Silkworm Genome Informatics Database

Gene

KWMTBOMO12037 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004309

Annotation

PREDICTED:_protein_DEK_isoform_X2_[Papilio_xuthus]

Location

Bomo_Chr20(-):6168377-6182619 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.876

CDS

ATGACAAAGCTCACTGTTGAAGTATGGAGTGTGTACAGAGCAGAGAAAGTCTATCCAGTATCCAGCTCGGAAGTTCCAACAAAAATAGTGAAGAAGCCGGCAAAAAAAGCAAAGGGCGATGACGATGAAGGTGATGATGATGAAGGTGAAGAGGACGAAGAAGAGGAGGAGGAAGAGGAAGAAGAGGAGGAGGAAGCTCCTAAACCCAAGCCCAAGAGAGAGCCTACGGAGCCGCCGGTACCGCTACCCGCTGGAAAAGGTATCCCGCTCGGGCACATCAGCAATGTGGAAGTATCGTTGTCGCGATTCAAGACCCAAGATCAGAAACTACTACATCAGTATTTGTATGGGCAACTTTGCCTGGATCGTAATGTTAAACGCAACATCAAGAAGTTCAAAGGCTACGAATGGGCAATCGGCTCGTCCGACTACAAGGCTAAACTGGAGGAGACCACCAAGATGGAACCCAAACAGTTGCGTACAATGTGCGAAATGCTTGATTTGGATAAAAAAGGGTCGGCGTCGGAGCTGGCGGGGCGGCTGGTGGGGTTCCTGCAGCAGCCCACCGCCAACAGTCCGCACGCGCGCGGCGTGGCGCGGCCCCCGCCCGCCCCCACCTCCACGCCCGGCGGCCGGCCCCGGAGGTCCGCCGCCGTCAAGGTGCATAACAGAGGTTACTCTGATGAAGAATATGAAACTGATCCAGAACCGAAAGTCAAAGGGCCGAAGCCCACTAAAGAAGGTTCCGAAGATTCAGACGGTTCATTCAACCCGAGTGGCTCGGAGGAGGCGGATTCGGACTTTGATCCTGAAGCCGGTGAGGGTGTCGCGAAGAAACGTGCGCCGCGGAGACGATCCGCCGGGAAACCCACCAAACGGTCCTCCAAGAAGGGCAGCAGCAAGGGGAAGAAAGGAAAGCAGGCTAAACCGAGTCGCGGCAGACGAGCAAAGTCCGAAAGCGACGAGGAAAGTGAAAAATCTGAGAGTGAAAGCGACGCAGAGTCCGGTAGCGACGGAGAGGAATCAGATGAGCCTAAAGCGAAGCGAGGACGGCCATCGGTGGTAGCTAAGGGACGCAAGGGTCCGGTCGCAAAGAATTCTAAAGCAACGCCCGTAAAACGGAAAGCACCTACGCCACCTGCTAAAAAGAAGGCGGTAGCTGGTAAAGCCGCAGCAGGTCGACCGGCCAAGAAGGGGAAGAAGGCTTCGTCCGACGAAGAGTCTGGCGACGGAAGCGAGGAGGATGACGACGAGGAGGAGGCCAGCGACGACGAGAGCGGAGACGACTCGGACGCGCCGACCGACAAGAAGGCTAAACGACCGCCTACTGATGAAGAAATAAAGAAGTACGTGAAGCAGATCCTGGAGGGCGCGAACCTCGAGCAGATCACTATGAAGACTGTTTGCAAGCAGGTCTACAGCCACTACCCGGACTTTGACCTCGCGCACAAGAAGGACTTCATCAAGGCCACGGTCAAGTCGTGTATTTAA

Protein

MTKLTVEVWSVYRAEKVYPVSSSEVPTKIVKKPAKKAKGDDDEGDDDEGEEDEEEEEEEEEEEEEAPKPKPKREPTEPPVPLPAGKGIPLGHISNVEVSLSRFKTQDQKLLHQYLYGQLCLDRNVKRNIKKFKGYEWAIGSSDYKAKLEETTKMEPKQLRTMCEMLDLDKKGSASELAGRLVGFLQQPTANSPHARGVARPPPAPTSTPGGRPRRSAAVKVHNRGYSDEEYETDPEPKVKGPKPTKEGSEDSDGSFNPSGSEEADSDFDPEAGEGVAKKRAPRRRSAGKPTKRSSKKGSSKGKKGKQAKPSRGRRAKSESDEESEKSESESDAESGSDGEESDEPKAKRGRPSVVAKGRKGPVAKNSKATPVKRKAPTPPAKKKAVAGKAAAGRPAKKGKKASSDEESGDGSEEDDDEEEASDDESGDDSDAPTDKKAKRPPTDEEIKKYVKQILEGANLEQITMKTVCKQVYSHYPDFDLAHKKDFIKATVKSCI

Uniprot

NA

ProteinModelPortal

NA

PDB

1Q1V E-value=9.98216e-14, Score=187

KEGG

101736883 K17046 protein DEK | (RefSeq) protein DEK-like

GO

GO:0003677 GO:0008270 GO:0016021 GO:0022891 GO:0005856 GO:0004890 GO:0005216 GO:0043564 GO:0006418 GO:0003824

Length:

496

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00350

outside

1 - 496

Pi

301.110668

Theta

188.620855

Tajima's D

1.121189

CLR

0.470522

CSRT

0.692215389230538

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
31250652	EENLEGSASELAGR	100.00	5e-09
26822097	GYEWAIGSSDYK	100.00	4e-05
26280517	GQCGHFVIEEPMIMGHEASGVVAK	100.00	4e-05
25044914	GVARPPPAPTSTPGGR	100.00	4e-05
28467696	GVARPPPAPTSTPGGR	100.00	4e-05
28556443	VALASDAFFPFR	100.00	1e-04
26280517	FIYVWDTTSR	100.00	3e-04
27102218	IVGFIQQPTANSPHAR	100.00	3e-04
28467696	FKGNYGDDISFEIAGVR	100.00	3e-04
28556443	LVGFLQQPTANSPHAR	100.00	3e-04
28556443	GYEWAIGSSDYK	100.00	3e-04
28556443	GYEWAIGSSDYK	100.00	3e-04
26280517	GTTFHAIFG	100.00	7e-04
25044914	GVAIWAGPK	100.00	7e-04
28467696	GVAFVISR	100.00	7e-04
28556443	GIPLGHISNVEVSLSR	100.00	7e-04
26280517	GYSCHETGTAVVIQGPR	100.00	0.005
26822097	GIPIGHISNVEVSISR	100.00	0.008
26280517	GYAINCTVASQAMPK	100.00	0.008
25044914	GYEVVYMTEPIDEYVVQQMR	100.00	0.008
27102218	FKGYEWAIGSSDYK	100.00	0.008
28467696	GYEVVYMTEPIDEYVVQQMR	100.00	0.008
28556443	EENLEGDVK	100.00	0.008
28556443	GVARPPPAPTSTPGGR	100.00	0.008

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics