Gene

KWMTBOMO12020

Annotation

PREDICTED:_longitudinals_lacking_protein-like_[Plutella_xylostella]

Location

Bomo_Chr20(-):5649336-5655340      View in EpiBrowser

Full name

Longitudinals lacking protein-like      

Alternative Name

Protein Batman

Location in the cell

Cytoplasmic   Reliability : 1.348 Extracellular   Reliability : 1.811

CDS

ATGGGTGATCAACAATTCTTTTTAAAATGGAACGATTTTCAAACTAACATGGTGACTTCGTTCAGACATTTGAGAGACGAAAAAAGTTTTACAGATGTTACATTAGCATGTGAAGGACAGACGTGTAAGGCACATAAAATGGTTCTCTCTGCCTGTAGTCCGTACTTCAAAAGTCTATTAGAGGAAAATCCATCGAAACATCCGATAATAATTCTAAAAGACGTGTCTTATCTACATCTGCAAGCCATTTTAGAGTTCATGTACGCCGGCGAAGTTAATGTTTCACAGGAACAGCTGCCGGCCTTCCTCAAGACTGCCGCAAGACTTAAGGTGAAGGGCTTAGCCGAGCCCCCGCCGCAGATGCCAAGCATCAAACGAGAAGGCTAG

Protein

MGDQQFFLKWNDFQTNMVTSFRHLRDEKSFTDVTLACEGQTCKAHKMVLSACSPYFKSLLEENPSKHPIIILKDVSYLHLQAILEFMYAGEVNVSQEQLPAFLKTAARLKVKGLAEPPPQMPSIKREG

Description

Required, together with Trl, for maintaining the repressed state of target genes including homeotic genes Scr and Ubx. May also be involved in the activation of homeotic genes. Binds to a DNA Polycomb response element (PRE) at the bithorax complex. Also binds to polytene chromosomes at several hundred sites, many of which are shared with Trl and ph-p. Required during embryonic development.

Subunit

The BTB domain interacts with the BTB domain of Trl in vitro. Found in a Pc-containing complex.

Keywords

Activator   Chromatin regulator   Complete proteome   Developmental protein   DNA-binding   Nucleus   Reference proteome   Repressor   Transcription   Transcription regulation  

Feature

chain  Longitudinals lacking protein-like

Uniprot

A0A2W1BN94   A0A1E1W6A7   A0A2H1VHN2   S4NYI1   A0A2A4JLN0   A0A194QQA2   + More
A0A194Q5N6   A0A1E1W6Z3   A0A212FJ40   A0A0K8TPJ3   A0A1L8DCE9   A0A1B0DLC2   B4LKX2   A0A1I8N862   B4KPS9   A0A3B0JQL8   A0A0K8VRF5   A0A1A9VHT3   A0A1B0BYI2   B3MH52   B4MNW7   A0A0L0CI68   B4QBW2   A0A1W4UZQ8   B3NLQ1   A0A0A1WN22   W8BSK7   Q290M6   E1JGK7   D3TPF7   A0A034WRG0   A0A1I8PHX6   B4P4R0   Q7KRI2   B4GBM3   B4HNC9   B4J5I4   A0A336LB56   A0A1B0EX14   A0A084VEW5   T1E2M3   A0A1Q3G3B3   U5EWI5   A0A2M3Z6A4   A0A2M4AJ01   W5JCB4   B0WD71   Q1HR14   A0A182FUX1   A0A023EG49   A0A182YE86   A0A182MKP9   A0A182P352   A0A182S9V8   A0A182WDB4   A0A182UKE2   A0A182LHI5   A0A182WR77   Q7PSR6   A0A182RXM8   A0A182HG21   A0A0T6BC83   A0A182N336   A0A182QQU7   A0A2P8ZLR2   V5H442   A0A1W4WL84   D6WSB5   A0A1Y1M8W8   A0A158NLI9   A0A2J7Q672   A0A067RK65   A0A0L7RE13   A0A2A3EJB3   V9IH02   A0A0M8ZZ53   A0A087ZYN1   A0A310SKS0   A0A232EPT3   A0A195E657   F4WW12   K7J0I7   A0A0J7K0D4   E2BGK9   E2B0S2   A0A0C9RH18   A0A026WZ36   N6T1X7   E0VIL3   A0A1J1I0G0   A0A1B6LZQ2   A0A1B6H1I1   A0A1B6I059   T1DHA2   A0A195B1J4   A0A0A9WZM8   A0A2R7VSH3   A0A164V0S8   E9GZQ5   A0A0N8CHJ8  

Pubmed

28756777    23622113    26354079    22118469    26369729    17994087    + More
25315136    26108605    22936249    18057021    25830018    24495485    15632085    23185243    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20353571    25348373    17550304    11370860    12537569    12834867    12556479    24438588    24330624    20920257    23761445    17204158    17510324    24945155    25244985    20966253    12364791    14747013    17210077    29403074    18362917    19820115    28004739    21347285    24845553    28648823    21719571    20075255    20798317    24508170    30249741    23537049    20566863    25401762    26823975    21292972   

EMBL

KZ149954    PZC76532.1    GDQN01008536    JAT82518.1    ODYU01002580    SOQ40271.1    + More
GAIX01008569    JAA83991.1    NWSH01001038    PCG72985.1    KQ461181    KPJ07683.1    KQ459460    KPJ00858.1    GDQN01008294    JAT82760.1    AGBW02008312    OWR53763.1    GDAI01001535    JAI16068.1    GFDF01009941    JAV04143.1    AJVK01016372    AJVK01016373    CH940648    EDW60776.1    CH933808    EDW10206.1    OUUW01000001    SPP75646.1    GDHF01010896    JAI41418.1    JXJN01022670    CH902619    EDV35811.1    CH963848    EDW73806.1    JRES01000340    KNC32108.1    CM000362    CM002911    EDX07622.1    KMY94772.1    CH954179    EDV55026.1    KQS62067.1    KQS62068.1    GBXI01014045    GBXI01000771    JAD00247.1    JAD13521.1    GAMC01006663    GAMC01006662    GAMC01006661    JAB99893.1    CM000071    EAL25336.3    KRT02084.1    KRT02085.1    AE013599    KX531691    ACZ94458.1    AFH08155.1    AFH08156.1    AHN56359.1    ANY27501.1    CCAG010014016    EZ423309    ADD19585.1    GAKP01002606    GAKP01002605    GAKP01002604    GAKP01002603    JAC56348.1    CM000158    EDW91683.1    KRK00024.1    KRK00025.1    AF308476    AY060364    BT099722    AAG45054.1    AAL25403.1    AAM68179.1    CH479181    EDW32281.1    CH480816    EDW48411.1    CH916367    EDW00747.1    UFQS01002786    UFQT01002786    UFQT01004048    SSX14669.1    SSX34066.1    SSX35457.1    AJWK01030816    AJWK01030817    ATLV01012340    KE524783    KFB36509.1    GALA01000579    JAA94273.1    GFDL01000799    JAV34246.1    GANO01001401    JAB58470.1    GGFM01003227    MBW23978.1    GGFK01007439    MBW40760.1    ADMH02001912    GGFL01004243    ETN60530.1    MBW68421.1    DS231894    EDS44249.1    DQ440280    CH477650    ABF18313.1    EAT37796.1    EAT37797.1    GAPW01006014    GEHC01001429    JAC07584.1    JAV46216.1    AXCM01016421    AAAB01008816    EAA05153.2    APCN01005461    LJIG01001972    KRT84968.1    AXCN02001131    PYGN01000021    PSN57438.1    GALX01000893    JAB67573.1    KQ971352    EFA06617.1    GEZM01042600    GEZM01042599    GEZM01042598    JAV79767.1    ADTU01019474    NEVH01017540    PNF24072.1    KK852423    KDR24246.1    KQ414613    KOC69088.1    KZ288231    PBC31564.1    JR043445    AEY59776.1    KQ435804    KOX73056.1    KQ760243    OAD61271.1    NNAY01002906    OXU20351.1    KQ979579    KYN20653.1    GL888404    EGI61601.1    LBMM01018006    KMQ83903.1    GL448189    EFN85202.1    GL444666    EFN60744.1    GBYB01001268    GBYB01007610    GBYB01007611    JAG71035.1    JAG77377.1    JAG77378.1    KK107063    QOIP01000005    EZA61078.1    RLU22896.1    APGK01055499    KB741266    KB632194    ENN71518.1    ERL89928.1    DS235200    EEB13219.1    CVRI01000038    CRK93831.1    GEBQ01010863    JAT29114.1    GECZ01001227    JAS68542.1    GECU01027365    JAS80341.1    GAMD01002446    JAA99144.1    KQ976662    KYM78336.1    GBHO01031631    GBRD01015562    GDHC01015697    GDHC01006383    JAG11973.1    JAG50264.1    JAQ02932.1    JAQ12246.1    KK854050    PTY10299.1    LRGB01001507    KZS11852.1    GL732578    EFX75063.1    GDIP01131063    JAL72651.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000007151    UP000092462    UP000008792    + More
UP000095301    UP000009192    UP000268350    UP000078200    UP000092460    UP000007801    UP000007798    UP000037069    UP000000304    UP000192221    UP000008711    UP000001819    UP000000803    UP000092444    UP000095300    UP000002282    UP000008744    UP000001292    UP000001070    UP000092461    UP000030765    UP000000673    UP000002320    UP000008820    UP000069272    UP000076408    UP000075883    UP000075885    UP000075901    UP000075920    UP000075902    UP000075882    UP000076407    UP000007062    UP000075900    UP000075840    UP000075884    UP000075886    UP000245037    UP000192223    UP000007266    UP000005205    UP000235965    UP000027135    UP000053825    UP000242457    UP000053105    UP000005203    UP000215335    UP000078492    UP000007755    UP000002358    UP000036403    UP000008237    UP000000311    UP000053097    UP000279307    UP000019118    UP000030742    UP000009046    UP000183832    UP000078540    UP000076858    UP000000305   

PRIDE

E1JGK7    Q7KRI2   

Pfam

PF00651   BTB

Interpro

IPR011333   SKP1/BTB/POZ_sf        + More
IPR000210   BTB/POZ_dom       

SUPFAM

SSF54695   SSF54695       

ProteinModelPortal

A0A2W1BN94   A0A1E1W6A7   A0A2H1VHN2   S4NYI1   A0A2A4JLN0   A0A194QQA2   + More
A0A194Q5N6   A0A1E1W6Z3   A0A212FJ40   A0A0K8TPJ3   A0A1L8DCE9   A0A1B0DLC2   B4LKX2   A0A1I8N862   B4KPS9   A0A3B0JQL8   A0A0K8VRF5   A0A1A9VHT3   A0A1B0BYI2   B3MH52   B4MNW7   A0A0L0CI68   B4QBW2   A0A1W4UZQ8   B3NLQ1   A0A0A1WN22   W8BSK7   Q290M6   E1JGK7   D3TPF7   A0A034WRG0   A0A1I8PHX6   B4P4R0   Q7KRI2   B4GBM3   B4HNC9   B4J5I4   A0A336LB56   A0A1B0EX14   A0A084VEW5   T1E2M3   A0A1Q3G3B3   U5EWI5   A0A2M3Z6A4   A0A2M4AJ01   W5JCB4   B0WD71   Q1HR14   A0A182FUX1   A0A023EG49   A0A182YE86   A0A182MKP9   A0A182P352   A0A182S9V8   A0A182WDB4   A0A182UKE2   A0A182LHI5   A0A182WR77   Q7PSR6   A0A182RXM8   A0A182HG21   A0A0T6BC83   A0A182N336   A0A182QQU7   A0A2P8ZLR2   V5H442   A0A1W4WL84   D6WSB5   A0A1Y1M8W8   A0A158NLI9   A0A2J7Q672   A0A067RK65   A0A0L7RE13   A0A2A3EJB3   V9IH02   A0A0M8ZZ53   A0A087ZYN1   A0A310SKS0   A0A232EPT3   A0A195E657   F4WW12   K7J0I7   A0A0J7K0D4   E2BGK9   E2B0S2   A0A0C9RH18   A0A026WZ36   N6T1X7   E0VIL3   A0A1J1I0G0   A0A1B6LZQ2   A0A1B6H1I1   A0A1B6I059   T1DHA2   A0A195B1J4   A0A0A9WZM8   A0A2R7VSH3   A0A164V0S8   E9GZQ5   A0A0N8CHJ8  

PDB

4HXI     E-value=9.21592e-08,     Score=128

KEGG

101741489    no KO assigned | (RefSeq) longitudinals lacking protein-like

GO

GO:0001700   GO:0009953   GO:0003677   GO:0031519   GO:0007435   GO:0006342   GO:0007426   GO:0035167   GO:0005700   GO:0045944   GO:0042803   GO:0031208   GO:0000794   GO:0045893   GO:0005634   GO:0016458   GO:0045892   GO:0006357   GO:0005515   GO:0006012   GO:0005840   GO:0006412   GO:0005856   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Subcellular location

Nucleus  

Length:

128

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00431

Exp number, first 60 AAs:

0

Total prob of N-in:

0.09857

outside

1  -  128

 

 

Pi

243.002729

Theta

167.67396

Tajima's D

1.147697

CLR

0

CSRT

0.702464876756162

Interpretation

Uncertain