Gene

KWMTBOMO12002

Pre Gene Modal

BGIBMGA004365

Annotation

A_disintegrin_and_metalloproteinase_with_thrombospondin_motifs_like_precursor_[Bombyx_mori]

Location

Bomo_Chr20(-):5135312-5191052      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.215

CDS

ATGACAATAGATGAGCTTCGGAACGTCTTCCATGTCGAGCACCACAGCAGAGTACCAGAGTACCACCTGGTTCAGCTCACACATCACTTGGCCAGAAGGAATATACCCACTTCTCACCCAGCGAACTCGAACAGCGCCGATTCAGGAAAGACCCCCCATTTAAAAACCGAAAAAGTCACTAAAGGTGGGTACAAGGCCCCCTCTTTGCTCAATGACGAGATGTTTGTCGAAGCAAAGAAGCGTATCGAAGATGTAGATATCATGGGAGATCCTAATAGTACAGTTAGTGTGGACTTCAAAGTTCAATCTAGTGAATTTGGTGATAGTGAATCATTGAGTGATAAAGAACATTCTGCCGAGAGTCAAGAAGATGGTGTACATAAGATCGACTTGGAGGCGTTCGGGAGGCAGCTGAAGCTAGTCCTGAAGAAGCAGGAAGGTTTAATCAAGAAAGACGGGTTGAAGGTGTGGAAAGCTTTGAAAAATGAAACCCAGCCTCATGGTGTAGATTATGAAGAAATGATTACGGAAGATGATGAAGAATTCGGTGATCTGTATCAGGACGAAGAGAACGGAGCCGCCCTGTTGATACGACGGCATCCTAAACATGGAAAACTAGTGGTGGAGGGCTCGATCGGTCACGATCTCGTTATAAGGCCGATTCCTGACACGATGACGTCACCCGCGCAAGACGATGAGATGTTCATGGACCCCTCGAGCATGGCCGACATGGTCTCCATAGACACCGGACTGCCTATTATGAAAAGAAAAAAAGAAGAACAAGACAGACTACAGGAGGCCCTTAACGGAGCCCAACACGTTATCATCAAACGGGATCCTGCGGAAGTTGACCACATGAGTGACTATGCATTCATGGAGCCTGACCACATTGGCAAGAGGTACAGGCGGAAGAGATCGGCGGAGGCTCATAATCGACAGAAACGCGAGGCGCCTTATGTTATATACCCCGAGATATTGGTCATTGTTGATTATGACGGGTACAGGTTACACGGCGGCGACAACGTGCAGATCAAACGTTATTTCGTATCGTTTTGGAACGGAGTCGATTTGAGGTACAAACTGCTGAAGGGGCCAAGGATAAGGATATCTATAGCTGGTATCATAATTTCAAGGGGTCGGGATGCCACACCTTACCTCGAGAGGAACAGAGTAGGTCGGGATGCCATCGACTCTGCTGCAGCTCTGACCGACATGGGCAAGTATCTGTTCAGAGAGAGGCGGCTGCCCGTCTACGATATTGCCGTTGCGATCACCAAACTTGACATGTGCAGAAGGCAATACGCGAACGATGCCTGCAATAGAGGGACAGCAGGTTTTGCTTACGTGGGAGGAGCTTGCGTTGTGAACAAGAGATTAGAAAAGGTCAATTCAGTAGCCATCATCGAAGACACTGGTGGTTTTTCTGGTATCATCGTGGCTGCTCACGAAGTTGGACATTTGTTAGGAGCGGTCCATGACGGCAGTCCTCCGCCTTCGTATCTCGGTGGTCCAGGCGCCGAGAAGTGCCGGTGGGAAGACGGCTTCATCATGTCTGATTTGAGACACACTGAGAAGGGGTTCAGATGGTCGCCGTGCAGTGTGCAGAGTTTCCACCACTTTTTAAATGGGGACACAGCGACTTGCCTATACAACTCTCCGCATGAAGATGACTCTTTGCCGCGAGTGTTGCCTGGTCGTCTCCTTACCCTGGACGCTCAGTGCCGGAAGGACAGAGGCACCAGTGCGTGTTTCAAGGATGAGCGAGTGTGCGCTCAGCTGTTCTGTTTCGACGCGGGTAGCGGGTACTGCGTGGCGTACCGGCCCGCCGCCGAGGGCTCGCCTTGCGGGGACGGACAGTACTGCATCAACGGCCAGTGTATAACTGAACACGAGAATATAATTCCGGATTATTCTCAGCACACGCCCAGCTACGTTCGTCCCGAGACGAGTCCATTCTACGCGAATATTACTAGCCACGAAGCGACCACACAAGCATTCGCGCCAAGTAACACACCTAGTCAATACACAAACTACAAGCCAACGAGCGGACCTAGTCCCACAACCGAGGACGCCTTCAAGTACTACTTGTCGACTAGGAAACAGTCGTACTTTGACAAGACGTCAAAACCATACGAATACTACACACAGAAGCCGAACACCTACCCACCGTCAATAAACAAATACTCCATAACGTCCACGAAGAATCCTTACGACTTCAAAGATTTCGCAACGCCTCCGCCCAAAACCGAGGACACCAGCAAAAGGGGTTTCTACAATAGAGACGAATTCGACAATTACTTTGGACGTTCGACAACGAAAAGCTACCAGGACAAGGCGGTGAAGTCTGTCTTCAAATTCGGAACGTACTACTCGCAAAAGTCGAGCGATAACTCAATACGTCCGGACGCGAATTCGCAACAAGTACAAATCGAACCGGCGCGACTGGTGCTCTCGTATCAAAGGAACCTCACCGCCGGCGAATTAGCGAGACTGTAA

Protein

MTIDELRNVFHVEHHSRVPEYHLVQLTHHLARRNIPTSHPANSNSADSGKTPHLKTEKVTKGGYKAPSLLNDEMFVEAKKRIEDVDIMGDPNSTVSVDFKVQSSEFGDSESLSDKEHSAESQEDGVHKIDLEAFGRQLKLVLKKQEGLIKKDGLKVWKALKNETQPHGVDYEEMITEDDEEFGDLYQDEENGAALLIRRHPKHGKLVVEGSIGHDLVIRPIPDTMTSPAQDDEMFMDPSSMADMVSIDTGLPIMKRKKEEQDRLQEALNGAQHVIIKRDPAEVDHMSDYAFMEPDHIGKRYRRKRSAEAHNRQKREAPYVIYPEILVIVDYDGYRLHGGDNVQIKRYFVSFWNGVDLRYKLLKGPRIRISIAGIIISRGRDATPYLERNRVGRDAIDSAAALTDMGKYLFRERRLPVYDIAVAITKLDMCRRQYANDACNRGTAGFAYVGGACVVNKRLEKVNSVAIIEDTGGFSGIIVAAHEVGHLLGAVHDGSPPPSYLGGPGAEKCRWEDGFIMSDLRHTEKGFRWSPCSVQSFHHFLNGDTATCLYNSPHEDDSLPRVLPGRLLTLDAQCRKDRGTSACFKDERVCAQLFCFDAGSGYCVAYRPAAEGSPCGDGQYCINGQCITEHENIIPDYSQHTPSYVRPETSPFYANITSHEATTQAFAPSNTPSQYTNYKPTSGPSPTTEDAFKYYLSTRKQSYFDKTSKPYEYYTQKPNTYPPSINKYSITSTKNPYDFKDFATPPPKTEDTSKRGFYNRDEFDNYFGRSTTKSYQDKAVKSVFKFGTYYSQKSSDNSIRPDANSQQVQIEPARLVLSYQRNLTAGELARL

Uniprot

Q5W7F3   A0A2A4KB78   A0A2A4KA92   A0A212FJI4   A0A194QQB5   A0A194QF31   + More
A0A2A4KAS1   A0A2H1WR30   A0A1Y1MQZ3   A0A1Y1MUE2   A0A1Y1MUG4   A0A1Y1MR09   E0VTL9   A0A139WEF8   A0A087ZQA1   A0A0L7QUU9   A0A310SJF8   A0A2A3EG91   A0A1B6JFG4   A0A158N9J5   E9IW64   A0A1Q3FZA8   A0A1Q3FZB4   Q5TML7   A0A023EVS6   A0A1B6L5X4   U4UCE8   A0A2J7PL29   A0A1D2NFS3   A0A067RGY6   A0A2J7PL32   B4MYD0   A0A0K8VWC7   A0A0K8W1U8   B4PA62   B4QAZ0   B7YZP6   A0A0K8VQF2   A0A034V7S5   A0A0P8Y920   B4LM86   A0A0J9RJY3   A0A1B0G7P6   B3ME75   A0A1I8NZP4   A0A034V501   A0A0J9U9I7   Q9W1J9   A0A3B0J7P1   A0A0K8WBN8   A0A0P8XLT1   W8AMA0   A0A1W4V023   A0A0Q9W4L4   A0A0P9ABZ2   A0A0K8UVH0   B4KNM5   Q2MGN5   A0A0P8XLU3   A0A0P8XLY8   A0A0J9RJT0   A0A0R3NQ15   B4GBL4   A0A034V2V2   A0A0Q9W4A7   A0A0B4KFG8   A0A0Q9WEA5   B5DZ02   A0A0J9RKX5   T1PBV7   A0A1W4V1B0  

Pubmed

15898116    22118469    26354079    28004739    20566863    18362917    + More
19820115    21347285    21282665    12364791    24945155    23537049    27289101    24845553    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    25348373    18057021    22936249    26109357    26109356    24495485    15632085   

EMBL

AB194271    BAD69560.1    NWSH01000004    PCG81000.1    PCG80999.1    AGBW02008264    + More
OWR53896.1    KQ461181    KPJ07697.1    KQ459053    KPJ04153.1    PCG80998.1    ODYU01010422    SOQ55513.1    GEZM01023965    JAV88102.1    GEZM01023967    JAV88100.1    GEZM01023962    JAV88105.1    GEZM01023964    GEZM01023963    JAV88104.1    DS235767    EEB16694.1    KQ971354    KYB26314.1    KQ414731    KOC62408.1    KQ766333    OAD53710.1    KZ288254    PBC30730.1    GECU01009670    JAS98036.1    ADTU01009669    ADTU01009670    ADTU01009671    GL766449    EFZ15199.1    GFDL01002144    JAV32901.1    GFDL01002140    JAV32905.1    AAAB01008986    EAL38880.3    GAPW01000401    JAC13197.1    GEBQ01020911    JAT19066.1    KB632046    ERL88271.1    NEVH01024527    PNF17037.1    LJIJ01000063    ODN03816.1    KK852513    KDR22288.1    PNF17038.1    CH963894    EDW77119.2    GDHF01009469    JAI42845.1    GDHF01007202    JAI45112.1    CM000158    EDW92388.2    CM000362    EDX08427.1    AE013599    ACL83199.1    GDHF01011207    GDHF01008757    GDHF01008714    JAI41107.1    JAI43557.1    JAI43600.1    GAKP01021354    JAC37598.1    CH902619    KPU75681.1    CH940648    EDW60964.2    KRF79683.1    KRF79685.1    CM002911    KMY96112.1    CCAG010016889    EDV35470.2    GAKP01021357    GAKP01021355    GAKP01021353    GAKP01021352    JAC37599.1    KMY96110.1    BT126278    AAF47059.2    AEB39639.1    OUUW01000001    SPP75942.1    GDHF01003850    JAI48464.1    KPU75679.1    GAMC01019489    GAMC01019487    GAMC01019485    GAMC01019483    GAMC01019482    JAB87072.1    KRF79686.1    KPU75678.1    GDHF01021791    GDHF01010657    JAI30523.1    JAI41657.1    CH933808    EDW10010.2    AAZ93569.2    KPU75677.1    KPU75680.1    KMY96111.1    CM000071    KRT01439.1    CH479181    EDW31309.1    GAKP01021356    GAKP01021351    JAC37596.1    KRF79682.1    AGB93687.1    KRF79684.1    EDY68682.3    KMY96109.1    KA646164    AFP60793.1   

Proteomes

UP000218220    UP000007151    UP000053240    UP000053268    UP000009046    UP000007266    + More
UP000005203    UP000053825    UP000242457    UP000005205    UP000007062    UP000030742    UP000235965    UP000094527    UP000027135    UP000007798    UP000002282    UP000000304    UP000000803    UP000007801    UP000008792    UP000092444    UP000095300    UP000268350    UP000192221    UP000009192    UP000001819    UP000008744   

PRIDE

Q5W7F3    Q9W1J9   

Pfam

PF17771   ADAM_CR_2

Interpro

IPR024079   MetalloPept_cat_dom_sf        + More
IPR041645   ADAM_CR_2       
IPR034030   ZnMc_salivary_gland_MPs       
IPR001590   Peptidase_M12B       
IPR006586   ADAM_Cys-rich       

Gene 3D

3.40.390.10    

CDD

cd04272  ZnMc_salivary_gland_MPs

ProteinModelPortal

Q5W7F3   A0A2A4KB78   A0A2A4KA92   A0A212FJI4   A0A194QQB5   A0A194QF31   + More
A0A2A4KAS1   A0A2H1WR30   A0A1Y1MQZ3   A0A1Y1MUE2   A0A1Y1MUG4   A0A1Y1MR09   E0VTL9   A0A139WEF8   A0A087ZQA1   A0A0L7QUU9   A0A310SJF8   A0A2A3EG91   A0A1B6JFG4   A0A158N9J5   E9IW64   A0A1Q3FZA8   A0A1Q3FZB4   Q5TML7   A0A023EVS6   A0A1B6L5X4   U4UCE8   A0A2J7PL29   A0A1D2NFS3   A0A067RGY6   A0A2J7PL32   B4MYD0   A0A0K8VWC7   A0A0K8W1U8   B4PA62   B4QAZ0   B7YZP6   A0A0K8VQF2   A0A034V7S5   A0A0P8Y920   B4LM86   A0A0J9RJY3   A0A1B0G7P6   B3ME75   A0A1I8NZP4   A0A034V501   A0A0J9U9I7   Q9W1J9   A0A3B0J7P1   A0A0K8WBN8   A0A0P8XLT1   W8AMA0   A0A1W4V023   A0A0Q9W4L4   A0A0P9ABZ2   A0A0K8UVH0   B4KNM5   Q2MGN5   A0A0P8XLU3   A0A0P8XLY8   A0A0J9RJT0   A0A0R3NQ15   B4GBL4   A0A034V2V2   A0A0Q9W4A7   A0A0B4KFG8   A0A0Q9WEA5   B5DZ02   A0A0J9RKX5   T1PBV7   A0A1W4V1B0  

PDB

2V4B     E-value=3.81682e-19,     Score=236

KEGG

692481    no KO assigned | (RefSeq) Adamts-like; A disintegrin and metalloproteinase with thrombospondin motif

GO

GO:0007229   GO:0004222   GO:0005615   GO:0005798   GO:0061357   GO:0005768   GO:0048737   GO:0008237   GO:0006508   GO:0005634   GO:0016422   GO:0004890   GO:0005216   GO:0043564   GO:0006418   GO:0003824  

Length:

831

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000590000000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00006

outside

1  -  831

 

 

Pi

232.726404

Theta

175.900189

Tajima's D

1.195692

CLR

0.176902

CSRT

0.712864356782161

Interpretation

Uncertain