Silkworm Genome Informatics Database

Gene

KWMTBOMO12010

Pre Gene Modal

BGIBMGA004360

Annotation

PREDICTED:_focal_adhesion_kinase_1_[Bombyx_mori]

Location

Bomo_Chr20(-):5405036-5412430 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.003

CDS

ATGCAGGAGGACAACTTGAAAAAGAGATTGTCGAGCGTGCAGCCGTGTCCGGAGTCCGATCCCGCGCCCGCGGAGCCCCGGCCTCCCACTCAGCCCCATTCCGCGGCAAACTCCTCAGAGACAAGTCCAGCGAATACCGTTAAAGGAAGAGACAAATCGGCCAGTGACGAGAAGCGCTCCCGCAAAAGCGAGGACCCCGTGTACGTGGCGACGACGGGCGTGGTGCGCGGCGTGATGCGGCTGGCGGCGGGGGGCGCCGGGGGGCCGGGGGGGCCGGGCGGCGGGGGGCCGGGCGCCGTGCTGGGGGCCGTGCGCCACGTGGGCGCGGAGCTGAGGACGCTGTGCGGCACCGTGGACCTGCTCGTGGGGCTGTACCCGCCCGCCGCGCAGAGAGAGGTCGAAATGGCCCATCAGGTCCTGAGCAAGGACATGGCGGCGCTGGTGGAGGCCATGCGTCTCGCCATCCAGTACCACGACACCACGCTGCACCATGAGTACACCAAGAGCATGCTTGCAGCCGCCCACGTGCTGGCGATGGACGCAAAGAACCTCCTCGACGTGGTGGACTGCATCAGAGACCGACTGCCCAACATCGACTGGCGCGCCGCCCTCGCCGAGCAGCCGTCCCCGCAGCCCCAGAACCAGACCCTCACGTCGCAGAACCAAGTGTACGCGGCCCAGAGCGTCACCTTCACACCGCAAAACCCGATACTCAGTAATCAATCGTCCGTGCAAGAAGAGGAGATCCCTCCCCCGAAGCCGGACTTTAAAATCAACCAGCCCGTCACCACCAGTCAGATAGTCGTCACCGAGCACGTGCCCAAAGAGCACAGCAGTCTCCCCGCCACGTCCAATAGAGTTTCCGCCCTCATCCATAACTACAATTTGTATGGGAACGTCAGAGATCAGCACATATATGGCAACACTGAAGTCGTCCCGCTGCACCACTCCGCGTCGGTCGACGATTCCAGGATCGACGCGACGTCCACGGAGACGGTGAGGAGTCGAGTCCAGGCGATAAGCGGCAGACTCGATACGCCGCCCCTGTACTCCGTCAGCAAAAAGATGGCCGTCGATCAGAACGTCGGGCACAGCGATCAGGGGTGA

Protein

MQEDNLKKRLSSVQPCPESDPAPAEPRPPTQPHSAANSSETSPANTVKGRDKSASDEKRSRKSEDPVYVATTGVVRGVMRLAAGGAGGPGGPGGGGPGAVLGAVRHVGAELRTLCGTVDLLVGLYPPAAQREVEMAHQVLSKDMAALVEAMRLAIQYHDTTLHHEYTKSMLAAAHVLAMDAKNLLDVVDCIRDRLPNIDWRAALAEQPSPQPQNQTLTSQNQVYAAQSVTFTPQNPILSNQSSVQEEEIPPPKPDFKINQPVTTSQIVVTEHVPKEHSSLPATSNRVSALIHNYNLYGNVRDQHIYGNTEVVPLHHSASVDDSRIDATSTETVRSRVQAISGRLDTPPLYSVSKKMAVDQNVGHSDQG

Uniprot

A0A2H1VD97 A0A1E1WEC5 A0A2W1BHF3 A0A212FAB3 A0A194QFF4 A0A194QQA5 + More
A0A2A4IZB3

Pubmed

28756777 22118469 26354079

EMBL

ODYU01001925 SOQ38808.1 GDQN01005710 JAT85344.1 KZ150043 PZC74529.1 + More
AGBW02009503 OWR50672.1 KQ459053 KPJ04144.1 KQ461181 KPJ07688.1 NWSH01004533 PCG64979.1

Proteomes

UP000007151 UP000053268 UP000053240 UP000218220

Pfam

PF18038   FERM_N_2        + More
PF03623   Focal_AT
PF07714   Pkinase_Tyr
PF00373   FERM_M

Interpro

IPR020635   Tyr_kinase_cat_dom        + More
IPR005189   Focal_adhesion_kin_target_dom
IPR041784   FAK1/PYK2_FERM_C
IPR035963   FERM_2
IPR008266   Tyr_kinase_AS
IPR014352   FERM/acyl-CoA-bd_prot_sf
IPR000719   Prot_kinase_dom
IPR019749   Band_41_domain
IPR036137   Focal_adhe_kin_target_dom_sf
IPR011009   Kinase-like_dom_sf
IPR001245   Ser-Thr/Tyr_kinase_cat_dom
IPR000299   FERM_domain
IPR029071   Ubiquitin-like_domsf
IPR041390   FADK_N
IPR019748   FERM_central
IPR011993   PH-like_dom_sf

SUPFAM

SSF54236   SSF54236        + More
SSF47031   SSF47031
SSF56112   SSF56112
SSF68993   SSF68993

Gene 3D

1.20.80.10 2.30.29.30

CDD

cd14473 FERM_B-lobe
cd13190 FERM_C_FAK1

ProteinModelPortal

A0A2H1VD97 A0A1E1WEC5 A0A2W1BHF3 A0A212FAB3 A0A194QFF4 A0A194QQA5 + More
A0A2A4IZB3

PDB

3S9O E-value=8.95181e-17, Score=212

KEGG

101745942 K05725 focal adhesion kinase 1 [EC:2.7.10.2] | (RefSeq) focal adhesion kinase 1

GO

GO:0005524 GO:0007172 GO:0005925 GO:0004713 GO:0005856 GO:0004871 GO:0006468 GO:0004890 GO:0005216 GO:0043564 GO:0006418 GO:0003824

Length:

368

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.15168

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03435

outside

1 - 368

Pi

277.896662

Theta

182.908666

Tajima's D

1.952308

CLR

0.053097

CSRT

0.878006099695015

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics