SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12036
Pre Gene Modal
BGIBMGA004314
Annotation
PREDICTED:_uncharacterized_protein_LOC101742588_[Bombyx_mori]
Location
Bomo_Chr20(+):6150780-6163237      View in EpiBrowser
Full name
XK-related protein      
Location in the cell
PlasmaMembrane   Reliability : 2.399
 

Sequence

CDS
ATGGCTGAGTTCCTGCCTCTGTGTGATGTCCTCTTCAATGTTATCTCCCTTGCGGGATATTTCTGCGATGTTGTATTCGACGTTGTAATGGGTTACGCATTGCTTGAACGAGGATACAAGGGCACCTTCGCGGCTGCCATATCAATAGTCATCACCTCACTTTTAATATCACAGGTTCTCTCTCTTCGTTGGTACCTGCATGTTTGGTGGGCAAGTGAAGGTAGGAAAGACCGACCTCCTTGGCTTCCCATCCTATTGCATTGCTTGCAACTGGGTGTCCTATGGAGATATGCTCGCCTGCTAGTGCCAGTCGAACTCAGAAGGGTCAAACATCAGGTCAGGGATTTGTGTATGCTGCGGCTAGTCCACGCCTTTTGCGAGGCGGCCCCTATGCTATTGCTCCAACTTCACATCCTGTTCAAAGACACTGCCTACCAGGATCTTCAGGAGACCGCCAACGAGCTAGGAATAACTCCAGAACCTAGCATAGATGAACCTGCAGCAAACAAGGCATTCGCAGAATTAAACGTGATATCAGCATCGTTGTCATTGTTCTCCGTGTGCTGGGCTTTAGCTAGCTTCAGTAAAAATGTGCGCCTGCAAAATGTACACCGACTCGTATTGACATGGCTCGGAGTTATATTTCAGTTCCTATGGCGTTTGGGAACGGTATCGGCACGAATTTGCGCGCTAACAGTCTACGCTCTAGTCTATGAATATTGGGTATTCTTAGTTATAGGTCTCCATTGGCTATCGATGTTTCTGTGGTTGATATCGCCAAAGAACGTGTTCCACGGTGAGAGGATAAGCCGACCGAGGAAGGCCTGTCTCTCGGCCCTCATAGCGTTCCTCTACGTCTTCGCTTACGTTAATCTGCATGAGCACAACCATAGACAAAAAATGGTGACGTTCTACAGTGTGATGTGCATAGAGAATACACTGCTGGTGGTGTCGTGGTGGTGGTCAGGGAGAGGCGCGGGCTCTCTGGTGGCGGGAGCCGCGGGATCCTTCATCGCTGGGATCGGATTCATGCTCCTCTACTATAGGTATTTCCACGTGAGGAGGCTGGGGTACATGCTGGGTGAGAACCAGCAAGGCACAAACAGCACTAACGCATCGACGCAAAGCAAAAACGGTAAACCGTCCAGTCCCGGAGACAATGTGGCGATACCAGGTGTTTTTAACTGCCGTTTTACCAACCCAGTTAATAATAGTGCAGCAAACGGCCGTAAGAAGAAGAAGCCGACGTCGTTCGTGCCTCCCCCCGCGCACCCCCCCGCGGCTCACCCCGCGCCCCTCCCCGCGCACTCCTCTGCCGCCTTCTGGAGACGCCCGCTGGCCGGCGCACATCCACATCACGGAGGCTCGTCGGAGAACGAGGGATCAAGCGTCGGATCCCGCGTCAACATACAGCAAAAGTTACAGGAGAAGAAACAAAAGCAGCTCGCCGAACTGCGCGTCATAGAGGAGGAGATCAAACAGGGCAAGCTCGCCAAGACGACGCCCGTCGCCGCCGAGGAGATCTACAGCAGCCTCCAGAGGCAACCGATACCGAGGGCGAAGACGCACGCCGAGCCCCCGCCCTGGCCCTCCATAGAACTCACGCACTCCTACCAGAACTACCCGGTGCTGCCTCACAACTGCGGCCTCTACCCTGCCTACACGGATAAACAAGACTTCGGCGCACAGAACAATGAGGACGCGAACGATCTAAAGATGAGGAGGATACAGAATCGATACGAAAACAGAACGTTCTATGAGAGTCCGGCCGGTGCCAGGAGCGAGGGCAGACCGCCGCTGCGTTCACCGAACTATATCGACAACAGGACCTACGACAGCAACTGCGCCAGTCCCAGGACCCTCAATAGTCCCGGGAACTACATAGCCGACGTCGCCAGTACTAACTACGACGCCATAGACAAACCCCGAAACGGCCTGTACAGCGAGGAGCATAGACAATTAGGAGAATATTCCGGTTACTGCGAAAACAATCAGTACAAGTACGAAGGGAAAGACGAGTACGCGTCCGCCTTGCATAACGCTTTATCGAACGTCCAGACCATAGATAATATGCGGAGTTATAACGAGAGCGGTGCGCAGTATGGCCAGAACTGTGAAAGGTTCGTGTATTCAGGGTTGCCCGGAAAGAAAATGGAACAGATCAGGAAAATGCAGAGGTGCAGGACTCCTGAGATATTATTGGCGCCCCATTATTTGGAGGGCTGCAATAGACAAGTGTGCTGTCAATGGGGACCCCCGTATGGTAACAGGAAGAAAGAGGACGGTGCTCCGGCCAGTAGCGGGGAGGAGTCCAGTCCCGACGGACAGAACCGGGAGACGCCGCGGCCGCCCAGCGACATCGATAGTCAGATATCTTTACCACGATCGTATACCTTGCCGAGGGAGTTTCGTTACTGGCGCAGAAGGCCCCGCCTCAGGGACGCGCACGTGCCCAGCAACAACAGCAGTGACGGAGACGTGGACAGCGCAGATAACGACAGCGATCGTCGTTCGAATTGTTCGGCGACTTCACAGATCCAAAGTCCAACTTACGGTGAGGCGTACCAGTACCAACCCCGCCCGGACCTGTACGGGGCATGTCCGCCCCGTACCAGACGGACGCACGGATACAGGAAACAAGTGCCTAAACCAGAGACAAAGTTATAG
Protein
MAEFLPLCDVLFNVISLAGYFCDVVFDVVMGYALLERGYKGTFAAAISIVITSLLISQVLSLRWYLHVWWASEGRKDRPPWLPILLHCLQLGVLWRYARLLVPVELRRVKHQVRDLCMLRLVHAFCEAAPMLLLQLHILFKDTAYQDLQETANELGITPEPSIDEPAANKAFAELNVISASLSLFSVCWALASFSKNVRLQNVHRLVLTWLGVIFQFLWRLGTVSARICALTVYALVYEYWVFLVIGLHWLSMFLWLISPKNVFHGERISRPRKACLSALIAFLYVFAYVNLHEHNHRQKMVTFYSVMCIENTLLVVSWWWSGRGAGSLVAGAAGSFIAGIGFMLLYYRYFHVRRLGYMLGENQQGTNSTNASTQSKNGKPSSPGDNVAIPGVFNCRFTNPVNNSAANGRKKKKPTSFVPPPAHPPAAHPAPLPAHSSAAFWRRPLAGAHPHHGGSSENEGSSVGSRVNIQQKLQEKKQKQLAELRVIEEEIKQGKLAKTTPVAAEEIYSSLQRQPIPRAKTHAEPPPWPSIELTHSYQNYPVLPHNCGLYPAYTDKQDFGAQNNEDANDLKMRRIQNRYENRTFYESPAGARSEGRPPLRSPNYIDNRTYDSNCASPRTLNSPGNYIADVASTNYDAIDKPRNGLYSEEHRQLGEYSGYCENNQYKYEGKDEYASALHNALSNVQTIDNMRSYNESGAQYGQNCERFVYSGLPGKKMEQIRKMQRCRTPEILLAPHYLEGCNRQVCCQWGPPYGNRKKEDGAPASSGEESSPDGQNRETPRPPSDIDSQISLPRSYTLPREFRYWRRRPRLRDAHVPSNNSSDGDVDSADNDSDRRSNCSATSQIQSPTYGEAYQYQPRPDLYGACPPRTRRTHGYRKQVPKPETKL

Summary

Similarity
Belongs to the XK family.
Uniprot
H9J475   A0A194QQ92   A0A212ESL3   A0A240SY32   A0A1L8D9V3   J9KA82   + More
A0A2S2NPG1   A0A0N8EJC3  
Pubmed
19121390    26354079    22118469   
EMBL
BABH01032513    BABH01032514    KQ461181    KPJ07667.1    AGBW02012769    OWR44485.1    + More
AJWK01030434    GFDF01010947    JAV03137.1    ABLF02039033    GGMR01006446    MBY19065.1    GDIQ01021084    JAN73653.1   
Proteomes
UP000005204    UP000053240    UP000007151    UP000092461    UP000007819   
PRIDE
H9J475   
Pfam
PF09815   XK-related
Interpro
IPR018629   XK-rel        + More
IPR020846   MFS_dom       
CDD
cd06174  MFS
ProteinModelPortal
H9J475   A0A194QQ92   A0A212ESL3   A0A240SY32   A0A1L8D9V3   J9KA82   + More
A0A2S2NPG1   A0A0N8EJC3  

Ontologies

KEGG
101742588    no KO assigned | (RefSeq) uncharacterized LOC101742588
GO
GO:0016021   GO:0008270   GO:0022891   GO:0005856   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Topology

Subcellular location
Membrane  
Length:
888
Number of predicted TMHs:
10
Exp number of AAs in TMHs:
204.16607
Exp number, first 60 AAs:
40.09039
Total prob of N-in:
0.31196
POSSIBLE N-term signal
sequence
outside
1  -  9
TMhelix
10  -  32
inside
33  -  43
TMhelix
44  -  66
outside
67  -  80
TMhelix
81  -  103
inside
104  -  115
TMhelix
116  -  138
outside
139  -  170
TMhelix
171  -  193
inside
194  -  205
TMhelix
206  -  223
outside
224  -  235
TMhelix
236  -  258
inside
259  -  274
TMhelix
275  -  292
outside
293  -  301
TMhelix
302  -  321
inside
322  -  327
TMhelix
328  -  350
outside
351  -  888
 
 

Population Genetic Test Statistics

Pi
252.471346
Theta
213.929483
Tajima's D
0.835476
CLR
0.344742
CSRT
0.612369381530923
Interpretation
Uncertain
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