Gene

KWMTBOMO12029

Pre Gene Modal

BGIBMGA004313

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-like_[Bombyx_mori]

Location

Bomo_Chr20(+):5989021-6016466      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.774

CDS

ATGGGACCCCGGCTGATGGCCTCCGACACCCCTGCCTCGGAACCCGTTCACGCTGACGTAATATCCTGGATGGCTTCCGTGGTTTATCTGGTTGGTACACCTGCGGTTTTCCTGTTCGGATACATCGTTGACAACTATGGGAGAAAGAAGGCTCTGATGCTGACCTCGTTTTCAATGGCTGCATGTTGGGCTTTAAAGCTGTATTCCACGGAGACCTGGGCTCTAATCACGGCACGTGCGATCATCGGCTTAGGGGTCAGCGGCTCGTATGTCGTCACGCCTCTCTACATCAAGGAAATAAGTGAAGATTCCATCAGGGGGACCCTCGGAAGTCTCGTGGTCTTATCGCAAAACCTAGGCAACCTAGCCGTTTATATATTAGGCGAATACCTGAGCTATTACACGACCCTGTGGATATGTTTGGCAGTGCCGCTTTTGCACATGCTTGTGTTCACGACGATGCCCGACACTCCGTCGTACTTACTGAAAAGTGGTAAAGTTGAGGAAGCTCGCGATGCTCTGGCCTGGCTGCGATGCCGCGATAGCTCCGAAGCCGAAGTGGACAGCGAGCTGCAGAAGCTGTTAGTTGAGCTGGAACAAAGCAAATCTGGAAAATTTGTCAGCGCTGTCAAAACTCTAATATCAGACAGAAATACGTTCCGGGCTTTTCGTATAACCCTCGTGATAACTCTGGCTCGAGAGCTTTGCGGTTGCCTAGCCGTGCTACACTTCGCTTCGCTGATATTCAGCAAGGCCAGCTCGGGCTGGGTGTTGACTGCGAACCAGCAGGCCGTGGTGCTGGGCGTCGTGCAACTGATCGGCTCGTGCACCGCATCGACTCTAGTCGAAAGGACTGGTAGAAAGCCTCTACTCGGCACGACGTGTTTAGTGTCTGGTATATCGATGTGCGCGTTAGGAGCGTGGTTCTACGCGCAGAGCGTCAGCGCCACCGGCGTGTCGTGGCTGCCGATAGCGGCGTTATGTTTGTGCATCTATTGTGATGCGGCCGGACTGCAACCCGTGCCTTTCGTTATCATGACCGAAATGTTCTCTTTCCAGCTCCGCGGTACAGTCACTTCAATAGTGATATCGTTCGCGTGTGCTCTAGTATCGGTTGAGCTCCGCGTGTTCCAACCCCTGGCGGCCTCAATGGGTCTCCATATGGTGTTCTGGCTGTTCTCGGCTGTCTGCATCATCAGCACAGTGTACATAGCTTGCATGGTGCCGGAGACAAAAATGCGAACCCTGGACGAGATCTACACTGAAATAGGTGGCAAGAAACAGAAGGATTGCGAGGCAGACGTCACTAAATTGTAA

Protein

MGPRLMASDTPASEPVHADVISWMASVVYLVGTPAVFLFGYIVDNYGRKKALMLTSFSMAACWALKLYSTETWALITARAIIGLGVSGSYVVTPLYIKEISEDSIRGTLGSLVVLSQNLGNLAVYILGEYLSYYTTLWICLAVPLLHMLVFTTMPDTPSYLLKSGKVEEARDALAWLRCRDSSEAEVDSELQKLLVELEQSKSGKFVSAVKTLISDRNTFRAFRITLVITLARELCGCLAVLHFASLIFSKASSGWVLTANQQAVVLGVVQLIGSCTASTLVERTGRKPLLGTTCLVSGISMCALGAWFYAQSVSATGVSWLPIAALCLCIYCDAAGLQPVPFVIMTEMFSFQLRGTVTSIVISFACALVSVELRVFQPLAASMGLHMVFWLFSAVCIISTVYIACMVPETKMRTLDEIYTEIGGKKQKDCEADVTKL

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

A0A2H1WE18   A0A2A4JHM3   A0A194Q5M1   A0A212FI50   A0A3S2L5Q4   A0A194QQ84   + More
H9J4J6   A0A194QB83   A0A3S2TIH7   A0A212FAG2   A0A2W1BRA6   A0A2A4J8P9   A0A2W1BQ47   H9JVU3   A0A2A4J7G4   A0A194Q5F6   A0A2A4JII3   A0A212EX46   A0A212FB89   A0A0N1IIG7   A0A2W1BV28   A0A194Q5B9   A0A2H1WQ53   A0A2H1WGI4   A0A3S2TMD3   A0A2Z5U782   A0A0N0PER8   H9J4P6   A0A212F931   A0A0N1IHX2   A0A0N1PHR0   A0A194Q5G2   A0A212F0G4   A0A2H1WR29   A0A0N0PEG1   A0A2A4JKE4   A0A2W1BSA0   A0A2H1WM77   S4PKR1   A0A0L7LE34   A0A2A4JNL8   A0A146LSN9   A0A182JZA6   A0A182NGP0   A0A182QRF9   A0A182XNP0   A0A182P8A2   A0A182UH29   A0A1S4GZI9   Q7PWP0   A0A182MPL4   A0A2A4J9N1   A0A182TXA5   A0A182I799   A0A182LMV4   A0A182VUC8   A0A182UZ66   A0A1B6CY32   A0A2P8XJ31   A0A1B6DME3   A0A2M3Z412   A0A224XJ44   A0A0L7KVL6   A0A194Q5D6   A0A2H1X046   A0A0A8J8K5   A0A2M3ZH26   A0A2M4BLL7   A0A2M3Z428   A0A2M4CQF1   A0A2M4CQC1   W5JMX1   A0A2M4A741   A0A2M4A739   A0A2J7R8L3   A0A182GVZ3   A0A2M4A7E4   A0A2M4BLK9   A0A084W7N7   A0A182RSI8   A0A182JME0   A0A182GL71   A0A182F539   A0A0A9X9R8   Q16SU3   A0A2J7R8M9   A0A1Q3FRY2   A0A146L3L7   B0WPL1   A0A2P8Z801   K7IP31   A0A2P8ZDM8   A0A1Q3FRU2   A0A182YRN8   A0A1B6GYS0   A0A1B6INA2   A0A195FTD3  

Pubmed

26354079    22118469    19121390    28756777    23622113    26227816    + More
26823975    12364791    20966253    29403074    20920257    23761445    26483478    24438588    25401762    17510324    20075255    25244985   

EMBL

ODYU01008039    SOQ51308.1    NWSH01001423    PCG71276.1    KQ459460    KPJ00847.1    + More
AGBW02008435    OWR53407.1    RSAL01000132    RVE46342.1    KQ461181    KPJ07673.1    BABH01021836    KPJ00686.1    RSAL01000114    RVE46930.1    AGBW02009482    OWR50710.1    KZ149924    PZC77632.1    NWSH01002620    PCG67830.1    KZ149937    PZC77108.1    BABH01040655    NWSH01002833    PCG67464.1    KPJ00782.1    NWSH01001270    PCG71905.1    AGBW02011864    OWR46004.1    AGBW02009367    OWR50987.1    KQ459838    KPJ19742.1    KZ149954    PZC76506.1    KPJ00738.1    ODYU01010219    SOQ55189.1    ODYU01008186    SOQ51574.1    RSAL01000053    RVE50024.1    AP017499    BBB06788.1    KPJ19739.1    BABH01022059    AGBW02009650    OWR50256.1    KQ460009    KPJ18480.1    KQ460654    KPJ12970.1    KPJ00783.1    AGBW02011078    OWR47246.1    ODYU01010429    SOQ55525.1    KPJ19738.1    PCG71903.1    PZC76505.1    ODYU01009532    SOQ54032.1    GAIX01000896    JAA91664.1    JTDY01001495    KOB73737.1    NWSH01001033    PCG73010.1    GDHC01008360    GDHC01004923    JAQ10269.1    JAQ13706.1    AXCN02002080    AAAB01008984    EAA14882.4    AXCM01000345    NWSH01002244    PCG68837.1    APCN01003374    GEDC01018964    JAS18334.1    PYGN01001954    PSN32011.1    GEDC01010470    JAS26828.1    GGFM01002508    MBW23259.1    GFTR01006588    JAW09838.1    JTDY01005298    KOB67145.1    KPJ00762.1    ODYU01012350    SOQ58622.1    AB901068    BAQ02368.1    GGFM01007009    MBW27760.1    GGFJ01004829    MBW53970.1    GGFM01002530    MBW23281.1    GGFL01003355    MBW67533.1    GGFL01003356    MBW67534.1    ADMH02001096    ETN64119.1    GGFK01003296    MBW36617.1    GGFK01003278    MBW36599.1    NEVH01006721    PNF37174.1    JXUM01091986    KQ563956    KXJ73023.1    GGFK01003378    MBW36699.1    GGFJ01004828    MBW53969.1    ATLV01021268    KE525315    KFB46231.1    JXUM01071371    KQ562660    KXJ75380.1    GBHO01026885    GBRD01008360    JAG16719.1    JAG57461.1    CH477665    EAT37545.1    PNF37175.1    GFDL01004852    JAV30193.1    GDHC01015631    JAQ02998.1    DS232026    EDS32412.1    PYGN01000154    PSN52620.1    PYGN01000088    PSN54598.1    GFDL01004839    JAV30206.1    GECZ01003576    GECZ01002212    JAS66193.1    JAS67557.1    GECU01019308    JAS88398.1    KQ981276    KYN43567.1   

Proteomes

UP000218220    UP000053268    UP000007151    UP000283053    UP000053240    UP000005204    + More
UP000037510    UP000075881    UP000075884    UP000075886    UP000076407    UP000075885    UP000075902    UP000007062    UP000075883    UP000075840    UP000075882    UP000075920    UP000075903    UP000245037    UP000000673    UP000235965    UP000069940    UP000249989    UP000030765    UP000075900    UP000075880    UP000069272    UP000008820    UP000002320    UP000002358    UP000076408    UP000078541   

PRIDE

H9J4J6    H9JVU3    H9J4P6   

Pfam

PF00083   Sugar_tr        + More
PF00025   Arf
PF05225   HTH_psq

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR003663   Sugar/inositol_transpt       
IPR020846   MFS_dom       
IPR036259   MFS_trans_sf       
IPR005829   Sugar_transporter_CS       
IPR006689   Small_GTPase_ARF/SAR       
IPR027417   P-loop_NTPase       
IPR009057   Homeobox-like_sf       
IPR007889   HTH_Psq       

SUPFAM

SSF103473   SSF103473        + More
SSF52540   SSF52540       
SSF46689   SSF46689       

CDD

cd06174  MFS

ProteinModelPortal

A0A2H1WE18   A0A2A4JHM3   A0A194Q5M1   A0A212FI50   A0A3S2L5Q4   A0A194QQ84   + More
H9J4J6   A0A194QB83   A0A3S2TIH7   A0A212FAG2   A0A2W1BRA6   A0A2A4J8P9   A0A2W1BQ47   H9JVU3   A0A2A4J7G4   A0A194Q5F6   A0A2A4JII3   A0A212EX46   A0A212FB89   A0A0N1IIG7   A0A2W1BV28   A0A194Q5B9   A0A2H1WQ53   A0A2H1WGI4   A0A3S2TMD3   A0A2Z5U782   A0A0N0PER8   H9J4P6   A0A212F931   A0A0N1IHX2   A0A0N1PHR0   A0A194Q5G2   A0A212F0G4   A0A2H1WR29   A0A0N0PEG1   A0A2A4JKE4   A0A2W1BSA0   A0A2H1WM77   S4PKR1   A0A0L7LE34   A0A2A4JNL8   A0A146LSN9   A0A182JZA6   A0A182NGP0   A0A182QRF9   A0A182XNP0   A0A182P8A2   A0A182UH29   A0A1S4GZI9   Q7PWP0   A0A182MPL4   A0A2A4J9N1   A0A182TXA5   A0A182I799   A0A182LMV4   A0A182VUC8   A0A182UZ66   A0A1B6CY32   A0A2P8XJ31   A0A1B6DME3   A0A2M3Z412   A0A224XJ44   A0A0L7KVL6   A0A194Q5D6   A0A2H1X046   A0A0A8J8K5   A0A2M3ZH26   A0A2M4BLL7   A0A2M3Z428   A0A2M4CQF1   A0A2M4CQC1   W5JMX1   A0A2M4A741   A0A2M4A739   A0A2J7R8L3   A0A182GVZ3   A0A2M4A7E4   A0A2M4BLK9   A0A084W7N7   A0A182RSI8   A0A182JME0   A0A182GL71   A0A182F539   A0A0A9X9R8   Q16SU3   A0A2J7R8M9   A0A1Q3FRY2   A0A146L3L7   B0WPL1   A0A2P8Z801   K7IP31   A0A2P8ZDM8   A0A1Q3FRU2   A0A182YRN8   A0A1B6GYS0   A0A1B6INA2   A0A195FTD3  

PDB

4LDS     E-value=6.3729e-25,     Score=283

KEGG

101742153    K08145 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member

GO

GO:0016021   GO:0022857   GO:0008643   GO:0005525   GO:0005351   GO:0005887   GO:0003677   GO:0016020   GO:0022891   GO:0005856   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824   GO:0055085  

Length:

438

Number of predicted TMHs:

9

Exp number of AAs in TMHs:

204.04432

Exp number, first 60 AAs:

24.48106

Total prob of N-in:

0.08849

POSSIBLE N-term signal

sequence

outside

1  -  19

TMhelix

20  -  42

inside

43  -  74

TMhelix

75  -  97

outside

98  -  129

TMhelix

130  -  152

inside

153  -  226

TMhelix

227  -  249

outside

250  -  263

TMhelix

264  -  282

inside

283  -  288

TMhelix

289  -  311

outside

312  -  320

TMhelix

321  -  343

inside

344  -  349

TMhelix

350  -  372

outside

373  -  386

TMhelix

387  -  409

inside

410  -  438

 

 

Pi

188.802508

Theta

152.925481

Tajima's D

0.90046

CLR

0.200035

CSRT

0.630368481575921

Interpretation

Uncertain