Gene

KWMTBOMO12005

Pre Gene Modal

BGIBMGA004362

Annotation

Uncharacterized_protein_OBRU01_00296_[Operophtera_brumata]

Location

Bomo_Chr20(-):5339367-5340200      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.202

CDS

ATGACTTCCGCATCATCCAGTAGCGCTAGGAATTTGTTCGCGGAGTCCAAACAAAGGCTCGCTGAAAGAGTGCAAGTGAATATGAACAATATTTCGTCGTTGGCGAGACAAATTCAGAGAGGTTCTAAATCTAATGAGCTGTTAACAAAAGCAGCAAGAGAAATGGCATCAACAGAACATCAGATTGAAACCAGTGAGGAAAATTTGAAGAAGATGCAATTAATAGCAGTCCACATTGGATATCAATTTGAAAACATTCATAAGTCTGCAAAAATGCTGACAGAAATAAATGAACAAATTACAGCTATGCAAAGATGA

Protein

MTSASSSSARNLFAESKQRLAERVQVNMNNISSLARQIQRGSKSNELLTKAAREMASTEHQIETSEENLKKMQLIAVHIGYQFENIHKSAKMLTEINEQITAMQR

Uniprot

H9J4C3   A0A2H1WS20   A0A2A4JI82   A0A2W1BCR0   A0A1E1WC16   A0A3S2NEV8   + More
S4PD09   A0A0L7LUX7   A0A212FAA7   A0A194QQA9   A0A194QF26   D6WR84   A0A195BS30   A0A158NQI8   A0A195EQQ1   V5H4Y7   A0A195DHU5   A0A026VZN8   A0A151XB27   A0A1B6L1Q6   A0A1B6JZC6   A0A1B6G409   A0A1Y1KQW4   A0A195D3S4   A0A1Y1KRK3   A0A3L8DH68   A0A0K8TNA9   A0A088A8X6   F4WKC0   E2AFG0   A0A154PMY1   T1H0Q3   Q174W1   A0A023ECW5   E2BIQ8   A0A182X6P8   A0A182YL35   A0A2C9GQD5   A0A182K745   Q7PZ54   B4PA52   A0A1B6DYN9   A0A182NPR0   A0A182WEB9   A0A182P6X0   B3NJQ3   B0X7E0   A0A084VIM4   A0A182TCK8   A0A1B0CFD7   A0A1Q3FB19   A0A0C9QKB6   A0A2A3E5I9   A0A336LZQ7   A0A2P6L2T8   A0A1J1IHC8   A0A182MN62   A0A0V0GD45   D5J702   W5JEB9   A0A2M4AYX6   E0VED9   U5EJS5   B4QF18   N6TV91   A1ZBV5   B4HQ90   A0A182TIT0   A0A2L2YI75   A0A182V2K7   A0A1B0GQG1   B7QFT8   A0A182QA97   A0A069DVE6   A0A1L8DCQ8   R4FML6   A0A1W4VHF3   B3MH66   A0A1A9XEC8   A0A1A9ZBI1   T1JJ24   A0A0K8US61   A0A1B0GBJ2   B4KPJ9   A0A034WEE9   W8C8Z5   B4J5J5   B4LKY3   A0A0K8VX71   A0A0C9SA53   A0A0K8VRJ1   A0A131YU71   A0A0A1WU49   A0A3B0J1X6   A0A1A9W0U3   A0A2R7WFV1   B5DZ60   B4GI83   A0A0L0CKR4   B4MKE1  

Pubmed

19121390    28756777    23622113    26227816    22118469    26354079    + More
18362917    19820115    21347285    24508170    28004739    30249741    26369729    21719571    20798317    17510324    24945155    26483478    25244985    12364791    14747013    17210077    17994087    17550304    24438588    20372963    20920257    23761445    20566863    22936249    23537049    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26561354    26334808    25348373    24495485    26131772    26830274    25830018    15632085    26108605    18057021   

EMBL

BABH01022135    ODYU01010610    SOQ55838.1    NWSH01001376    PCG71476.1    KZ150464    + More
PZC70786.1    GDQN01006653    JAT84401.1    RSAL01000153    RVE45691.1    GAIX01003846    JAA88714.1    JTDY01000033    KOB79283.1    AGBW02009503    OWR50676.1    KQ461181    KPJ07692.1    KQ459053    KPJ04148.1    KQ971354    EFA07676.1    KQ976419    KYM89319.1    ADTU01023338    KQ982021    KYN30538.1    GALX01000593    JAB67873.1    KQ980824    KYN12473.1    KK107648    EZA48349.1    KQ982335    KYQ57498.1    GEBQ01022406    JAT17571.1    GECU01003159    JAT04548.1    GECZ01019486    GECZ01012648    JAS50283.1    JAS57121.1    GEZM01078260    JAV62811.1    KQ976885    KYN07560.1    GEZM01078264    GEZM01078263    GEZM01078262    GEZM01078261    JAV62810.1    QOIP01000008    RLU19784.1    GDAI01001744    JAI15859.1    GL888199    EGI65344.1    GL439108    EFN67853.1    KQ434996    KZC13226.1    CAQQ02166999    CH477405    EAT41603.1    JXUM01008483    JXUM01094554    GAPW01006360    KQ564136    KQ560262    JAC07238.1    KXJ72706.1    KXJ83483.1    GL448525    EFN84423.1    APCN01002389    AAAB01008986    EAA00045.1    CM000158    EDW91383.1    GEDC01024776    GEDC01006505    GEDC01004285    JAS12522.1    JAS30793.1    JAS33013.1    CH954179    EDV55322.1    DS232448    EDS41890.1    ATLV01013369    KE524854    KFB37818.1    AJWK01010005    AJWK01010006    GFDL01010333    JAV24712.1    GBYB01001052    JAG70819.1    KZ288379    PBC26552.1    UFQT01000239    UFQT01000860    SSX22229.1    SSX27670.1    MWRG01002249    PRD32892.1    CVRI01000051    CRK99627.1    AXCM01005640    GECL01000059    JAP06065.1    GU170897    ADF28523.1    ADMH02001629    ETN61693.1    GGFK01012682    MBW46003.1    DS235090    EEB11745.1    GANO01002121    JAB57750.1    CM000362    CM002911    EDX07929.1    KMY95282.1    APGK01053537    KB741224    KB631749    ENN72316.1    ERL85749.1    AE013599    AY069123    AAF57456.1    AFX81739.1    CH480816    EDW48715.1    IAAA01020396    LAA07833.1    AJVK01007209    ABJB010313462    DS927877    EEC17710.1    AXCN02001663    GBGD01003605    JAC85284.1    GFDF01009836    JAV04248.1    ACPB03000923    GAHY01000938    JAA76572.1    CH902619    EDV35825.1    JH431432    GDHF01022893    JAI29421.1    CCAG010014016    CH933808    EDW10195.1    GAKP01005883    JAC53069.1    GAMC01002620    GAMC01002619    GAMC01002618    JAC03937.1    CH916367    EDW00758.1    CH940648    EDW60787.1    GDHF01008838    JAI43476.1    GBZX01002813    JAG89927.1    GDHF01010817    JAI41497.1    GEDV01006861    JAP81696.1    GBXI01012156    GBXI01011950    JAD02136.1    JAD02342.1    OUUW01000001    SPP72893.1    KK854691    PTY17940.1    CM000071    EDY69159.1    CH479183    EDW36203.1    JRES01000264    KNC32855.1    CH963846    EDW72580.1    EDW72584.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000037510    UP000007151    UP000053240    + More
UP000053268    UP000007266    UP000078540    UP000005205    UP000078541    UP000078492    UP000053097    UP000075809    UP000078542    UP000279307    UP000005203    UP000007755    UP000000311    UP000076502    UP000015102    UP000008820    UP000069940    UP000249989    UP000008237    UP000076407    UP000076408    UP000075840    UP000075881    UP000007062    UP000002282    UP000075884    UP000075920    UP000075885    UP000008711    UP000002320    UP000030765    UP000075901    UP000092461    UP000242457    UP000183832    UP000075883    UP000000673    UP000009046    UP000000304    UP000019118    UP000030742    UP000000803    UP000001292    UP000075902    UP000092462    UP000001555    UP000075886    UP000015103    UP000192221    UP000007801    UP000092443    UP000092445    UP000092444    UP000009192    UP000001070    UP000008792    UP000268350    UP000091820    UP000001819    UP000008744    UP000037069    UP000007798   

PRIDE

H9J4C3   

Pfam

PF16088   BORCS7        + More
PF12937   F-box-like
PF13878   zf-C2H2_3
PF13880   Acetyltransf_13

Interpro

IPR032143   BORCS7        + More
IPR001810   F-box_dom       
IPR032675   LRR_dom_sf       
IPR036047   F-box-like_dom_sf       
IPR028005   AcTrfase_ESCO_Znf_dom       
IPR016181   Acyl_CoA_acyltransferase       
IPR033257   Eco1/CTF7       
IPR028009   ESCO_Acetyltransf_dom       

SUPFAM

SSF81383   SSF81383        + More
SSF55729   SSF55729       

Gene 3D

3.80.10.10    

ProteinModelPortal

H9J4C3   A0A2H1WS20   A0A2A4JI82   A0A2W1BCR0   A0A1E1WC16   A0A3S2NEV8   + More
S4PD09   A0A0L7LUX7   A0A212FAA7   A0A194QQA9   A0A194QF26   D6WR84   A0A195BS30   A0A158NQI8   A0A195EQQ1   V5H4Y7   A0A195DHU5   A0A026VZN8   A0A151XB27   A0A1B6L1Q6   A0A1B6JZC6   A0A1B6G409   A0A1Y1KQW4   A0A195D3S4   A0A1Y1KRK3   A0A3L8DH68   A0A0K8TNA9   A0A088A8X6   F4WKC0   E2AFG0   A0A154PMY1   T1H0Q3   Q174W1   A0A023ECW5   E2BIQ8   A0A182X6P8   A0A182YL35   A0A2C9GQD5   A0A182K745   Q7PZ54   B4PA52   A0A1B6DYN9   A0A182NPR0   A0A182WEB9   A0A182P6X0   B3NJQ3   B0X7E0   A0A084VIM4   A0A182TCK8   A0A1B0CFD7   A0A1Q3FB19   A0A0C9QKB6   A0A2A3E5I9   A0A336LZQ7   A0A2P6L2T8   A0A1J1IHC8   A0A182MN62   A0A0V0GD45   D5J702   W5JEB9   A0A2M4AYX6   E0VED9   U5EJS5   B4QF18   N6TV91   A1ZBV5   B4HQ90   A0A182TIT0   A0A2L2YI75   A0A182V2K7   A0A1B0GQG1   B7QFT8   A0A182QA97   A0A069DVE6   A0A1L8DCQ8   R4FML6   A0A1W4VHF3   B3MH66   A0A1A9XEC8   A0A1A9ZBI1   T1JJ24   A0A0K8US61   A0A1B0GBJ2   B4KPJ9   A0A034WEE9   W8C8Z5   B4J5J5   B4LKY3   A0A0K8VX71   A0A0C9SA53   A0A0K8VRJ1   A0A131YU71   A0A0A1WU49   A0A3B0J1X6   A0A1A9W0U3   A0A2R7WFV1   B5DZ60   B4GI83   A0A0L0CKR4   B4MKE1  

KEGG

101741196    K20821 BLOC-1 related complex subunit 7 | (RefSeq) uncharacterized LOC101741196

GO

PANTHER

PTHR31397   PTHR45884:SF2  

Length:

105

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00013

Exp number, first 60 AAs:

0

Total prob of N-in:

0.44945

outside

1  -  105

 

 

Pi

142.34948

Theta

140.504461

Tajima's D

0.041264

CLR

63.925321

CSRT

0.379031048447578

Interpretation

Uncertain