Gene

KWMTBOMO12008

Pre Gene Modal

BGIBMGA004597

Annotation

Zinc_finger_DNA_binding_protein_[Operophtera_brumata]

Location

Bomo_Chr20(+):5387211-5388258      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.117

CDS

ATGAACGCTTCTTTTAGCATTGTTTCTAATGAGACACCCCAACAATCTGACAGTTTTATTCATGGCATTACGAGCTTAAAAACTGAACCCGTTACAATGGAAAGCATTAGTAAACTTTTCGATTCCAAATTATCTTTAAATTCAGCTTTTGTCTCAAACCTGCGTTCAGCCCTAAAAAAGGATATTGAAGATATAGTGGCTGTCGAAGTAGACCATGCATTGCAGCATTTTAAAAACGAATTAACGGCCACTACTGACTTCATTACTGCTGAGCAAAGGGACTTTAAATTGGCTATAGAAGACAAAGAAAAGCGTATTAAGTTTCTGGAAGCAGCACTTCTTAAAACTCAAACTGACCTTTCCAAGCTGCAGAGTCGCACAGCTACAATAGAAAAAATTTCAAGAGATTTAAATATTGAAATTCATGAAATACCTGAGAGTAGAAATGAAAATGTTTTGGATTTGTTTAAGAGACTGTGTGAATGTCTACGAGTTGTTATTTCCGATAATGACATTCGCGCCTGCCGCAGAGTAGCCAAGATGAATACTACCTCGGTTCGGCCACGAAATATCTTGGTAACGCTGTCTTCGCCGCGACTTCGCGATCAACTACTCTCAGCTGCTACGCGGTTTAATAAATCTTCCACCAATGAAAAATTGAGTACTACTCATCTGGGTATAAATGGTGAGCGCCGTAGGATTTATTTATGTGAACATCTATCACCAGATGTGAAAGAATTGCACAGCTTGGCCAGAAAATTTTGTTTTGAGAATAAATATAAGTATGTTTGGGTTCGCTTTGGCCAAATTTATATTCGTAAGGATGAACAATCTCCGGCTTTCCATGTAAAGAATTTAGACTCGTTAAATAAGTTATCTTAA

Protein

MNASFSIVSNETPQQSDSFIHGITSLKTEPVTMESISKLFDSKLSLNSAFVSNLRSALKKDIEDIVAVEVDHALQHFKNELTATTDFITAEQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPESRNENVLDLFKRLCECLRVVISDNDIRACRRVAKMNTTSVRPRNILVTLSSPRLRDQLLSAATRFNKSSTNEKLSTTHLGINGERRRIYLCEHLSPDVKELHSLARKFCFENKYKYVWVRFGQIYIRKDEQSPAFHVKNLDSLNKLS

Similarity

Belongs to the mitochondrial carrier (TC 2.A.29) family.

Uniprot

A0A0L7K2U8   A0A0L7LTI6   A0A0L7K1T2   A0A194Q9C4   A0A2A4K1S6   A0A2A4IXU4   + More
A0A2A4IUX2   A0A194QEB0   A0A0L7K3N5   A0A2H1WBH0   A0A0L7L0X6   A0A2H1VD37   A0A212EWC1   A0A2A4J0C3   A0A2A4IU35   A0A2H1W956   A0A0L7K4I6   A0A2H1VAR2   A0A0L7KTU7   A0A2A4IUU8   A0A2H1W117   A0A2A4JBL7   A0A0L7K4K4   A0A0L7KQ92   A0A2A4IZ89   A0A0L7LEU2   A0A0L7L1J8   A0A2H1VRS8   A0A2A4JC78   A0A0L7LEV4   A0A2W1BYU6   A0A2A4IYB9   A0A2H1VP34   A0A0L7K3E6   A0A2H1V294   A0A0L7KUP7   A0A2H1WYV3   A0A2H1V922   A0A2W1BT87   A0A2H1X1K9   A0A2A4IYM6   A0A0L7LG83   A0A0L7LIJ9   A0A1S3DGR2   A0A2H1V7J6   A0A0L7KQY0   A0A0L7KQ79   A0A0L7KY55   A0A194PTX1   A0A0L7L8Q5   G3E4N3   A0A0L7LF48   A0A0L7K2E3   A0A1E1W9J6   A0A0L7L7A2   A0A0L7LLD5   A0A2H1X1G7   A0A2H1WNV1   A0A0L7K2C3   A0A0L7K351   A0A0L7LQ84   A0A0L7LF31   A0A0A9WQ01   A0A0L7KQ85   A0A0L7LS11   A0A194R4A1   A0A0L7LU57  

Pubmed

26227816    26354079    22118469    28756777    21815956    25401762    + More

EMBL

JTDY01013334    JTDY01001687    KOB52155.1    KOB73157.1    JTDY01000136    KOB78669.1    + More
JTDY01018098    KOB51825.1    KQ459252    KPJ02103.1    NWSH01000267    PCG77878.1    NWSH01005418    PCG64228.1    NWSH01006948    PCG63178.1    KQ459054    KPJ03878.1    JTDY01012405    KOB52279.1    ODYU01007238    SOQ49844.1    JTDY01003733    KOB69075.1    ODYU01001881    SOQ38706.1    AGBW02012032    OWR45776.1    NWSH01004587    PCG64890.1    NWSH01007563    PCG62908.1    ODYU01007128    SOQ49629.1    JTDY01010989    KOB57786.1    ODYU01001557    SOQ37940.1    JTDY01005854    KOB66545.1    NWSH01007173    PCG63054.1    ODYU01005672    SOQ46768.1    NWSH01002191    PCG68944.1    KOB57787.1    JTDY01007401    KOB65231.1    NWSH01004298    PCG65247.1    JTDY01001361    KOB74078.1    JTDY01003535    KOB69383.1    ODYU01004037    SOQ43507.1    NWSH01002032    PCG69366.1    JTDY01001411    KOB73935.1    KZ149914    PZC78000.1    NWSH01005479    PCG64170.1    ODYU01003592    SOQ42557.1    JTDY01014577    KOB52017.1    ODYU01000349    SOQ34960.1    JTDY01005451    KOB66988.1    ODYU01012049    SOQ58146.1    ODYU01001291    SOQ37301.1    KZ150018    PZC74943.1    ODYU01012701    SOQ59142.1    NWSH01004492    PCG65047.1    JTDY01001253    KOB74394.1    JTDY01000933    KOB75388.1    ODYU01001084    SOQ36825.1    JTDY01006800    KOB65678.1    JTDY01007545    KOB65124.1    JTDY01004426    KOB68173.1    KQ459592    KPI96861.1    JTDY01002188    KOB71918.1    HQ585015    AEM44816.1    JTDY01001455    KOB73826.1    JTDY01015045    KOB51976.1    GDQN01007376    JAT83678.1    JTDY01006475    JTDY01002579    KOB65982.1    KOB71161.1    JTDY01000684    KOB76235.1    ODYU01012716    SOQ59161.1    ODYU01009977    SOQ54751.1    JTDY01017795    JTDY01002629    KOB51833.1    KOB71066.1    JTDY01013746    KOB52104.1    JTDY01000399    KOB77361.1    JTDY01001364    KOB74072.1    GBHO01033077    JAG10527.1    JTDY01007115    KOB65452.1    JTDY01000700    JTDY01000218    KOB76170.1    KOB78232.1    KQ460779    KPJ12349.1    JTDY01000093    KOB78914.1   

Proteomes

UP000037510    UP000053268    UP000218220    UP000007151    UP000079169    UP000053240    + More

Pfam

PF03258   Baculo_FP        + More
PF00153   Mito_carr
PF00005   ABC_tran
PF00628   PHD
PF14529   Exo_endo_phos_2

Interpro

IPR004941   Baculo_FP        + More
IPR004244   Transposase_22       
IPR011011   Znf_FYVE_PHD       
IPR019787   Znf_PHD-finger       
IPR013083   Znf_RING/FYVE/PHD       
IPR019786   Zinc_finger_PHD-type_CS       
IPR001965   Znf_PHD       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR002067   Mit_carrier       
IPR018108   Mitochondrial_sb/sol_carrier       
IPR023395   Mt_carrier_dom_sf       
IPR003593   AAA+_ATPase       
IPR026082   ABCA       
IPR003439   ABC_transporter-like       
IPR027417   P-loop_NTPase       
IPR005135   Endo/exonuclease/phosphatase       

SUPFAM

SSF57903   SSF57903        + More
SSF56219   SSF56219       
SSF103506   SSF103506       
SSF52540   SSF52540       

Gene 3D

3.30.40.10     3.60.10.10     1.50.40.10    

ProteinModelPortal

A0A0L7K2U8   A0A0L7LTI6   A0A0L7K1T2   A0A194Q9C4   A0A2A4K1S6   A0A2A4IXU4   + More
A0A2A4IUX2   A0A194QEB0   A0A0L7K3N5   A0A2H1WBH0   A0A0L7L0X6   A0A2H1VD37   A0A212EWC1   A0A2A4J0C3   A0A2A4IU35   A0A2H1W956   A0A0L7K4I6   A0A2H1VAR2   A0A0L7KTU7   A0A2A4IUU8   A0A2H1W117   A0A2A4JBL7   A0A0L7K4K4   A0A0L7KQ92   A0A2A4IZ89   A0A0L7LEU2   A0A0L7L1J8   A0A2H1VRS8   A0A2A4JC78   A0A0L7LEV4   A0A2W1BYU6   A0A2A4IYB9   A0A2H1VP34   A0A0L7K3E6   A0A2H1V294   A0A0L7KUP7   A0A2H1WYV3   A0A2H1V922   A0A2W1BT87   A0A2H1X1K9   A0A2A4IYM6   A0A0L7LG83   A0A0L7LIJ9   A0A1S3DGR2   A0A2H1V7J6   A0A0L7KQY0   A0A0L7KQ79   A0A0L7KY55   A0A194PTX1   A0A0L7L8Q5   G3E4N3   A0A0L7LF48   A0A0L7K2E3   A0A1E1W9J6   A0A0L7L7A2   A0A0L7LLD5   A0A2H1X1G7   A0A2H1WNV1   A0A0L7K2C3   A0A0L7K351   A0A0L7LQ84   A0A0L7LF31   A0A0A9WQ01   A0A0L7KQ85   A0A0L7LS11   A0A194R4A1   A0A0L7LU57  

KEGG

NA   

GO

GO:0046872   GO:0016021   GO:0022857   GO:0042626   GO:0005524  

PANTHER

PTHR11505   PTHR19229  

Length:

293

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02217

outside

1  -  293

 

 

Pi

422.618799

Theta

207.705546

Tajima's D

3.25737

CLR

0

CSRT

0.988500574971251

Interpretation

Possibly Balancing Selection