Gene

KWMTBOMO12018  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004356

Annotation

ribosomal_protein_S7_[Bombyx_mori]

Location

Bomo_Chr20(-):5618872-5622480      View in EpiBrowser

Full name

40S ribosomal protein S7      

Location in the cell

Cytoplasmic   Reliability : 1.413 Nuclear   Reliability : 2.01

CDS

ATGAGTACGAAGATCATCAAAGCGAGCGGTGCTGAGGCGGATTCCTTCGAGACCTCGATCTCGCAGGCGCTGGTCGAACTCGAAACCAACTCCGACCTCAAAGCCCAACTTCGGGAGCTTTACATTACAAAAGCTAAAGAAATTGAACTACACAATAAGAAGTCGATCATCATCTATGTGCCGATGCCTAAACTGAAGGCCTTTCAGAAGATCCAGATCAGGCTTGTCCGTGAGCTCGAAAAGAAGTTCAGTGGTAAACATGTAGTCTTTGTTGGAGACCGTAAGATCCTGCCTAAGCCCAGCCACAAAACTCGTGTTGCTAACAAACAAAAGAGGCCACGCTCAAGGACATTGACCTCTGTGTACAATGCTATCCTCGAGGACTTGGTCTTCCCTGCTGAGATCGTAGGCAAGCGCATCAGGGTCAAGTTGGACGGCTCACAGCTCATTAAGGTGCACTTAGACAAAAACCAACAGACTACTATTGAACATAAAGTGGACACCTTCCAGTCTGTATACAAGAAGCTAACGGGACGCGAAGTGACCTTCGAGTTCCCCGAACCTTATTTGTAA

Protein

MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL

Similarity

Belongs to the eukaryotic ribosomal protein eS7 family.

Keywords

Ribonucleoprotein   Ribosomal protein   Complete proteome   Reference proteome  

Feature

chain  40S ribosomal protein S7

Uniprot

Q5UAN7   P48155   A0A194QRS6   I4DII2   E7DZ26   A0A2A4AN65   + More
G3LZB1   I4DMA1   Q45FN1   Q6EV27   A0A2A4JNJ4   A0A2H1WL30   Q962S0   A0A1E1WRU3   A0A2W1BUS1   A0A2A4JLX4   A0A194Q785   Q6F470   A0A3S2NQ97   G0ZEE4   A7KCX4   S4NXE7   A0A212EYJ9   H9J4B7   A0A0K8TEL6   Q6EV01   D1M806   Q6EV00   D6WSW6   A0A1W4X8L7   A2IAD5   A0A1Y1MTH3   E9IAE5   A0A158P0Y5   F4WTX0   A0A151JY65   A0A1D1XMF7   B1NEW1   K7IMK6   A0A195AU46   A0A151WWL4   A0A151J1L1   A0A0J7K916   A0A151IM75   E1ZW62   A0A1B6CUR3   Q56FH6   J3JXV4   A0A0C9Q0C6   A0A0C9R3A6   A0A0X7YFY6   A0A026VXN0   A0A2A4JNI6   U4UAF9   A0A154PK03   N6UHN3   V9IIH3   A0A088A8A7   E0VPW5   A0A224XYU7   T1IA25   A0A069DQ79   A0A171B958   E2AEG2   Q1W285   A0A232EIR6   Q4GXT9   A0A158NKC2   A0A151WSY7   A0A0P4W236   A0A2J7PE42   U5EWE5   A0A1B6HH73   A0A1B6EHA8   A0A195EIM4   A0A146L341   A0A1Q3F7X2   D3KCZ9   A0A0A9WLN4   A0A151I1Y6   E2B4Z2   Q0IEM1   A0A023EIU5   A0A195FBE9   Q9NB21   Q0PXV1   A0A151I902   A0A1B6FTR0   F4W8M2   E9IBU3   Q6U1Z5   A0A2H8TLM6   C4WVK2   A0A336KUT4   A0A084WI45   R4FLZ3   A0A1B6G1L5   A0A2M3YX93   A0A2M3ZYN2   W5J749  

Pubmed

8630533    26354079    22651552    14668217    28756777    17603110    + More
23622113    22118469    19121390    18362917    19820115    17437641    28004739    21282665    21347285    21719571    19027836    20075255    20798317    22516182    24508170    30249741    23537049    20566863    26334808    28648823    27129103    26823975    25401762    17510324    24945155    26483478    16503479    24438588    20920257    23761445   

EMBL

AY769321    AAV34863.1    L20096    KQ461181    KPJ07685.1    AK401100    + More
BAM17722.1    HQ424729    ADT80673.1    NWMT01000205    PCC98402.1    JN582331    AEO46464.1    AK402419    BAM19041.1    DQ137845    AAZ53354.1    AJ783760    CAH04123.1    NWSH01001038    PCG72980.1    ODYU01009398    SOQ53795.1    AF400206    GDQN01001533    JAT89521.1    KZ149954    PZC76530.1    PCG72981.1    KQ459460    KPJ00860.1    AB180420    BAD26664.1    RSAL01000153    RVE45685.1    JF265022    AEL28853.1    EF207966    ABS57442.1    GAIX01014215    JAA78345.1    AGBW02011482    OWR46578.1    BABH01022156    GBRD01001809    JAG64012.1    AJ783870    CAH04318.1    GU120430    ACY71280.1    AJ783871    CAH04319.1    KQ971352    EFA06341.1    EF179449    ABM55455.1    GEZM01021488    JAV88982.1    GL762003    EFZ22466.1    ADTU01005902    GL888345    EGI62327.1    KQ981515    KYN40765.1    GDJX01024369    JAT43567.1    EF444538    ABS44870.1    KQ976738    KYM75758.1    KQ982691    KYQ52147.1    KQ980514    KYN15744.1    LBMM01011496    KMQ86794.1    KQ977086    KYN05866.1    GL434776    EFN74571.1    GEDC01020140    JAS17158.1    AY961524    AAX62426.1    BT128076    AEE63037.1    GBYB01007263    JAG77030.1    GBYB01007262    JAG77029.1    KC507304    AHB12427.1    KK107602    QOIP01000001    EZA48563.1    RLU26604.1    RLU26678.1    PCG72982.1    KB631982    ERL87591.1    KQ434938    KZC12153.1    APGK01025701    APGK01025702    KB740600    ENN80116.1    JR049374    AEY60943.1    DS235379    EEB15421.1    GFTR01003215    JAW13211.1    ACPB03005093    ACPB03005094    ACPB03005095    GBGD01003063    JAC85826.1    GEMB01000116    JAS02995.1    GL438838    EFN68173.1    DQ445542    ABD98780.1    NNAY01004164    OXU18259.1    AM048934    CAJ17172.1    ADTU01018770    KQ982762    KYQ51019.1    GDKW01000920    JAI55675.1    NEVH01026110    PNF14599.1    GANO01001450    JAB58421.1    GECU01033670    GECU01023454    JAS74036.1    JAS84252.1    GECZ01032457    JAS37312.1    KQ978881    KYN27747.1    GDHC01015695    JAQ02934.1    GFDL01011432    JAV23613.1    GU471221    ADC34227.1    GBHO01035263    JAG08341.1    KQ976588    KYM79695.1    GL445685    EFN89200.1    CH477586    EAT38624.1    JXUM01089883    GAPW01004718    GAPW01004717    KQ563803    JAC08881.1    KXJ73260.1    KQ981693    KYN37701.1    AF272670    DS231936    DQ673435    ABG82008.1    KQ978323    KYM95125.1    GECZ01016240    GECZ01013905    JAS53529.1    JAS55864.1    GL887908    EGI69513.1    GL762137    EFZ21938.1    AY380336    AAQ88428.1    GFXV01003220    MBW15025.1    ABLF02037584    AK341557    BAH71922.1    UFQS01000848    UFQT01000848    UFQT01001751    SSX07285.1    SSX27627.1    SSX31658.1    ATLV01023913    KE525347    KFB49889.1    GAHY01001193    JAA76317.1    GECZ01013443    JAS56326.1    GGFM01000133    MBW20884.1    GGFK01000346    MBW33667.1    ADMH02002040    ETN59801.1   

Proteomes

UP000053240    UP000243750    UP000218220    UP000053268    UP000283053    UP000007151    + More
UP000005204    UP000007266    UP000192223    UP000005205    UP000007755    UP000078541    UP000002358    UP000078540    UP000075809    UP000078492    UP000036403    UP000078542    UP000000311    UP000053097    UP000279307    UP000030742    UP000076502    UP000019118    UP000005203    UP000009046    UP000015103    UP000215335    UP000235965    UP000008237    UP000008820    UP000069940    UP000249989    UP000002320    UP000079169    UP000007819    UP000030765    UP000000673   

PRIDE

Q5UAN7    H9J4B7    A0A088A8A7   

Pfam

PF01251   Ribosomal_S7e        + More
PF01215   COX5B
PF02099   Josephin

Interpro

IPR000554   Ribosomal_S7e        + More
IPR036972   Cyt_c_oxidase_su5b_sf       
IPR002124   Cyt_c_oxidase_su5b       
IPR006155   Josephin       
IPR003903   UIM_dom       

Gene 3D

2.60.11.10    

CDD

cd00924  Cyt_c_Oxidase_Vb

ProteinModelPortal

Q5UAN7   P48155   A0A194QRS6   I4DII2   E7DZ26   A0A2A4AN65   + More
G3LZB1   I4DMA1   Q45FN1   Q6EV27   A0A2A4JNJ4   A0A2H1WL30   Q962S0   A0A1E1WRU3   A0A2W1BUS1   A0A2A4JLX4   A0A194Q785   Q6F470   A0A3S2NQ97   G0ZEE4   A7KCX4   S4NXE7   A0A212EYJ9   H9J4B7   A0A0K8TEL6   Q6EV01   D1M806   Q6EV00   D6WSW6   A0A1W4X8L7   A2IAD5   A0A1Y1MTH3   E9IAE5   A0A158P0Y5   F4WTX0   A0A151JY65   A0A1D1XMF7   B1NEW1   K7IMK6   A0A195AU46   A0A151WWL4   A0A151J1L1   A0A0J7K916   A0A151IM75   E1ZW62   A0A1B6CUR3   Q56FH6   J3JXV4   A0A0C9Q0C6   A0A0C9R3A6   A0A0X7YFY6   A0A026VXN0   A0A2A4JNI6   U4UAF9   A0A154PK03   N6UHN3   V9IIH3   A0A088A8A7   E0VPW5   A0A224XYU7   T1IA25   A0A069DQ79   A0A171B958   E2AEG2   Q1W285   A0A232EIR6   Q4GXT9   A0A158NKC2   A0A151WSY7   A0A0P4W236   A0A2J7PE42   U5EWE5   A0A1B6HH73   A0A1B6EHA8   A0A195EIM4   A0A146L341   A0A1Q3F7X2   D3KCZ9   A0A0A9WLN4   A0A151I1Y6   E2B4Z2   Q0IEM1   A0A023EIU5   A0A195FBE9   Q9NB21   Q0PXV1   A0A151I902   A0A1B6FTR0   F4W8M2   E9IBU3   Q6U1Z5   A0A2H8TLM6   C4WVK2   A0A336KUT4   A0A084WI45   R4FLZ3   A0A1B6G1L5   A0A2M3YX93   A0A2M3ZYN2   W5J749  

PDB

4V6W     E-value=2.4943e-70,     Score=670

KEGG

692716    K02993 small subunit ribosomal protein S7e | (RefSeq) RpS7; ribosomal protein S7

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0005840   GO:0006412   GO:0003735   GO:0042274   GO:0006364   GO:0032040   GO:0022627   GO:0004129   GO:0005740   GO:0016579   GO:0004843   GO:0005622   GO:0005856   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

PANTHER

PTHR11278  

Length:

190

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03703

Exp number, first 60 AAs:

0.00011

Total prob of N-in:

0.16460

outside

1  -  190

 

 

Pi

176.506312

Theta

150.243922

Tajima's D

1.14873

CLR

0.0176

CSRT

0.703164841757912

Interpretation

Uncertain