013   KH_1        + More
PF09005   DUF1897
PF01553   Acyltransferase
PF00650   CRAL_TRIO

Interpro

IPR004088   KH_dom_type_1        + More
IPR004087   KH_dom       
IPR036612   KH_dom_type_1_sf       
IPR015096   FUBP_C       
IPR002123   Plipid/glycerol_acylTrfase       
IPR001251   CRAL-TRIO_dom       
IPR036598   GOLD_dom_sf       
IPR009038   GOLD_dom       
IPR036865   CRAL-TRIO_dom_sf       

SUPFAM

SSF54791   SSF54791        + More
SSF101576   SSF101576       
SSF52087   SSF52087       

Gene 3D

3.30.1370.10     3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

A8R081   H9J476   W0IB02   A0A2H1WFS5   A0A194QRQ8   A0A2A4K0F7   + More
A0A194QBM1   A0A212ESL9   W0I6C8   A0A2W1BIG5   D6WRB8   A0A1W4WH50   A0A1W4WIE4   A0A151WL85   A0A1W4W6R1   A0A2A3EJ78   A0A087ZPZ2   A0A1Y1M936   A0A0L7QV82   A0A151IM41   A0A0N0BHV8   F4WQ16   A0A026WJF9   A0A195BMR7   A0A158NXL1   A0A310SEJ9   A0A195FF61   A0A195EDP2   A0A3L8E2X9   A0A0J7L1L9   A0A067RNR0   A0A154PHL1   E2B9Y0   E2A2F8   A0A3R5SSM8   A0A164YT22   A0A1A9XP20   A0A1B0B7F0   A0A1A9WIR6   A0A1A9ZGH3   A0A1A9V8C5   A0A087T3Z9   A0A1Z5KVJ3   A0A0A1XQB8   A0A1Z5L543   A0A1W4Y9T5   A0A3B4CB75   W5UEI4   A0A3B3RKQ3  

PDB

2JVZ     E-value=2.83265e-26,     Score=297

KEGG

100126539    K13210 far upstream element-binding protein | (RefSeq) Psi, BmPSI; P-element somatic inhibitor

GO

GO:0006355   GO:0003723   GO:0016746   GO:0003676   GO:0016021   GO:0022891   GO:0005856   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Length:

703

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00761000000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00024

outside

1  -  703

 

 

Pi

204.832265

Theta

178.081225

Tajima's D

0.585833

CLR

0.327089

CSRT

0.547272636368182

Interpretation

Uncertain